RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ZNF831Q5JPB2 1677 aa13.51□□□□□ -0.25
PHGDH-212ENST00000641247 CNTNAP1P78357 1384 aa13.51□□□□□ -0.25
PHGDH-212ENST00000641247 DDNO94850 711 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-212ENST00000641247 SERPINB2P05120 415 aa13.51□□□□□ -0.25
PHGDH-212ENST00000641247 VEGFBP49765 207 aa13.51□□□□□ -0.25
PHGDH-212ENST00000641247 LBX1P52954 281 aa13.51□□□□□ -0.25
PHGDH-212ENST00000641247 C2CD5Q86YS7 1000 aa13.51□□□□□ -0.25
PHGDH-212ENST00000641247 ADAMTS7Q9UKP4 1686 aa13.5□□□□□ -0.25
PHGDH-212ENST00000641247 SOS1Q07889 1333 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-212ENST00000641247 PASKQ96RG2 1323 aa13.5□□□□□ -0.25
PHGDH-212ENST00000641247 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-212ENST00000641247 CTCFP49711 727 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-212ENST00000641247 MTHFSP49914 203 aa13.49□□□□□ -0.25
PHGDH-212ENST00000641247 DPY19L2Q6NUT2 758 aa13.49□□□□□ -0.25
PHGDH-212ENST00000641247 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-212ENST00000641247 AEBP1Q8IUX7 1158 aa13.49□□□□□ -0.25
PHGDH-212ENST00000641247 ABHD8Q96I13 439 aa13.49□□□□□ -0.25
PHGDH-212ENST00000641247 WBP1LQ9NX94 342 aa13.49□□□□□ -0.25
PHGDH-212ENST00000641247 C21orf2O43822 256 aa13.48□□□□□ -0.25
PHGDH-212ENST00000641247 ZPR1O75312 459 aa13.48□□□□□ -0.25
PHGDH-212ENST00000641247 ITGBL1O95965 494 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-212ENST00000641247 HSP90AB1P08238 724 aaKnown RBP13.48□□□□□ -0.25
PHGDH-212ENST00000641247 TNNT2P45379 298 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-212ENST00000641247 ERFEQ4G0M1 354 aa13.48□□□□□ -0.25
PHGDH-212ENST00000641247 PLEKHO1Q53GL0 409 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-212ENST00000641247 CCDC24Q8N4L8 307 aa13.48□□□□□ -0.25
PHGDH-212ENST00000641247 NARFQ9UHQ1 456 aa13.48□□□□□ -0.25
PHGDH-212ENST00000641247 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
PHGDH-212ENST00000641247 CYP19A1P11511 503 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-212ENST00000641247 ZBTB1Q9Y2K1 713 aa13.47□□□□□ -0.25
PHGDH-212ENST00000641247 H0YIN7 160 aa13.46□□□□□ -0.25
PHGDH-212ENST00000641247 HSPA8P11142 646 aaKnown RBP13.46□□□□□ -0.25
PHGDH-212ENST00000641247 SLC39A6Q13433 755 aa13.46□□□□□ -0.25
PHGDH-212ENST00000641247 TJP1Q07157 1748 aa13.45□□□□□ -0.26
PHGDH-212ENST00000641247 BICDL1Q6ZP65 573 aa13.45□□□□□ -0.26
PHGDH-212ENST00000641247 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.262e-6■■■□□ 15.2
PHGDH-212ENST00000641247 LGR6Q9HBX8 967 aa13.45□□□□□ -0.26
PHGDH-212ENST00000641247 KIF20BQ96Q89 1820 aa13.44□□□□□ -0.26
PHGDH-212ENST00000641247 AMOTQ4VCS5 1084 aa13.44□□□□□ -0.26
PHGDH-212ENST00000641247 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
PHGDH-212ENST00000641247 TMEM88BA6NKF7 163 aa13.43□□□□□ -0.26
PHGDH-212ENST00000641247 TIAM2Q8IVF5 1701 aa13.43□□□□□ -0.26
PHGDH-212ENST00000641247 AIDAQ96BJ3 306 aa13.43□□□□□ -0.26
PHGDH-212ENST00000641247 TAF1DQ9H5J8 278 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-212ENST00000641247 COL15A1P39059 1388 aa13.43□□□□□ -0.26
PHGDH-212ENST00000641247 NRXN2Q9P2S2 1712 aa13.42□□□□□ -0.26
PHGDH-212ENST00000641247 RGS19P49795 217 aa13.42□□□□□ -0.26
PHGDH-212ENST00000641247 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
PHGDH-212ENST00000641247 LDHDQ86WU2 507 aa13.42□□□□□ -0.26
PHGDH-212ENST00000641247 PRR5LQ6MZQ0 368 aa13.41□□□□□ -0.26
PHGDH-212ENST00000641247 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
PHGDH-212ENST00000641247 AFDNP55196 1824 aaKnown RBP13.41□□□□□ -0.26
PHGDH-212ENST00000641247 RASSF10A6NK89 507 aa13.4□□□□□ -0.26
PHGDH-212ENST00000641247 CCDC85CA6NKD9 419 aa13.4□□□□□ -0.26
PHGDH-212ENST00000641247 CANXP27824 592 aaKnown RBP13.4□□□□□ -0.26
PHGDH-212ENST00000641247 C1orf141Q5JVX7 400 aa13.4□□□□□ -0.26
PHGDH-212ENST00000641247 L3MBTL3Q96JM7 780 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-212ENST00000641247 BRIP1Q9BX63 1249 aa13.4□□□□□ -0.26
PHGDH-212ENST00000641247 TAOK3Q9H2K8 898 aa13.4□□□□□ -0.26
PHGDH-212ENST00000641247 SLC52A2Q9HAB3 445 aa13.4□□□□□ -0.26
PHGDH-212ENST00000641247 LTBP3Q9NS15 1303 aa13.39□□□□□ -0.27
PHGDH-212ENST00000641247 EIF5P55010 431 aaKnown RBP13.39□□□□□ -0.27
PHGDH-212ENST00000641247 MLLT1Q03111 559 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-212ENST00000641247 FMR1Q06787 632 aaKnown RBP eCLIP13.39□□□□□ -0.278e-7■■□□□ 12
PHGDH-212ENST00000641247 DEFB115Q30KQ5 88 aa13.39□□□□□ -0.27
PHGDH-212ENST00000641247 EAPPQ56P03 285 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-212ENST00000641247 SULT6B1Q6IMI4 303 aa13.39□□□□□ -0.27
PHGDH-212ENST00000641247 WDR33Q9C0J8 1336 aaKnown RBP13.39□□□□□ -0.27
PHGDH-212ENST00000641247 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
PHGDH-212ENST00000641247 CDCA8Q53HL2 280 aa13.38□□□□□ -0.27
PHGDH-212ENST00000641247 MAP1SQ66K74 1059 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-212ENST00000641247 C7orf43Q8WVR3 580 aa13.38□□□□□ -0.27
PHGDH-212ENST00000641247 CCDC88AQ3V6T2 1871 aa13.38□□□□□ -0.27
PHGDH-212ENST00000641247 DLEC1Q9Y238 1755 aa13.37□□□□□ -0.27
PHGDH-212ENST00000641247 RNMTO43148 476 aaKnown RBP13.37□□□□□ -0.27
PHGDH-212ENST00000641247 PDE6BP35913 854 aa13.37□□□□□ -0.27
PHGDH-212ENST00000641247 OLFM4Q6UX06 510 aa13.37□□□□□ -0.27
PHGDH-212ENST00000641247 CNTROBQ8N137 903 aa13.37□□□□□ -0.27
PHGDH-212ENST00000641247 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
PHGDH-212ENST00000641247 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
PHGDH-212ENST00000641247 IQCA1LA6NCM1 817 aa13.36□□□□□ -0.27
PHGDH-212ENST00000641247 SRGNP10124 158 aa13.36□□□□□ -0.27
PHGDH-212ENST00000641247 PRPF40BQ6NWY9 871 aaKnown RBP13.36□□□□□ -0.27
PHGDH-212ENST00000641247 EPHX2P34913 555 aa13.35□□□□□ -0.27
PHGDH-212ENST00000641247 IL13P35225 146 aa13.35□□□□□ -0.27
PHGDH-212ENST00000641247 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
PHGDH-212ENST00000641247 TSKSQ9UJT2 592 aa13.35□□□□□ -0.27
PHGDH-212ENST00000641247 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-212ENST00000641247 CNKSR1Q969H4 720 aa13.34□□□□□ -0.27
PHGDH-212ENST00000641247 ZNF277Q9NRM2 450 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-212ENST00000641247 HACL1Q9UJ83 578 aa13.34□□□□□ -0.27
PHGDH-212ENST00000641247 RNF123Q5XPI4 1314 aa13.34□□□□□ -0.27
PHGDH-212ENST00000641247 VIRMAQ69YN4 1812 aaKnown RBP13.34□□□□□ -0.27
PHGDH-212ENST00000641247 FER1L6Q2WGJ9 1857 aa13.33□□□□□ -0.27
PHGDH-212ENST00000641247 ANKRD31Q8N7Z5 1873 aa13.33□□□□□ -0.27
PHGDH-212ENST00000641247 STYK1Q6J9G0 422 aa13.33□□□□□ -0.28
PHGDH-212ENST00000641247 CYP4F22Q6NT55 531 aa13.33□□□□□ -0.28
PHGDH-212ENST00000641247 VSIG10Q8N0Z9 540 aa13.33□□□□□ -0.28
PHGDH-212ENST00000641247 PDZRN3Q9UPQ7 1066 aa13.33□□□□□ -0.28
PHGDH-212ENST00000641247 CCER1Q8TC90 406 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1672.9 ms