RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FAUP35544 74 aaKnown RBP17.82■□□□□ 0.44
CLIP2-201ENST00000223398 KCNC3Q14003 757 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 NRROSQ86YC3 692 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 CSNK1A1LQ8N752 337 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 EI24O14681 340 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 AZGP1P25311 298 aaKnown RBP17.82■□□□□ 0.44
CLIP2-201ENST00000223398 PCLAFQ15004 111 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 ODF4Q2M2E3 257 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 DEFB110Q30KQ9 67 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 ANKLE1Q8NAG6 615 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 ADAD1Q96M93 576 aaKnown RBP17.82■□□□□ 0.44
CLIP2-201ENST00000223398 ING3Q9NXR8 418 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 TAS2R1Q9NYW7 299 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 MAFFQ9ULX9 164 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 PDE10AQ9Y233 779 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 AHSA1O95433 338 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 NOXRED1Q6NXP6 359 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 C15orf39Q6ZRI6 1047 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 F2RL3Q96RI0 385 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 AHDC1Q5TGY3 1603 aaPredicted RBP17.82■□□□□ 0.44
CLIP2-201ENST00000223398 BPIP17213 487 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 EEFSECP57772 596 aaKnown RBP17.82■□□□□ 0.44
CLIP2-201ENST00000223398 SLAMF1Q13291 335 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 ELOAQ14241 798 aaKnown RBP17.82■□□□□ 0.44
CLIP2-201ENST00000223398 MOCOSQ96EN8 888 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 COPS4Q9BT78 406 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 ASPNQ9BXN1 380 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 B3GAT2Q9NPZ5 323 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 MAN2B2Q9Y2E5 1009 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 MYH13Q9UKX3 1938 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 WASHC1A8K0Z3 465 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 WASH3PC4AMC7 463 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 SOX1O00570 391 aaPredicted RBP17.81■□□□□ 0.44
CLIP2-201ENST00000223398 LATS1O95835 1130 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 WASH2PQ6VEQ5 465 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 MAU2Q9Y6X3 613 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 ADAMTSL3P82987 1691 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 PDYNP01213 254 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 OTX2P32243 289 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 SDC2P34741 201 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 GABRA3P34903 492 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 OR4D2P58180 307 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 TSPAN5P62079 268 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 MARCH8Q5T0T0 291 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 ZDHHC14Q8IZN3 488 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 RLN3Q8WXF3 142 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 TOP1MTQ969P6 601 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 MVB12BQ9H7P6 319 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 TAS2R9Q9NYW1 312 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 PCDHGA2Q9Y5H1 932 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 IL3P08700 152 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 IQCCQ4KMZ1 466 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 FLYWCH1Q4VC44 716 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 RABL3Q5HYI8 236 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 SCD5Q86SK9 330 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 LRRC17Q8N6Y2 441 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 PRSS51A0A1B0GVH4 220 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 A0A1B0GVT2 93 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 ANXA8P13928 327 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 ARSDP51689 593 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 CBX3Q13185 183 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 PHTF2Q8N3S3 785 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 MEIOBQ8N635 442 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 RHBDD1Q8TEB9 315 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 CANT1Q8WVQ1 401 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 WDR60Q8WVS4 1066 aa17.81■□□□□ 0.44
CLIP2-201ENST00000223398 PLD2O14939 933 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 SPINT3P49223 89 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 AQP4P55087 323 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 SMCO1Q147U7 214 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 FRMD7Q6ZUT3 714 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 OR4N5Q8IXE1 308 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 BOCQ9BWV1 1114 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 IFT46Q9NQC8 304 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 PDLIM7Q9NR12 457 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 FAM120CQ9NX05 1096 aaKnown RBP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 RAB26Q9ULW5 256 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 SPIN1Q9Y657 262 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 HCRTR2O43614 444 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 AKAP8O43823 692 aaKnown RBP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 AIREO43918 545 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 CDC40O60508 579 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 FBXO43Q4G163 708 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 WDR77Q9BQA1 342 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 RARRES3Q9UL19 164 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 RGPD5Q99666 1765 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 A0A1W2PQ72 361 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 PDLIM1O00151 329 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 RTCAO00442 366 aaKnown RBP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 SLC22A2O15244 555 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 SOX14O95416 240 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 CD1DP15813 335 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 BMP8BP34820 402 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 POU6F2P78424 691 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 ZNF234Q14588 700 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 FBXO42Q6P3S6 717 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 ZNF572Q7Z3I7 529 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 BMP8AQ7Z5Y6 402 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 THEM6Q8WUY1 208 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 UFD1Q92890 307 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms