RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 NFKBIDQ8NI38 313 aa14.19□□□□□ -0.14
SPTLC2-201ENST00000216484 TMEM134Q9H6X4 195 aa14.19□□□□□ -0.14
SPTLC2-201ENST00000216484 RLIMQ9NVW2 624 aa14.19□□□□□ -0.14
SPTLC2-201ENST00000216484 UNC13BO14795 1591 aa14.19□□□□□ -0.14
SPTLC2-201ENST00000216484 A0A1W2PQ45 241 aaPredicted RBP14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 A0A1W2PQY0 241 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 K7EPK0 472 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 CLIC1O00299 241 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 RBBP9O75884 186 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 SLITRK5O94991 958 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 DIRAS3O95661 229 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 TAS2R40P59535 323 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 LRIF1Q5T3J3 769 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 SLC2A7Q6PXP3 512 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 KDELC1Q6UW63 502 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 FAM71E2Q8N5Q1 922 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 LRRC58Q96CX6 371 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 SGCZQ96LD1 299 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 C17orf62Q9BQA9 187 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 THUMPD1Q9NXG2 353 aaKnown RBP14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 HECW2Q9P2P5 1572 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 IL20RAQ9UHF4 553 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 MANSC4A6NHS7 340 aaPredicted RBP14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 COQ9O75208 318 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 GSTM3P21266 225 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 S1PR1P21453 382 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 SP3Q02447 781 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 HABP2Q14520 560 aaPredicted RBP14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 PIGBOS1A0A0B4J2F0 54 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 B4DGG1 531 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 C11orf98E9PRG8 122 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 INSIG1O15503 277 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 SCGB1D1O95968 90 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 STATHP02808 62 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 DPP6P42658 865 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 FOXK1P85037 733 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 SERINC3Q13530 473 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 C9orf131Q5VYM1 1079 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 FOXR2Q6PJQ5 311 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 ASF1BQ9NVP2 202 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 DNAJC27Q9NZQ0 273 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 PPP4R1LQ9P1A2 415 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 NFATC1O95644 943 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 IL3P08700 152 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 ANXA8P13928 327 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 ETV5P41161 510 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 CRHR2Q13324 411 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 C9orf57Q5W0N0 161 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 SKA3Q8IX90 412 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 ASB6Q9NWX5 421 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 CREBL2O60519 120 aaPredicted RBP14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 DPEP1P16444 411 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 AKR1C2P52895 323 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 AIF1P55008 147 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 ELP2Q6IA86 826 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 GSG1LQ6UXU4 331 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 SMIM15Q7Z3B0 74 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 C22orf15Q8WYQ4 148 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 PRDM15P57071 1507 aaPredicted RBP14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 NCANO14594 1321 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 CHD5Q8TDI0 1954 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 FLRT2O43155 660 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 PI15O43692 258 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 MATN1P21941 496 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 TAS2R43P59537 309 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 GALK2Q01415 458 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 GAD2Q05329 585 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 Q8N402 240 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 PRR18Q8N4B5 295 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 RPLP0P6Q8NHW5 317 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 HMCESQ96FZ2 354 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 TTPALQ9BTX7 342 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 B3GNT5Q9BYG0 378 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 OR2B2Q9GZK3 357 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 DSC2Q02487 901 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 TAF10Q12962 218 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 DECR1Q16698 335 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 SPIN4Q56A73 249 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 CELF3Q5SZQ8 465 aaKnown RBP14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 FTMTQ8N4E7 242 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 RRNAD1Q96FB5 475 aaKnown RBP14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 SCRN2Q96FV2 425 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 ZDHHC4Q9NPG8 344 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 DHDHQ9UQ10 334 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 POMPQ9Y244 141 aa14.18□□□□□ -0.14
SPTLC2-201ENST00000216484 AP2A1O95782 977 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 H2AFB2P0C5Z0 115 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 GSTM4Q03013 218 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 ZBED5Q49AG3 693 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 EGFL6Q8IUX8 553 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 SPOCK2Q92563 424 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 SYNGR4O95473 234 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 RPS17P08708 135 aaKnown RBP14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 ARHGAP40Q5TG30 622 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 PXKQ7Z7A4 578 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 MAP4K3Q8IVH8 894 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 ZCCHC3Q9NUD5 404 aaKnown RBP14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 EPHA6Q9UF33 1036 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 PXDNLA1KZ92 1463 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 BMP6P22004 513 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms