RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 D5Ertd577eQ499F0 481 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Znf354aQ61751 572 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ptx4Q6RUU0 478 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Paqr6Q6TCG5 343 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Kctd13Q8BGV7 329 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Lrch3Q8BVU0 778 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 4933436I01RikQ9D3T1 429 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tbc1d20Q9D9I4 402 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ssna1Q9JJ94 119 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Znf354bQ9QXT9 601 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Bag6Q9Z1R2 1154 aaKnown RBP9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc22a2O70577 553 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ptger3P30557 365 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gadd45aP48316 165 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gas1Q01721 343 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Taar7fQ5QD08 358 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Taar7eQ5QD09 358 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Taar7bQ5QD11 358 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc25a12Q8BH59 677 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Steap3Q8CI59 488 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Spp2Q8K1I3 203 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 RergQ8R367 199 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr807Q8VGI9 311 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Uba7Q9DBK7 977 aa9.86□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cyp4a14O35728 507 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cdk18Q04899 451 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Lrrc74bQ14BP6 391 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tnks2Q3UES3 1166 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Psg28Q4KL66 472 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vmn2r81Q80Z09 865 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Hpf1Q8CFE2 346 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr952Q8VFD7 314 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Znf622Q91VY9 476 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Mrpl15Q9CPR5 295 aaKnown RBP9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ppil3Q9D6L8 161 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 ApmapQ9D7N9 415 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ccdc107Q9DCC3 242 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ndrg3Q9QYF9 375 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm7792A0A0J9YU01 481 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Fam131cA2ADB2 273 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm3183D3YUJ6 481 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm3139J3QK78 481 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm3106J3QPH3 481 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Prkag1O54950 330 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Lamp1P11438 406 aaKnown RBP9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 CenpcP49452 906 aaKnown RBP9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ap2s1P62743 142 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tas2r13Q7M720 305 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Arl5aQ80ZU0 179 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Grk5Q8VEB1 590 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ralgps1A2AR50 585 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm8369E9PZI3 166 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 PpibP24369 216 aaKnown RBP9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Pld2P97813 933 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ptpn2Q06180 406 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 C2cd4cC2CD4Q5HZI2 419 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Oxa1lQ8BGA9 433 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ahsa1Q8BK64 338 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Q8BR90 294 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Sdcbp2Q99JZ0 292 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Hspa14Q99M31 509 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Txnrd3Q99MD6 652 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tysnd1Q9DBA6 568 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Clec2iQ9WVF9 217 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vmn2r84D3YWE3 849 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Capn1O35350 713 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Mmp10O55123 476 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Hmgn1P18608 96 aaKnown RBP9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ranbp9P69566 653 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rbm15Q0VBL3 962 aaKnown RBP9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm11992Q5SS90 291 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Flrt2Q8BLU0 660 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rbm12Q8R4X3 992 aaKnown RBP9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ppa2Q91VM9 330 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 B4galt3Q91YY2 395 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tmed9Q99KF1 235 aaKnown RBP9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Unc50Q9CQ61 259 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Pias4Q9JM05 507 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Abhd1Q9QZC8 412 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm7073E9QAS1 335 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Adam5Q3TTE0 751 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 B3gnt6Q3USF0 391 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Them4Q3UUI3 230 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Pnliprp1Q5BKQ4 473 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ostf1Q62422 215 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc6a7Q6PGE7 637 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc41a2Q8BYR8 573 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ccdc58Q8R3Q6 144 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 EqtnQ9D9V2 337 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 TescQ9JKL5 214 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vmn2r90E9PXJ8 863 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vmn2r95L7N274 845 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vmn2r42O35192 852 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cdk5r2O35926 369 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 St3gal5O88829 414 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 MycP01108 439 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Lsmem1Q3UQS2 128 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Defb34Q7TNV8 81 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Psapl1Q8C1C1 522 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gipc3Q8R5M0 297 aa9.85□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms