RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 CCBE1Q6UXH8 406 aaPredicted RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 FAM35AQ86V20 835 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 SIDT2Q8NBJ9 832 aaKnown RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 GIMAP5Q96F15 307 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 UHRF1Q96T88 793 aaPredicted RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 HINT2Q9BX68 163 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 CDT1Q9H211 546 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 ACAD8Q9UKU7 415 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 ABCA8O94911 1581 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 CDK12Q9NYV4 1490 aaPredicted RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 SLC15A5A6NIM6 579 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 J3QLW9 94 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 DLGAP1O14490 977 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 EEF1E1O43324 174 aaKnown RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 SPDEFO95238 335 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 ZNF19P17023 458 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 GATMP50440 423 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 CHIT1Q13231 466 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 ZACNQ401N2 412 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 ZNF311Q5JNZ3 666 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 C1orf186Q6ZWK4 172 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 OR4L1Q8NH43 312 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 MFSD14AQ96MC6 490 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 MTG2Q9H4K7 406 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 MKKSQ9NPJ1 570 aaPredicted RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 ERVK13-1Q9NX77 482 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 IGSF9Q9P2J2 1179 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 SCP2D1Q9UJQ7 156 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 RNF6Q9Y252 685 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 PDE4DIPQ5VU43 2346 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 CDC7O00311 574 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 BHLHE40O14503 412 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 YY2O15391 372 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 CAPN3P20807 821 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 EIF2B1Q14232 305 aaKnown RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 GALEQ14376 348 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 GTPBP8Q8N3Z3 284 aaPredicted RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 ZNF781Q8N8C0 355 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 PPA2Q9H2U2 334 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 ANKHQ9HCJ1 492 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 LOC100130705A0A1B0GUX0 176 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 LRRC10BA6NIK2 292 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 NPIPA5E9PKD4 350 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 ARPC2O15144 300 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 SLC26A5P58743 744 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 MC2RQ01718 297 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 CAPN13Q6MZZ7 669 aaPredicted RBP10.77□□□□□ -0.68
MSH6-201ENST00000234420 C3orf33Q6P1S2 294 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 BEST3Q8N1M1 668 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 OR6Q1Q8NGQ2 317 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 TIFAQ96CG3 184 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 RNF157Q96PX1 679 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 TM9SF2Q99805 663 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 SLC6A7Q99884 636 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 OR10A4Q9H209 315 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 C17orf75Q9HAS0 396 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 NPIPA1Q9UND3 350 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 ZNF609O15014 1411 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 COL5A2P05997 1499 aaPredicted RBP10.77□□□□□ -0.68
MSH6-201ENST00000234420 LOC102724200A0A096LPH7 203 aaPredicted RBP10.77□□□□□ -0.68
MSH6-201ENST00000234420 A0A0A6YYH2 397 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 TCAF2A6NFQ2 919 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 A6NJ64 397 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 SHOXO15266 292 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 BRINP1O60477 761 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 RFPL2O75678 378 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 CPOXP36551 454 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 DAG1Q14118 895 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 GRIK5Q16478 980 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 ARL13AQ5H913 290 aaPredicted RBP10.77□□□□□ -0.68
MSH6-201ENST00000234420 C3orf38Q5JPI3 329 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 NDUFAF5Q5TEU4 345 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 LAS2Q8IYD9 372 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 KIAA0895Q8NCT3 520 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 NINJ1Q92982 152 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 DNAJB9Q9UBS3 223 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 WNT6Q9Y6F9 365 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 GLI2P10070 1586 aa10.77□□□□□ -0.68
MSH6-201ENST00000234420 C11orf98E9PRG8 122 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 F10P00742 488 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 NCBP2P52298 156 aaKnown RBP eCLIP10.77□□□□□ -0.691e-9■□□□□ 10.8
MSH6-201ENST00000234420 ZNF136P52737 540 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 GAD2Q05329 585 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 C12orf76Q8N812 135 aaPredicted RBP10.77□□□□□ -0.69
MSH6-201ENST00000234420 OR4Q3Q8NH05 313 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 PLEKHO2Q8TD55 490 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 FCAMRQ8WWV6 532 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 UBXN10Q96LJ8 280 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 TUBA1CQ9BQE3 449 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 SLC39A8Q9C0K1 460 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 REEP4Q9H6H4 257 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 KBTBD4Q9NVX7 518 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 CASC3O15234 703 aaKnown RBP10.77□□□□□ -0.69
MSH6-201ENST00000234420 MTX2O75431 263 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 DLSTP36957 453 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 HERVK_113P63132 956 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 ZDHHC17Q8IUH5 632 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 CCDC116Q8IYX3 515 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 ZNF34Q8IZ26 560 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 PNLDC1Q8NA58 520 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms