RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 METTL27Q8N6F8 245 aaPredicted RBP18.5■□□□□ 0.55
SNAPC2-201ENST00000221573 MS4A6EQ96DS6 147 aa18.5■□□□□ 0.55
SNAPC2-201ENST00000221573 CLIP3Q96DZ5 547 aa18.5■□□□□ 0.55
SNAPC2-201ENST00000221573 ILKAPQ9H0C8 392 aaPredicted RBP18.5■□□□□ 0.55
SNAPC2-201ENST00000221573 HAO1Q9UJM8 370 aa18.5■□□□□ 0.55
SNAPC2-201ENST00000221573 SRPK3Q9UPE1 567 aa18.5■□□□□ 0.55
SNAPC2-201ENST00000221573 DNAJC15Q9Y5T4 150 aa18.5■□□□□ 0.55
SNAPC2-201ENST00000221573 PTGDR2Q9Y5Y4 395 aa18.5■□□□□ 0.55
SNAPC2-201ENST00000221573 A0A0G2JN53 185 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 FOXE1O00358 373 aaPredicted RBP18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 SAP18O00422 153 aaKnown RBP18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 IL1RNP18510 177 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 ARSFP54793 590 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 RAB8AP61006 207 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 STXBP1P61764 594 aaKnown RBP18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 MUM1Q2TAK8 710 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 FAM214AQ32MH5 1076 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 UGT3A2Q3SY77 523 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 C1orf189Q5VU69 101 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 GARNL3Q5VVW2 1013 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 RHBDD2Q6NTF9 364 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 UTP15Q8TED0 518 aaKnown RBP18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 TWIST2Q8WVJ9 160 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 CMTM7Q96FZ5 175 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 B3GNT4Q9C0J1 378 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 REXO4Q9GZR2 422 aaKnown RBP18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 TUBB1Q9H4B7 451 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 SLCO1B3Q9NPD5 702 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 PNPOQ9NVS9 261 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 NDOR1Q9UHB4 597 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 PCDHGA7Q9Y5G6 932 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 DSCR3O14972 297 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 ERI3O43414 337 aaKnown RBP18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 FOXS1O43638 330 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 SNUPNO95149 360 aaKnown RBP18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 DLGAP3O95886 979 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 ALAS2P22557 587 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 EMP3P54852 163 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 NDUFA9Q16795 377 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 C10orf62Q5T681 223 aaPredicted RBP18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 KHDRBS2Q5VWX1 349 aaKnown RBP18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 GALNT6Q8NCL4 622 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 GAL3ST3Q96A11 431 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 ACPTQ9BZG2 426 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 SPRY4Q9C004 299 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 TXLNGQ9NUQ3 528 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 FAM53CQ9NYF3 392 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 PPT2Q9UMR5 302 aa18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 TMEM184BQ9Y519 407 aaPredicted RBP18.49■□□□□ 0.55
SNAPC2-201ENST00000221573 A0A0A6YYC8 382 aaPredicted RBP18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 A0A1B0GX78 115 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 URADA6NGE7 173 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 I3L1I5 382 aaPredicted RBP18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 SKAP2O75563 359 aaPredicted RBP18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 HBQ1P09105 142 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 SMIM10L1P0DMW3 83 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 ITGAXP20702 1163 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 RORAP35398 523 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 RPL14P50914 215 aaKnown RBP18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 PLA2G16P53816 162 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 SHC2P98077 582 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 HMGCS1Q01581 520 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 DEPDC1Q5TB30 811 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 YOD1Q5VVQ6 348 aaPredicted RBP18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 ZNF385CQ66K41 422 aaPredicted RBP18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 FAM47EQ6ZV65 393 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 ABHD13Q7L211 337 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 TIPARPQ7Z3E1 657 aaKnown RBP18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 ZFAND4Q86XD8 727 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 PDSS2Q86YH6 399 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 AFAP1L2Q8N4X5 818 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 OR2L5Q8NG80 312 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 OR9A4Q8NGU2 314 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 SMIM10Q96HG1 83 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 GBP5Q96PP8 586 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 C17orf62Q9BQA9 187 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 AKIRIN1Q9H9L7 192 aaPredicted RBP18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 BRF2Q9HAW0 419 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 THSD1Q9NS62 852 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 MARCOQ9UEW3 520 aaPredicted RBP18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 ANGPTL2Q9UKU9 493 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 SLC12A4Q9UP95 1085 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 SLC22A7Q9Y694 548 aa18.48■□□□□ 0.55
SNAPC2-201ENST00000221573 ASPMQ8IZT6 3477 aa18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 CCDC88CQ9P219 2028 aa18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 NCOR2Q9Y618 2525 aa18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 RTCAO00442 366 aaKnown RBP18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 PIP5K1BO14986 540 aa18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 CHEK2O96017 543 aa18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 JUNP05412 331 aaKnown RBP18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 KITP10721 976 aa18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 ALOX12P18054 663 aa18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 PTX3P26022 381 aaPredicted RBP18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 MDH1P40925 334 aaKnown RBP18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 GYS2P54840 703 aa18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 CSTF3Q12996 717 aaKnown RBP18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 FAM53BQ14153 422 aa18.47■□□□□ 0.55
SNAPC2-201ENST00000221573 DEFB134Q4QY38 66 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms