RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 COL5A3P25940 1745 aaPredicted RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 TRBC2A0A5B9 178 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ZNF208O43345 1280 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 PRH1P02810 166 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 MSL3P1P0C860 447 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 DRD2P14416 443 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 AKT2P31751 481 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 OR1D2P34982 312 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 HOXD13P35453 343 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 GHRHRQ02643 423 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 C6orf141Q5SZD1 244 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 PRAMEF18Q5VWM3 479 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ARHGAP11AQ6P4F7 1023 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 GDPD4Q6W3E5 623 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 LRRTM4Q86VH4 590 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 MS4A15Q8N5U1 240 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SPATA22Q8NHS9 363 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 STOML3Q8TAV4 291 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 PHOX2BQ99453 314 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 XPNPEP1Q9NQW7 623 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 KCNIP3Q9Y2W7 256 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 C9IYK1 514 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SEPT4O43236 478 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SPATA31D3P0C874 917 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 GGT1P19440 569 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 CDK2P24941 298 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 AQP1P29972 269 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 HOXC12P31275 282 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 MSX2P35548 267 aaPredicted RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 GJA9P57773 515 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 TBC1D25Q3MII6 688 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SFT2D3Q587I9 215 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ATAT1Q5SQI0 421 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SCIMPQ6UWF3 145 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SPATA31D4Q6ZUB0 917 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SERPINA11Q86U17 422 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 TSPAN33Q86UF1 283 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 GPAT4Q86UL3 456 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 UMODL1-AS1Q8N2C9 162 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 TXNDC5Q8NBS9 432 aaKnown RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 OR13J1Q8NGT2 312 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 RPLP0P6Q8NHW5 317 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 VANGL1Q8TAA9 524 aaPredicted RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 LMO3Q8TAP4 145 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 LRCH3Q96II8 777 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 CCDC115Q96NT0 180 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 KCNC2Q96PR1 638 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SIAEQ9HAT2 523 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 TPT1P8Q9HAU6 139 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 FAM118AQ9NWS6 357 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 TAS2R10Q9NYW0 307 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ATPIF1Q9UII2 106 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 FKBPLQ9UIM3 349 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SLC22A31A6NKX4 558 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 YJEFN3A6XGL0 299 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 UPK3BL1B0FP48 263 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 UPK3BL2E5RIL1 263 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 TOR1BO14657 336 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 FLRT2O43155 660 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 TGM6O95932 706 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 PDYNP01213 254 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 AHSGP02765 367 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ALDOAP04075 364 aaKnown RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 OR3A3P47888 321 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 OR3A2P47893 321 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 KCNC1P48547 511 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 BEX3Q00994 111 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ILF3Q12906 894 aaKnown RBP eCLIP4.27□□□□□ -1.733e-6■■■■□ 20.7
CHD9-201ENST00000219084 PPIGQ13427 754 aaKnown RBP eCLIP4.27□□□□□ -1.73
CHD9-201ENST00000219084 TREML2Q5T2D2 321 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 RTL6Q6ICC9 239 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 PDE12Q6L8Q7 609 aaKnown RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 PAQR3Q6TCH7 311 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 CEACAM20Q6UY09 585 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SAPCD2Q86UD0 394 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 THOC6Q86W42 341 aaKnown RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 ARHGAP12Q8IWW6 846 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ARMC10Q8N2F6 343 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 PGAP3Q96FM1 320 aaPredicted RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 IL4I1Q96RQ9 567 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SRMSQ9H3Y6 488 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 FN3KQ9H479 309 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 IMP3Q9NV31 184 aaKnown RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 DUS2Q9NX74 493 aaKnown RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 A6NHS1 94 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 CPNE3O75131 537 aaKnown RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 JRKO75564 520 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 HTR1AP08908 422 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 MYCLP1P12525 358 aaPredicted RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 PTPN2P17706 415 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 NPR2P20594 1047 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 FSHRP23945 695 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ACRV1P26436 265 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 GABRR2P28476 465 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 YAP1P46937 504 aaKnown RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 AKR1D1P51857 326 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 MLLT6P55198 1093 aaPredicted RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 NOGQ13253 232 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 TGFBIQ15582 683 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 TSTQ16762 297 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms