RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 TMEM79Q9BSE2 394 aa13.42□□□□□ -0.26
GPN3-201ENST00000228827 PHACTR1Q9C0D0 580 aa13.42□□□□□ -0.26
GPN3-201ENST00000228827 KLHL31Q9H511 634 aa13.42□□□□□ -0.26
GPN3-201ENST00000228827 CD274Q9NZQ7 290 aa13.42□□□□□ -0.26
GPN3-201ENST00000228827 DYTNA2CJ06 578 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 A8MUI8 341 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 C4orf51C9J302 202 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 TAPBPO15533 448 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 B4GALT2O60909 372 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 SEMA7AO75326 666 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 H2AFYO75367 372 aaKnown RBP13.41□□□□□ -0.26
GPN3-201ENST00000228827 C1GALT1C1LP0DN25 315 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 ICAM2P13598 275 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 GNAZP19086 355 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 ATP6V0D1P61421 351 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 RHAGQ02094 409 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 SLBPQ14493 270 aaKnown RBP eCLIP13.41□□□□□ -0.26
GPN3-201ENST00000228827 ABRAXAS2Q15018 415 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 TLR1Q15399 786 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 SLCO4C1Q6ZQN7 724 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 RIPOR1Q6ZS17 1223 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 RAPH1Q70E73 1250 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.41□□□□□ -0.26
GPN3-201ENST00000228827 SNX31Q8N9S9 440 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 TRPV3Q8NET8 790 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 CCT6BQ92526 530 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 IMMP1LQ96LU5 166 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 OR1F2PQ96R84 312 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 SLC6A16Q9GZN6 736 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 RHBGQ9H310 441 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 LANCL2Q9NS86 450 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 RNF112Q9ULX5 631 aa13.41□□□□□ -0.26
GPN3-201ENST00000228827 FLNCQ14315 2725 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 A0A0G2JN53 185 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 CBX6O95503 412 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 FHP07954 510 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 CYC1P08574 325 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 TSFMP43897 325 aaKnown RBP13.4□□□□□ -0.26
GPN3-201ENST00000228827 HSPA7P48741 367 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 SKP1P63208 163 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 GUCY2DQ02846 1103 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 ZNF33BQ06732 778 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 ACTN3Q08043 901 aaPredicted RBP13.4□□□□□ -0.26
GPN3-201ENST00000228827 HYAL2Q12891 473 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 NSDHLQ15738 373 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 ZKSCAN8Q15776 578 aaPredicted RBP13.4□□□□□ -0.26
GPN3-201ENST00000228827 SFT2D3Q587I9 215 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 FCRLBQ6BAA4 426 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 KLHDC8AQ8IYD2 350 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 TCAIMQ8N3R3 496 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 GRHL3Q8TE85 626 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 CREB3L4Q8TEY5 395 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 TBC1D20Q96BZ9 403 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 AICDAQ9GZX7 198 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.4□□□□□ -0.26
GPN3-201ENST00000228827 ALG9Q9H6U8 611 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 AGPAT4Q9NRZ5 378 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 DNAJC11Q9NVH1 559 aa13.4□□□□□ -0.26
GPN3-201ENST00000228827 NUP210LQ5VU65 1888 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 ANKUB1A6NFN9 424 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 URADA6NGE7 173 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 CLGNO14967 610 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 CCNT2O60583 730 aaKnown RBP13.39□□□□□ -0.27
GPN3-201ENST00000228827 WDPCPO95876 746 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 S100BP04271 92 aaPredicted RBP13.39□□□□□ -0.27
GPN3-201ENST00000228827 SERPINA6P08185 405 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 IL10P22301 178 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 KCNC1P48547 511 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 AGTR2P50052 363 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 ST13P50502 369 aaKnown RBP13.39□□□□□ -0.27
GPN3-201ENST00000228827 AP2B1P63010 937 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 DLG1Q12959 904 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 BMPR2Q13873 1038 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 ELOAQ14241 798 aaKnown RBP13.39□□□□□ -0.27
GPN3-201ENST00000228827 WHAMMP3Q1A5X7 153 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 ABHD17BQ5VST6 288 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 PLAG1Q6DJT9 500 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 SULT1C3Q6IMI6 304 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 PAPD4Q6PIY7 484 aaKnown RBP13.39□□□□□ -0.27
GPN3-201ENST00000228827 TMIGD1Q6UXZ0 262 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 KRT78Q8N1N4 520 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 PLPP5Q8NEB5 264 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 UBXN10Q96LJ8 280 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 CNOT10Q9H9A5 744 aaKnown RBP13.39□□□□□ -0.27
GPN3-201ENST00000228827 ZDHHC18Q9NUE0 388 aa13.39□□□□□ -0.27
GPN3-201ENST00000228827 PCM1Q15154 2024 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 FAM227AF5H4B4 570 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 STK16O75716 305 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 SLC35E2BP0CK96 405 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 TFEBP19484 476 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 JAK1P23458 1154 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 TNFSF10P50591 281 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 OR4D2P58180 307 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 BTN3A2P78410 334 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 BTG2P78543 158 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 NAB1Q13506 487 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 UAP1Q16222 522 aaPredicted RBP13.38□□□□□ -0.27
GPN3-201ENST00000228827 XKR6Q5GH73 641 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 UBAP2Q5T6F2 1119 aaKnown RBP13.38□□□□□ -0.27
GPN3-201ENST00000228827 NIPAL1Q6NVV3 410 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms