RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SLC4A10Q6U841 1118 aa22.25■■□□□ 1.15
PHGDH-232ENST00000641947 USP16Q9Y5T5 823 aa22.25■■□□□ 1.15
PHGDH-232ENST00000641947 THSD7AQ9UPZ6 1657 aa22.25■■□□□ 1.15
PHGDH-232ENST00000641947 SNRPA1P09661 255 aaKnown RBP22.25■■□□□ 1.15
PHGDH-232ENST00000641947 DDB1Q16531 1140 aa22.25■■□□□ 1.15
PHGDH-232ENST00000641947 PIGBQ92521 554 aa22.25■■□□□ 1.15
PHGDH-232ENST00000641947 TMOD3Q9NYL9 352 aa22.25■■□□□ 1.15
PHGDH-232ENST00000641947 ADCY9O60503 1353 aa22.24■■□□□ 1.15
PHGDH-232ENST00000641947 BCL9O00512 1426 aa22.24■■□□□ 1.15
PHGDH-232ENST00000641947 MARCH10Q8NA82 808 aaPredicted RBP22.23■■□□□ 1.15
PHGDH-232ENST00000641947 FAM98CQ17RN3 349 aaKnown RBP22.22■■□□□ 1.15
PHGDH-232ENST00000641947 MEIS3Q99687 375 aa22.22■■□□□ 1.15
PHGDH-232ENST00000641947 CHMP4AQ9BY43 222 aa22.22■■□□□ 1.15
PHGDH-232ENST00000641947 USP21Q9UK80 565 aa22.22■■□□□ 1.15
PHGDH-232ENST00000641947 ATP10DQ9P241 1426 aa22.22■■□□□ 1.15
PHGDH-232ENST00000641947 HDAC1Q13547 482 aaPredicted RBP22.22■■□□□ 1.15
PHGDH-232ENST00000641947 DDX21Q9NR30 783 aaKnown RBP eCLIP22.22■■□□□ 1.15
PHGDH-232ENST00000641947 TSHZ2Q9NRE2 1034 aa22.22■■□□□ 1.15
PHGDH-232ENST00000641947 CCT4P50991 539 aaKnown RBP22.21■■□□□ 1.15
PHGDH-232ENST00000641947 LRP10Q7Z4F1 713 aa22.21■■□□□ 1.15
PHGDH-232ENST00000641947 ASAP1Q9ULH1 1129 aa22.21■■□□□ 1.15
PHGDH-232ENST00000641947 PIP4K2AP48426 406 aaPredicted RBP22.2■■□□□ 1.14
PHGDH-232ENST00000641947 RWDD1Q9H446 243 aaPredicted RBP22.2■■□□□ 1.14
PHGDH-232ENST00000641947 ARFGEF2Q9Y6D5 1785 aa22.2■■□□□ 1.14
PHGDH-232ENST00000641947 PTCD1O75127 700 aaKnown RBP22.2■■□□□ 1.14
PHGDH-232ENST00000641947 SIRT2Q8IXJ6 389 aa22.2■■□□□ 1.14
PHGDH-232ENST00000641947 ATG3Q9NT62 314 aa22.2■■□□□ 1.14
PHGDH-232ENST00000641947 TJP1Q07157 1748 aa22.19■■□□□ 1.14
PHGDH-232ENST00000641947 PI4KAP2A4QPH2 592 aa22.19■■□□□ 1.14
PHGDH-232ENST00000641947 PI4KAP1Q8N8J0 262 aa22.19■■□□□ 1.14
PHGDH-232ENST00000641947 CHMP4BQ9H444 224 aaKnown RBP22.19■■□□□ 1.14
PHGDH-232ENST00000641947 HYPKQ9NX55 129 aa22.19■■□□□ 1.14
PHGDH-232ENST00000641947 MEX3CQ5U5Q3 659 aaKnown RBP22.18■■□□□ 1.14
PHGDH-232ENST00000641947 AFF2P51816 1311 aa22.18■■□□□ 1.14
PHGDH-232ENST00000641947 MYL6BP14649 208 aa22.17■■□□□ 1.14
PHGDH-232ENST00000641947 NUP188Q5SRE5 1749 aa22.17■■□□□ 1.14
PHGDH-232ENST00000641947 PRIM1P49642 420 aaKnown RBP22.16■■□□□ 1.14
PHGDH-232ENST00000641947 DNAAF4Q8WXU2 420 aa22.16■■□□□ 1.14
PHGDH-232ENST00000641947 NBPF26B4DH59 902 aa22.15■■□□□ 1.14
PHGDH-232ENST00000641947 NBPF14Q5TI25 921 aa22.15■■□□□ 1.14
PHGDH-232ENST00000641947 NBPF10Q6P3W6 841 aaKnown RBP22.15■■□□□ 1.14
PHGDH-232ENST00000641947 NBPF15Q8N660 670 aa22.15■■□□□ 1.14
PHGDH-232ENST00000641947 ATRNO75882 1429 aa22.15■■□□□ 1.14
PHGDH-232ENST00000641947 AFDNP55196 1824 aaKnown RBP22.15■■□□□ 1.14
PHGDH-232ENST00000641947 BEND3Q5T5X7 828 aa22.15■■□□□ 1.14
PHGDH-232ENST00000641947 SYTL4Q96C24 671 aaPredicted RBP22.15■■□□□ 1.14
PHGDH-232ENST00000641947 AIMP1Q12904 312 aaKnown RBP22.14■■□□□ 1.13
PHGDH-232ENST00000641947 ACSBG1Q96GR2 724 aa22.14■■□□□ 1.13
PHGDH-232ENST00000641947 SLC4A9Q96Q91 983 aa22.14■■□□□ 1.13
PHGDH-232ENST00000641947 MAP3K2Q9Y2U5 619 aa22.14■■□□□ 1.13
PHGDH-232ENST00000641947 KSR2Q6VAB6 950 aa22.13■■□□□ 1.13
PHGDH-232ENST00000641947 SMC5Q8IY18 1101 aa22.13■■□□□ 1.13
PHGDH-232ENST00000641947 XAGE3Q8WTP9 111 aa22.13■■□□□ 1.13
PHGDH-232ENST00000641947 CEP85Q6P2H3 762 aa22.12■■□□□ 1.13
PHGDH-232ENST00000641947 USP44Q9H0E7 712 aa22.12■■□□□ 1.13
PHGDH-232ENST00000641947 PDZRN3Q9UPQ7 1066 aa22.12■■□□□ 1.13
PHGDH-232ENST00000641947 COPS6Q7L5N1 327 aa22.12■■□□□ 1.13
PHGDH-232ENST00000641947 SRCIN1Q9C0H9 1055 aa22.12■■□□□ 1.13
PHGDH-232ENST00000641947 A1BGP04217 495 aa22.11■■□□□ 1.13
PHGDH-232ENST00000641947 ERBB4Q15303 1308 aa22.1■■□□□ 1.13
PHGDH-232ENST00000641947 RGS3P49796 1198 aa22.1■■□□□ 1.13
PHGDH-232ENST00000641947 DNAJC10Q8IXB1 793 aa22.1■■□□□ 1.13
PHGDH-232ENST00000641947 ANKRD44Q8N8A2 993 aa22.1■■□□□ 1.13
PHGDH-232ENST00000641947 SBF2Q86WG5 1849 aa22.1■■□□□ 1.13
PHGDH-232ENST00000641947 GJD4Q96KN9 370 aaPredicted RBP22.1■■□□□ 1.13
PHGDH-232ENST00000641947 RBM42Q9BTD8 480 aaKnown RBP22.1■■□□□ 1.13
PHGDH-232ENST00000641947 CICQ96RK0 1608 aaPredicted RBP22.09■■□□□ 1.13
PHGDH-232ENST00000641947 VSIG10Q8N0Z9 540 aa22.09■■□□□ 1.13
PHGDH-232ENST00000641947 NHSQ6T4R5 1651 aa22.08■■□□□ 1.12
PHGDH-232ENST00000641947 BTAF1O14981 1849 aa22.08■■□□□ 1.12
PHGDH-232ENST00000641947 KCNQ2O43526 872 aa22.07■■□□□ 1.12
PHGDH-232ENST00000641947 DDX58O95786 925 aaKnown RBP22.07■■□□□ 1.12
PHGDH-232ENST00000641947 GNAI2P04899 355 aa22.07■■□□□ 1.12
PHGDH-232ENST00000641947 GNAI3P08754 354 aa22.07■■□□□ 1.12
PHGDH-232ENST00000641947 CWF19L2Q2TBE0 894 aaKnown RBP22.07■■□□□ 1.12
PHGDH-232ENST00000641947 BRWD3Q6RI45 1802 aa22.07■■□□□ 1.12
PHGDH-232ENST00000641947 EP400Q96L91 3159 aa22.06■■□□□ 1.12
PHGDH-232ENST00000641947 A0A0G2JS52 829 aa22.06■■□□□ 1.12
PHGDH-232ENST00000641947 IGKV5-2P06315 115 aa22.06■■□□□ 1.12
PHGDH-232ENST00000641947 NBPF7P0C2Y1 421 aaPredicted RBP22.06■■□□□ 1.12
PHGDH-232ENST00000641947 MYT1Q01538 1121 aa22.06■■□□□ 1.12
PHGDH-232ENST00000641947 RPAP2Q8IXW5 612 aaPredicted RBP22.06■■□□□ 1.12
PHGDH-232ENST00000641947 LRRFIP2Q9Y608 721 aaKnown RBP22.06■■□□□ 1.12
PHGDH-232ENST00000641947 RIC3Q7Z5B4 369 aa22.05■■□□□ 1.12
PHGDH-232ENST00000641947 COL5A3P25940 1745 aaPredicted RBP22.05■■□□□ 1.12
PHGDH-232ENST00000641947 RREB1Q92766 1687 aa22.05■■□□□ 1.12
PHGDH-232ENST00000641947 MYH14Q7Z406 1995 aaKnown RBP22.05■■□□□ 1.12
PHGDH-232ENST00000641947 PDE4AP27815 886 aa22.04■■□□□ 1.12
PHGDH-232ENST00000641947 TTLL7Q6ZT98 887 aa22.04■■□□□ 1.12
PHGDH-232ENST00000641947 TRPC5Q9UL62 973 aaPredicted RBP22.04■■□□□ 1.12
PHGDH-232ENST00000641947 ANKRD13DQ6ZTN6 518 aa22.04■■□□□ 1.12
PHGDH-232ENST00000641947 PTF1AQ7RTS3 328 aa22.04■■□□□ 1.12
PHGDH-232ENST00000641947 ALDH1L1O75891 902 aa22.03■■□□□ 1.12
PHGDH-232ENST00000641947 UBTFL1P0CB47 393 aaPredicted RBP22.03■■□□□ 1.12
PHGDH-232ENST00000641947 NUCB1Q02818 461 aa22.03■■□□□ 1.12
PHGDH-232ENST00000641947 FAM182BQ5T319 152 aa22.03■■□□□ 1.12
PHGDH-232ENST00000641947 LINS1Q8NG48 757 aa22.03■■□□□ 1.12
PHGDH-232ENST00000641947 METTL22Q9BUU2 404 aaPredicted RBP22.03■■□□□ 1.12
PHGDH-232ENST00000641947 ZNF831Q5JPB2 1677 aa22.02■■□□□ 1.12
PHGDH-232ENST00000641947 ONECUT3O60422 494 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms