RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 CA5AP35218 305 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 CLK3P49761 638 aaKnown RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 SPATS1Q496A3 300 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 FNDC3BQ53EP0 1204 aaKnown RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 ZNF691Q5VV52 312 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 UHRF1Q96T88 793 aaPredicted RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 TRIT1Q9H3H1 467 aaKnown RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 CPNE5Q9HCH3 593 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 KCNE2Q9Y6J6 123 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 H3BM21 787 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 ERAL1O75616 437 aaKnown RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 CXCL10P02778 98 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 SPAM1P38567 509 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 ZNF45Q02386 682 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 TARDBPQ13148 414 aaKnown RBP eCLIP12.88□□□□□ -0.35
PEX1-201ENST00000248633 DUOXA1Q1HG43 343 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 CD300LGQ6UXG3 332 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 CEP68Q76N32 757 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 GET4Q7L5D6 327 aaPredicted RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 GRASPQ7Z6J2 395 aaPredicted RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 LAPTM4BQ86VI4 370 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 TCEAL8Q8IYN2 117 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 CD200R1Q8TD46 325 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 GTF2H4Q92759 462 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 SLC22A4Q9H015 551 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 OSGEPL1Q9H4B0 414 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 ZNF224Q9NZL3 707 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 AGAP5A6NIR3 686 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 FAM47E-STBD1D6RA91 191 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 MUSKO15146 869 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 GRM6O15303 877 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 SLITRK5O94991 958 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 PRPS1L1P21108 318 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 FCHO2Q0JRZ9 810 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 ATP13A5Q4VNC0 1218 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 LCN1P1Q5VSP4 162 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 TIGD4Q8IY51 512 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 CLP1Q92989 425 aaKnown RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 FNDC11Q9BVV2 318 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 ACSL6Q9UKU0 697 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 FAM92AA1XBS5 289 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 TSPAN4O14817 238 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 TGFB1P01137 390 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 PIM1P11309 404 aaPredicted RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 BMPR1AP36894 532 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 RGRP47804 291 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 MANFP55145 182 aaKnown RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 POLR2LP62875 67 aaKnown RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 HSPB3Q12988 150 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 GRIK2Q13002 908 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 HNRNPA0Q13151 305 aaKnown RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 CATSPEREQ5SY80 951 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 METTL3Q86U44 580 aaKnown RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 PARP16Q8N5Y8 322 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 SLC5A8Q8N695 610 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 DCAF13Q9NV06 445 aaKnown RBP12.88□□□□□ -0.35
PEX1-201ENST00000248633 SEC14L3Q9UDX4 400 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 ADAM30Q9UKF2 790 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 SARDHQ9UL12 918 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 PRELID1Q9Y255 219 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 DLGAP4Q9Y2H0 992 aa12.88□□□□□ -0.35
PEX1-201ENST00000248633 A0A0G2JN53 185 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 AREL1O15033 823 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 ANXA8P13928 327 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 BLVRAP53004 296 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 SRSF11Q05519 484 aaKnown RBP12.87□□□□□ -0.35
PEX1-201ENST00000248633 BCL7AQ4VC05 210 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 CLEC12AQ5QGZ9 265 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 ANXA8L1Q5VT79 327 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 ATG9BQ674R7 924 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 MMAAQ8IVH4 418 aaKnown RBP12.87□□□□□ -0.35
PEX1-201ENST00000248633 METTL4Q8N3J2 472 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 PAPD5Q8NDF8 572 aaKnown RBP12.87□□□□□ -0.35
PEX1-201ENST00000248633 OR9Q2Q8NGE9 314 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 SLC32A1Q9H598 525 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 CCDC177Q9NQR7 707 aaPredicted RBP12.87□□□□□ -0.35
PEX1-201ENST00000248633 VPS29Q9UBQ0 182 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 DHRS7Q9Y394 339 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 TRPM7Q96QT4 1865 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 ISPDA4D126 451 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 GUCY1B2O75343 617 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 GRSF1Q12849 480 aaKnown RBP eCLIP12.87□□□□□ -0.35
PEX1-201ENST00000248633 SCARB2Q14108 478 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 MAD2L1BPQ15013 274 aaPredicted RBP12.87□□□□□ -0.35
PEX1-201ENST00000248633 WSCD2Q2TBF2 565 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 AGAP7PQ5VUJ5 663 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 PRSS48Q7RTY5 328 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 GRPEL2Q8TAA5 225 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 CSF3RQ99062 836 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 POLR2J3Q9H1A7 115 aaKnown RBP12.87□□□□□ -0.35
PEX1-201ENST00000248633 KCNH6Q9H252 994 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 POPDC3Q9HBV1 291 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 H0YC42 278 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 LEFTY2O00292 366 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 KDELR3O43731 214 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 HTR2BP41595 481 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 ANGPT1Q15389 498 aa12.87□□□□□ -0.35
PEX1-201ENST00000248633 EXOC3L2Q2M3D2 409 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms