RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 ZNF451Q9Y4E5 1061 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 ERAL1O75616 437 aaKnown RBP11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 CCNDBP1O95273 360 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 PDGFAP04085 211 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 MYF6P23409 242 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 MAGEA12P43365 314 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 MAP2K3P46734 347 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 CEBPGP53567 150 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 MANFP55145 182 aaKnown RBP11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 DSTNP60981 165 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 NPAS4Q8IUM7 802 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 TMIEQ8NEW7 156 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 ZMIZ2Q8NF64 920 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 TSPEARQ8WU66 669 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 KHSRPQ92945 711 aaKnown RBP eCLIP11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 NLKQ9UBE8 527 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 TBC1D3BA6NDS4 549 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 ZNF623O75123 536 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 TRIM3O75382 744 aaPredicted RBP11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 OR5F1O95221 314 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 CXCR2P25025 360 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 CPOXP36551 454 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 CSKP41240 450 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 TXNL4AP83876 142 aaKnown RBP11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 EMX2Q04743 252 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 SRSF11Q05519 484 aaKnown RBP11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 C2orf80Q0P641 193 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 GPR17Q13304 367 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 GPR33Q49SQ1 333 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 CXorf57Q6NSI4 855 aaKnown RBP11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 LRRTM3Q86VH5 581 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 PTERQ96BW5 349 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 GON7Q9BXV9 100 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 CXCL16Q9H2A7 254 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 NANSQ9NR45 359 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 ANXA3P12429 323 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 ZNF14P17017 642 aaPredicted RBP11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 PTGR1Q14914 329 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 CHRNA6Q15825 494 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 LRRN1Q6UXK5 716 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 GOLGA7Q7Z5G4 137 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 C2orf73Q8N5S3 287 aaPredicted RBP11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 NDNFQ8TB73 568 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 SUSD6Q92537 303 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 COL26A1Q96A83 441 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 NECTIN3Q9NQS3 549 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 MAP4K5Q9Y4K4 846 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 CLIC1O00299 241 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 GMDSO60547 372 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 CLDN7O95471 211 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 NOS3P29474 1203 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 MAGEA3P43357 314 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 ETV1P50549 477 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 AFF1P51825 1210 aaKnown RBP11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 TGM3Q08188 693 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 UBXN11Q5T124 520 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 RAB12Q6IQ22 244 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 PGM2L1Q6PCE3 622 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 ZCCHC12Q6PEW1 402 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 SPARTQ8N0X7 666 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 MINDY1Q8N5J2 469 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 GTPBP3Q969Y2 492 aaKnown RBP11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 SNX18Q96RF0 628 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 FAM129BQ96TA1 746 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 MCOLN1Q9GZU1 580 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 INIPQ9NRY2 104 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 ENTPD4Q9Y227 616 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 SPACA6W5XKT8 324 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 WDR81Q562E7 1941 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 PITPNM1O00562 1244 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 POP4O95707 220 aaKnown RBP11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 JUNP05412 331 aaKnown RBP11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 IFNGR2P38484 337 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 ATAD3CQ5T2N8 411 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 ZDHHC20Q5W0Z9 365 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 PDE12Q6L8Q7 609 aaKnown RBP11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 RD3Q7Z3Z2 195 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 OR5J2Q8NH18 312 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 PEX13Q92968 403 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 SLC38A4Q969I6 547 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 NEURL2Q9BR09 285 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 NLE1Q9NVX2 485 aaPredicted RBP11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 IRAK3Q9Y616 596 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 HMX2A2RU54 273 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 GSAPA4D1B5 854 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 MTMR11A4FU01 709 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 DLGAP1O14490 977 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 GRM6O15303 877 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 ATG13O75143 517 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 ADH1AP07327 375 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 SMIM18P0DKX4 95 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 CDH12P55289 794 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 GRM2Q14416 872 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 FAM26DQ5JW98 314 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 SERPINA13PQ6UXR4 307 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 C2orf15Q8WU43 125 aaKnown RBP11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 DNAJA4Q8WW22 397 aaPredicted RBP11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 AP2M1Q96CW1 435 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 TOX2Q96NM4 488 aa11.73□□□□□ -0.53
TSPAN9-201ENST00000011898 PFDN5Q99471 154 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms