RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Samd14Q8K070 417 aa11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Fmo2Q8K2I3 535 aa11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 CtbsQ8R242 366 aa11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Usp3Q91W36 520 aaKnown RBP11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Ugt2b38Q91WH2 530 aa11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Fam118aQ91YN1 357 aa11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Bcl7bQ921K9 202 aa11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 GgactQ923B0 149 aa11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 SvbpQ99LQ4 66 aa11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Trmt11Q9CWH5 460 aa11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Trhr2Q9ERT2 382 aa11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Cav2Q9WVC3 162 aa11.15□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Tmem131O70472 1877 aa11.15□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Pcdhgb8A0A140LI48 931 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Pbx3O35317 434 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 H2-Eb1P04230 264 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Htr5bP31387 370 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Hmx2P43687 273 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Dsc3P55850 896 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 YwhahP68510 246 aaKnown RBP11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Hrh2P97292 397 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Itga4Q00651 1039 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Pcgf5Q3UK78 256 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 PkdccQ5RJI4 492 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Mocs1Q5RKZ7 636 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Caprin1Q60865 707 aaKnown RBP11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Olfr1046Q7TR79 316 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Fndc11Q80WB0 326 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Q8BHR8 331 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Mblac1Q8BWY4 260 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Olfr437Q8VEV1 310 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Mat1aQ91X83 396 aaKnown RBP11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 PigxQ99LV7 254 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Det1Q9D0A0 550 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 MioxQ9QXN5 285 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Vnn3Q9QZ25 500 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 AadatQ9WVM8 425 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Rpl9-ps1S4R1R7 191 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gm5565A0A0G2JGB2 317 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Ccdc194A0A140LIT1 234 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Klhdc7bA0A286YD60 1263 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 A430033K04RikE9Q8G5 680 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Sept4P28661 478 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Rras2P62071 204 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Zdhhc20Q5Y5T1 380 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Arhgef4Q7TNR9 484 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Slc25a12Q8BH59 677 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Unc5aQ8K1S4 898 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Vmn1r192Q8K4C9 300 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 BfarQ8R079 450 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Rgs10Q9CQE5 181 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Ndufaf4Q9D1H6 173 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Olfr704Q9EPF6 315 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 TinagQ9WUR0 475 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 MlxO08609 298 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 TpmtO55060 240 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 PfklP12382 780 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 PgfP49764 158 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Ctps2P70303 586 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Krt2Q3TTY5 707 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 LcorlQ3U285 600 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Slc22a16Q497L8 649 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Vezf1Q5SXC4 518 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Lcp2Q60787 533 aaKnown RBP11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Tlr12Q6QNU9 906 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Tmem270Q6UJB9 264 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Kcmf1Q80UY2 381 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Rcc2Q8BK67 520 aaKnown RBP11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Klhl31Q8BWA5 634 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 SntnQ8C9X1 147 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 TrhdeQ8K093 1025 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Timd2Q8R183 305 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Atpaf2Q91YY4 289 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Dio3Q91ZI8 304 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Galnt11Q921L8 608 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Cryzl1Q921W4 348 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gstt3Q99L20 241 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Trem2Q99NH8 227 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 CacybpQ9CXW3 229 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Snrnp48Q9D361 337 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 TrilQ9DBY4 809 aa11.14□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Ankrd16A2AS55 361 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Smpd5D6MZJ6 483 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gm7951E9Q0A2 213 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gm6482F6YHC1 213 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gm17124F6ZIG1 213 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gtpbp1O08582 668 aaKnown RBP11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Adam19O35674 920 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Hes2O54792 157 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Vti1bO88384 232 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 UoxP25688 303 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Slc11a2P49282 568 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Tsc22d1P62500 1077 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Barhl1P63157 327 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Lingo4Q149C3 593 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gsdmc2Q2KHK6 480 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Gpr149Q3UVY1 732 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Ankrd28Q505D1 1053 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Dio1Q61153 257 aa11.13□□□□□ -0.63
Sdc1-201ENSMUST00000020911 Doxl2Q6IMK7 723 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms