RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Msi2Q920Q6 346 aaKnown RBP16.13■□□□□ 0.17
Trim54-201ENSMUST00000013771 Slc8b1Q925Q3 585 aa16.13■□□□□ 0.17
Trim54-201ENSMUST00000013771 LiasQ99M04 373 aa16.13■□□□□ 0.17
Trim54-201ENSMUST00000013771 Msh4Q99MT2 958 aa16.13■□□□□ 0.17
Trim54-201ENSMUST00000013771 Oma1Q9D8H7 521 aa16.13■□□□□ 0.17
Trim54-201ENSMUST00000013771 Dtwd1Q9D8U7 304 aa16.13■□□□□ 0.17
Trim54-201ENSMUST00000013771 Cmpk1Q9DBP5 196 aa16.13■□□□□ 0.17
Trim54-201ENSMUST00000013771 Tcea2Q9QVN7 299 aa16.13■□□□□ 0.17
Trim54-201ENSMUST00000013771 Rgs20Q9QZB1 239 aa16.13■□□□□ 0.17
Trim54-201ENSMUST00000013771 Ddx39bQ9Z1N5 428 aaKnown RBP16.13■□□□□ 0.17
Trim54-201ENSMUST00000013771 Ighv1-43A0A0A6YXN5 117 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Smok3aC0HKC8 504 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Smok3bC0HKC9 504 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Vmn2r5K7N788 911 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Gm7942L7N277 499 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 NumblO08919 604 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Ica1lQ3TY65 431 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Tvp23aQ6NVH0 222 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Zfp759Q7M6X3 721 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Slc16a9Q7TM99 508 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Slco6c1Q8C0X7 706 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Zfp446Q8C9M8 523 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 PygbQ8CI94 843 aaKnown RBP16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Dedd2Q8QZV0 330 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Trim31Q8R0K2 507 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Olfr584Q8VGW0 319 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Smap1Q91VZ6 440 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Slc44a3Q921V7 656 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Q9D4G1 230 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Prss23Q9D6X6 382 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Olfr705Q9EPF7 316 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Tnfrsf22Q9ER62 198 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Crlf3Q9Z2L7 442 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 Parp4E9PYK3 1969 aa16.12■□□□□ 0.17
Trim54-201ENSMUST00000013771 CfpP11680 464 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Gsta4P24472 222 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 PrkcdP28867 674 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Serpina3mQ03734 418 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 H2-M3Q31093 336 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Ccdc127Q3TC33 260 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Foxred1Q3TQB2 487 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Q3U4G0 281 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Dtx3lQ3UIR3 748 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 XpaQ64267 272 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Fbxl19Q6PB97 674 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 PrlhrQ6VMN6 370 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 ArsjQ8BM89 598 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 BC024139Q8BVJ3 772 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Peli3Q8BXR6 445 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Gramd1cQ8CI52 457 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Sidt2Q8CIF6 832 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Smyd2Q8R5A0 433 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Klrb1fQ8VD98 217 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Olfr441Q8VFS5 310 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Homer3Q99JP6 356 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Fgfr1op2Q9CRA9 253 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Gm26657Q9CVR1 127 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 FopnlQ9CZS3 174 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Npas3Q9QZQ0 925 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Wdr76A6PWY4 622 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 AgxtO35423 414 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 C1qbpO35658 278 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 E2f6O54917 272 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Ninj1O70131 152 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Olfm1O88998 485 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Tdpoz1P0DMR5 365 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Gm9125P0DMR6 365 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Phxr1P15973 60 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Vps26aP40336 327 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Gli1P47806 1111 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 S100bP50114 92 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Mmp11Q02853 492 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 HdxQ14B70 692 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 SbplQ3TUY3 232 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 RflnbQ5SVD0 216 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Rbbp7Q60973 425 aaKnown RBP16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 CishQ62225 257 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Atp2a3Q64518 1038 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Kir3dl2Q673W2 388 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Ckmt2Q6P8J7 419 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Zfp933Q6PEE4 468 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Lrit2Q6PFC5 549 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Eif2s1Q6ZWX6 315 aaKnown RBP16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Banf2Q8BVR0 90 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Efcab7Q8VDY4 628 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Olfr357Q8VFP4 308 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Olfr1008Q8VGC7 313 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Hdac11Q91WA3 347 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Eci2Q9WUR2 391 aa16.11■□□□□ 0.17
Trim54-201ENSMUST00000013771 Ascc3E9PZJ8 2198 aaKnown RBP16.1■□□□□ 0.17
Trim54-201ENSMUST00000013771 Tmem236A2ARJ3 344 aa16.1■□□□□ 0.17
Trim54-201ENSMUST00000013771 Pcdh17E9PXF0 1157 aa16.1■□□□□ 0.17
Trim54-201ENSMUST00000013771 Zfp788E9Q980 884 aa16.1■□□□□ 0.17
Trim54-201ENSMUST00000013771 Sgo2bJ3QMK1 1167 aa16.1■□□□□ 0.17
Trim54-201ENSMUST00000013771 SagP20443 403 aa16.1■□□□□ 0.17
Trim54-201ENSMUST00000013771 Rab21P35282 222 aa16.1■□□□□ 0.17
Trim54-201ENSMUST00000013771 AbatP61922 500 aa16.1■□□□□ 0.17
Trim54-201ENSMUST00000013771 Nkx3-2P97503 333 aa16.1■□□□□ 0.17
Trim54-201ENSMUST00000013771 Pitpnm3Q3UHE1 974 aa16.1■□□□□ 0.17
Trim54-201ENSMUST00000013771 Xrcc1Q60596 631 aa16.1■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms