RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 PTPRCP08575 1304 aa22.4■■□□□ 1.18
PHGDH-214ENST00000641314 RBM6P78332 1123 aaKnown RBP22.4■■□□□ 1.18
PHGDH-214ENST00000641314 ANXA1P04083 346 aa22.39■■□□□ 1.18
PHGDH-214ENST00000641314 RBM42Q9BTD8 480 aaKnown RBP22.39■■□□□ 1.18
PHGDH-214ENST00000641314 DBF4Q9UBU7 674 aaPredicted RBP22.39■■□□□ 1.18
PHGDH-214ENST00000641314 USP16Q9Y5T5 823 aa22.39■■□□□ 1.18
PHGDH-214ENST00000641314 KCNQ2O43526 872 aa22.38■■□□□ 1.17
PHGDH-214ENST00000641314 FLIIQ13045 1269 aa22.38■■□□□ 1.17
PHGDH-214ENST00000641314 TMEM57Q8N5G2 664 aa22.38■■□□□ 1.17
PHGDH-214ENST00000641314 ITPRIPQ8IWB1 547 aa22.38■■□□□ 1.17
PHGDH-214ENST00000641314 PHAXQ9H814 394 aaKnown RBP22.38■■□□□ 1.17
PHGDH-214ENST00000641314 FKBP5Q13451 457 aaPredicted RBP22.37■■□□□ 1.17
PHGDH-214ENST00000641314 MVPQ14764 893 aaKnown RBP22.37■■□□□ 1.17
PHGDH-214ENST00000641314 PROSER3Q2NL68 480 aa22.37■■□□□ 1.17
PHGDH-214ENST00000641314 ABCC4O15439 1325 aa22.36■■□□□ 1.17
PHGDH-214ENST00000641314 BRWD3Q6RI45 1802 aa22.36■■□□□ 1.17
PHGDH-214ENST00000641314 RGS12O14924 1447 aa22.36■■□□□ 1.17
PHGDH-214ENST00000641314 DDX21Q9NR30 783 aaKnown RBP eCLIP22.34■■□□□ 1.17
PHGDH-214ENST00000641314 NHSQ6T4R5 1651 aa22.34■■□□□ 1.17
PHGDH-214ENST00000641314 MYL6BP14649 208 aa22.33■■□□□ 1.17
PHGDH-214ENST00000641314 PDIA6Q15084 440 aa22.33■■□□□ 1.17
PHGDH-214ENST00000641314 B4GALNT3Q6L9W6 998 aa22.33■■□□□ 1.17
PHGDH-214ENST00000641314 KRT27Q7Z3Y8 459 aa22.33■■□□□ 1.17
PHGDH-214ENST00000641314 VSIG10Q8N0Z9 540 aa22.33■■□□□ 1.17
PHGDH-214ENST00000641314 F6X3S4 739 aa22.33■■□□□ 1.16
PHGDH-214ENST00000641314 RXRBP28702 533 aa22.33■■□□□ 1.16
PHGDH-214ENST00000641314 PIP4K2AP48426 406 aaPredicted RBP22.33■■□□□ 1.16
PHGDH-214ENST00000641314 DNAJC10Q8IXB1 793 aa22.33■■□□□ 1.16
PHGDH-214ENST00000641314 HYPKQ9NX55 129 aa22.33■■□□□ 1.16
PHGDH-214ENST00000641314 RGS17Q9UGC6 210 aaPredicted RBP22.32■■□□□ 1.16
PHGDH-214ENST00000641314 DDX19BQ9UMR2 479 aa22.32■■□□□ 1.16
PHGDH-214ENST00000641314 SLC4A10Q6U841 1118 aa22.31■■□□□ 1.16
PHGDH-214ENST00000641314 PTF1AQ7RTS3 328 aa22.31■■□□□ 1.16
PHGDH-214ENST00000641314 SMARCC1Q92922 1105 aaPredicted RBP22.31■■□□□ 1.16
PHGDH-214ENST00000641314 CCDC136Q96JN2 1154 aa22.31■■□□□ 1.16
PHGDH-214ENST00000641314 TEX13AQ9BXU3 409 aaPredicted RBP22.31■■□□□ 1.16
PHGDH-214ENST00000641314 PALLDQ8WX93 1383 aa22.31■■□□□ 1.16
PHGDH-214ENST00000641314 SBF2Q86WG5 1849 aa22.31■■□□□ 1.16
PHGDH-214ENST00000641314 SLC4A9Q96Q91 983 aa22.3■■□□□ 1.16
PHGDH-214ENST00000641314 BTAF1O14981 1849 aa22.29■■□□□ 1.16
PHGDH-214ENST00000641314 AIMP1Q12904 312 aaKnown RBP22.29■■□□□ 1.16
PHGDH-214ENST00000641314 TJP1Q07157 1748 aa22.29■■□□□ 1.16
PHGDH-214ENST00000641314 ERBB4Q15303 1308 aa22.29■■□□□ 1.16
PHGDH-214ENST00000641314 A1BGP04217 495 aa22.29■■□□□ 1.16
PHGDH-214ENST00000641314 POTEAQ6S8J7 498 aa22.29■■□□□ 1.16
PHGDH-214ENST00000641314 INTS3Q68E01 1043 aaKnown RBP22.28■■□□□ 1.16
PHGDH-214ENST00000641314 LOC102724428A0A0B4J2F2 783 aa22.27■■□□□ 1.16
PHGDH-214ENST00000641314 NBPF26B4DH59 902 aa22.27■■□□□ 1.16
PHGDH-214ENST00000641314 STARD3NLO95772 234 aa22.27■■□□□ 1.16
PHGDH-214ENST00000641314 SIK1P57059 783 aa22.27■■□□□ 1.16
PHGDH-214ENST00000641314 NBPF14Q5TI25 921 aa22.27■■□□□ 1.16
PHGDH-214ENST00000641314 NBPF10Q6P3W6 841 aaKnown RBP22.27■■□□□ 1.16
PHGDH-214ENST00000641314 FAM196AQ6ZSG2 479 aa22.27■■□□□ 1.16
PHGDH-214ENST00000641314 NBPF15Q8N660 670 aa22.27■■□□□ 1.16
PHGDH-214ENST00000641314 XAGE3Q8WTP9 111 aa22.27■■□□□ 1.16
PHGDH-214ENST00000641314 ATP6V1AP38606 617 aa22.26■■□□□ 1.15
PHGDH-214ENST00000641314 PI4KAP2A4QPH2 592 aa22.25■■□□□ 1.15
PHGDH-214ENST00000641314 DDX58O95786 925 aaKnown RBP22.25■■□□□ 1.15
PHGDH-214ENST00000641314 CCT4P50991 539 aaKnown RBP22.25■■□□□ 1.15
PHGDH-214ENST00000641314 COPS6Q7L5N1 327 aa22.25■■□□□ 1.15
PHGDH-214ENST00000641314 PI4KAP1Q8N8J0 262 aa22.25■■□□□ 1.15
PHGDH-214ENST00000641314 ADCY9O60503 1353 aa22.25■■□□□ 1.15
PHGDH-214ENST00000641314 LRP10Q7Z4F1 713 aa22.25■■□□□ 1.15
PHGDH-214ENST00000641314 PXDNLA1KZ92 1463 aa22.25■■□□□ 1.15
PHGDH-214ENST00000641314 CYP19A1P11511 503 aaPredicted RBP22.24■■□□□ 1.15
PHGDH-214ENST00000641314 AAMPQ13685 434 aa22.24■■□□□ 1.15
PHGDH-214ENST00000641314 DNAAF4Q8WXU2 420 aa22.24■■□□□ 1.15
PHGDH-214ENST00000641314 MAP3K2Q9Y2U5 619 aa22.24■■□□□ 1.15
PHGDH-214ENST00000641314 KSR2Q6VAB6 950 aa22.23■■□□□ 1.15
PHGDH-214ENST00000641314 CHMP4BQ9H444 224 aaKnown RBP22.23■■□□□ 1.15
PHGDH-214ENST00000641314 N4BP2Q86UW6 1770 aaPredicted RBP22.22■■□□□ 1.15
PHGDH-214ENST00000641314 ZBTB7BO15156 539 aaPredicted RBP22.22■■□□□ 1.15
PHGDH-214ENST00000641314 BCL11BQ9C0K0 894 aaPredicted RBP22.22■■□□□ 1.15
PHGDH-214ENST00000641314 ZNF330Q9Y3S2 320 aaPredicted RBP22.22■■□□□ 1.15
PHGDH-214ENST00000641314 ITPK1Q13572 414 aa22.21■■□□□ 1.15
PHGDH-214ENST00000641314 RIC3Q7Z5B4 369 aa22.21■■□□□ 1.15
PHGDH-214ENST00000641314 ZBTB40Q9NUA8 1239 aa22.21■■□□□ 1.15
PHGDH-214ENST00000641314 CICQ96RK0 1608 aaPredicted RBP22.21■■□□□ 1.15
PHGDH-214ENST00000641314 TRIM37O94972 964 aa22.2■■□□□ 1.14
PHGDH-214ENST00000641314 ANKRD13DQ6ZTN6 518 aa22.19■■□□□ 1.14
PHGDH-214ENST00000641314 SRCIN1Q9C0H9 1055 aa22.19■■□□□ 1.14
PHGDH-214ENST00000641314 ZBTB1Q9Y2K1 713 aa22.19■■□□□ 1.14
PHGDH-214ENST00000641314 PCDHB15Q9Y5E8 787 aa22.19■■□□□ 1.14
PHGDH-214ENST00000641314 ZNF831Q5JPB2 1677 aa22.18■■□□□ 1.14
PHGDH-214ENST00000641314 KCNQ4P56696 695 aa22.18■■□□□ 1.14
PHGDH-214ENST00000641314 TTLL7Q6ZT98 887 aa22.18■■□□□ 1.14
PHGDH-214ENST00000641314 CRKLP46109 303 aaKnown RBP22.17■■□□□ 1.14
PHGDH-214ENST00000641314 BEND3Q5T5X7 828 aa22.17■■□□□ 1.14
PHGDH-214ENST00000641314 MEIS3Q99687 375 aa22.17■■□□□ 1.14
PHGDH-214ENST00000641314 C1orf115Q9H7X2 142 aa22.17■■□□□ 1.14
PHGDH-214ENST00000641314 ATP10DQ9P241 1426 aa22.17■■□□□ 1.14
PHGDH-214ENST00000641314 ARFGEF2Q9Y6D5 1785 aa22.17■■□□□ 1.14
PHGDH-214ENST00000641314 CCDC87Q9NVE4 849 aa22.16■■□□□ 1.14
PHGDH-214ENST00000641314 LY75O60449 1722 aa22.16■■□□□ 1.14
PHGDH-214ENST00000641314 COL5A3P25940 1745 aaPredicted RBP22.16■■□□□ 1.14
PHGDH-214ENST00000641314 PLBD2Q8NHP8 589 aa22.16■■□□□ 1.14
PHGDH-214ENST00000641314 CCNL1Q9UK58 526 aaPredicted RBP22.16■■□□□ 1.14
PHGDH-214ENST00000641314 INTS5Q6P9B9 1019 aaKnown RBP22.15■■□□□ 1.14
PHGDH-214ENST00000641314 LINC00116Q8NCU8 138 aa22.15■■□□□ 1.14
PHGDH-214ENST00000641314 ARXQ96QS3 562 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms