RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 PUS7Q96PZ0 661 aaKnown RBP11.53□□□□□ -0.56
SCARB2-226ENST00000640916 TMOD3Q9NYL9 352 aa11.53□□□□□ -0.56
SCARB2-226ENST00000640916 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.56
SCARB2-226ENST00000640916 FYB1O15117 783 aa11.52□□□□□ -0.57
SCARB2-226ENST00000640916 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
SCARB2-226ENST00000640916 POTEJP0CG39 1038 aa11.52□□□□□ -0.57
SCARB2-226ENST00000640916 LMNB1P20700 586 aa11.52□□□□□ -0.57
SCARB2-226ENST00000640916 RFC4P35249 363 aa11.52□□□□□ -0.57
SCARB2-226ENST00000640916 CTCFP49711 727 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-226ENST00000640916 VASPP50552 380 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-226ENST00000640916 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCARB2-226ENST00000640916 LBX1P52954 281 aa11.52□□□□□ -0.57
SCARB2-226ENST00000640916 CHRDL2Q6WN34 429 aa11.52□□□□□ -0.57
SCARB2-226ENST00000640916 WBP1LQ9NX94 342 aa11.52□□□□□ -0.57
SCARB2-226ENST00000640916 CNTNAP4Q9C0A0 1308 aa11.52□□□□□ -0.57
SCARB2-226ENST00000640916 TNRC18O15417 2968 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-226ENST00000640916 NRXN2Q9P2S2 1712 aa11.52□□□□□ -0.57
SCARB2-226ENST00000640916 TM4SF1P30408 202 aa11.51□□□□□ -0.57
SCARB2-226ENST00000640916 SRP68Q9UHB9 627 aaKnown RBP11.51□□□□□ -0.57
SCARB2-226ENST00000640916 POLRMTO00411 1230 aaKnown RBP11.5□□□□□ -0.57
SCARB2-226ENST00000640916 VEGFBP49765 207 aa11.5□□□□□ -0.57
SCARB2-226ENST00000640916 GGNBP2Q9H3C7 697 aa11.5□□□□□ -0.57
SCARB2-226ENST00000640916 PASKQ96RG2 1323 aa11.5□□□□□ -0.57
SCARB2-226ENST00000640916 FLT4P35916 1363 aa11.5□□□□□ -0.57
SCARB2-226ENST00000640916 FER1L6Q2WGJ9 1857 aa11.49□□□□□ -0.57
SCARB2-226ENST00000640916 NFKBIEO00221 500 aa11.49□□□□□ -0.57
SCARB2-226ENST00000640916 HSPA8P11142 646 aaKnown RBP11.49□□□□□ -0.57
SCARB2-226ENST00000640916 PHKG2P15735 406 aa11.49□□□□□ -0.57
SCARB2-226ENST00000640916 MLLT1Q03111 559 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-226ENST00000640916 CHADLQ6NUI6 762 aa11.49□□□□□ -0.57
SCARB2-226ENST00000640916 SIN3AQ96ST3 1273 aa11.49□□□□□ -0.57
SCARB2-226ENST00000640916 SPG7Q9UQ90 795 aa11.49□□□□□ -0.57
SCARB2-226ENST00000640916 CLEC11AQ9Y240 323 aa11.49□□□□□ -0.57
SCARB2-226ENST00000640916 USP42Q9H9J4 1324 aaKnown RBP11.49□□□□□ -0.57
SCARB2-226ENST00000640916 TONSLQ96HA7 1378 aa11.49□□□□□ -0.57
SCARB2-226ENST00000640916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.48□□□□□ -0.57
SCARB2-226ENST00000640916 KIF24Q5T7B8 1368 aa11.48□□□□□ -0.57
SCARB2-226ENST00000640916 TJP1Q07157 1748 aa11.48□□□□□ -0.57
SCARB2-226ENST00000640916 ANKRD26Q9UPS8 1709 aa11.48□□□□□ -0.57
SCARB2-226ENST00000640916 KIF20BQ96Q89 1820 aa11.47□□□□□ -0.57
SCARB2-226ENST00000640916 TESK2Q96S53 571 aa11.47□□□□□ -0.57
SCARB2-226ENST00000640916 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.57
SCARB2-226ENST00000640916 IFNL2Q8IZJ0 200 aa11.46□□□□□ -0.57
SCARB2-226ENST00000640916 ITGBL1O95965 494 aaPredicted RBP11.45□□□□□ -0.58
SCARB2-226ENST00000640916 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
SCARB2-226ENST00000640916 CRKLP46109 303 aaKnown RBP11.45□□□□□ -0.58
SCARB2-226ENST00000640916 AIDAQ96BJ3 306 aa11.45□□□□□ -0.58
SCARB2-226ENST00000640916 EYA1Q99502 592 aa11.45□□□□□ -0.58
SCARB2-226ENST00000640916 EMILIN1Q9Y6C2 1016 aa11.45□□□□□ -0.58
SCARB2-226ENST00000640916 ANKRD31Q8N7Z5 1873 aa11.44□□□□□ -0.58
SCARB2-226ENST00000640916 ADAMTSL1Q8N6G6 1762 aa11.44□□□□□ -0.58
SCARB2-226ENST00000640916 INTS5Q6P9B9 1019 aaKnown RBP11.44□□□□□ -0.58
SCARB2-226ENST00000640916 CARD11Q9BXL7 1154 aa11.44□□□□□ -0.58
SCARB2-226ENST00000640916 SCN4AP35499 1836 aa11.44□□□□□ -0.58
SCARB2-226ENST00000640916 CCDC85CA6NKD9 419 aa11.43□□□□□ -0.58
SCARB2-226ENST00000640916 ERVV-2B6SEH9 535 aa11.43□□□□□ -0.58
SCARB2-226ENST00000640916 DDNO94850 711 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-226ENST00000640916 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
SCARB2-226ENST00000640916 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
SCARB2-226ENST00000640916 TTLL6Q8N841 843 aa11.43□□□□□ -0.58
SCARB2-226ENST00000640916 CARMIL3Q8ND23 1372 aa11.42□□□□□ -0.58
SCARB2-226ENST00000640916 THSD7BQ9C0I4 1608 aa11.42□□□□□ -0.58
SCARB2-226ENST00000640916 TMEM88BA6NKF7 163 aa11.42□□□□□ -0.58
SCARB2-226ENST00000640916 NFIXQ14938 502 aa11.42□□□□□ -0.58
SCARB2-226ENST00000640916 USPL1Q5W0Q7 1092 aa11.42□□□□□ -0.58
SCARB2-226ENST00000640916 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
SCARB2-226ENST00000640916 COL11A2P13942 1736 aaPredicted RBP11.41□□□□□ -0.58
SCARB2-226ENST00000640916 RASSF10A6NK89 507 aa11.41□□□□□ -0.58
SCARB2-226ENST00000640916 ERFEQ4G0M1 354 aa11.41□□□□□ -0.58
SCARB2-226ENST00000640916 BCL2L12Q9HB09 334 aa11.41□□□□□ -0.58
SCARB2-226ENST00000640916 WASHC2AQ641Q2 1341 aa11.4□□□□□ -0.58
SCARB2-226ENST00000640916 PTCD1O75127 700 aaKnown RBP11.4□□□□□ -0.58
SCARB2-226ENST00000640916 LDHDQ86WU2 507 aa11.4□□□□□ -0.58
SCARB2-226ENST00000640916 SLX4Q8IY92 1834 aa11.39□□□□□ -0.59
SCARB2-226ENST00000640916 NEUROD1Q13562 356 aa11.39□□□□□ -0.59
SCARB2-226ENST00000640916 CACNA1SQ13698 1873 aa11.39□□□□□ -0.59
SCARB2-226ENST00000640916 C2CD5Q86YS7 1000 aa11.39□□□□□ -0.59
SCARB2-226ENST00000640916 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
SCARB2-226ENST00000640916 TAF1DQ9H5J8 278 aaPredicted RBP11.39□□□□□ -0.59
SCARB2-226ENST00000640916 SOS1Q07889 1333 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-226ENST00000640916 WDR33Q9C0J8 1336 aaKnown RBP11.38□□□□□ -0.59
SCARB2-226ENST00000640916 LTBP3Q9NS15 1303 aa11.38□□□□□ -0.59
SCARB2-226ENST00000640916 ST20-MTHFSA0A0A6YYL1 179 aa11.38□□□□□ -0.59
SCARB2-226ENST00000640916 SERPINB2P05120 415 aa11.38□□□□□ -0.59
SCARB2-226ENST00000640916 DEFB115Q30KQ5 88 aa11.38□□□□□ -0.59
SCARB2-226ENST00000640916 CARD14Q9BXL6 1004 aa11.38□□□□□ -0.59
SCARB2-226ENST00000640916 PDE4DIPQ5VU43 2346 aa11.38□□□□□ -0.59
SCARB2-226ENST00000640916 CASP8AP2Q9UKL3 1982 aa11.37□□□□□ -0.59
SCARB2-226ENST00000640916 ARFGEF2Q9Y6D5 1785 aa11.37□□□□□ -0.59
SCARB2-226ENST00000640916 H0YIN7 160 aa11.37□□□□□ -0.59
SCARB2-226ENST00000640916 C21orf2O43822 256 aa11.37□□□□□ -0.59
SCARB2-226ENST00000640916 MAP2K1Q02750 393 aaPredicted RBP11.37□□□□□ -0.59
SCARB2-226ENST00000640916 NARFQ9UHQ1 456 aa11.37□□□□□ -0.59
SCARB2-226ENST00000640916 LTBP1Q14766 1721 aa11.37□□□□□ -0.59
SCARB2-226ENST00000640916 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
SCARB2-226ENST00000640916 PPM1GO15355 546 aaPredicted RBP11.36□□□□□ -0.59
SCARB2-226ENST00000640916 ZPR1O75312 459 aa11.36□□□□□ -0.59
SCARB2-226ENST00000640916 CABP4P57796 275 aa11.36□□□□□ -0.59
SCARB2-226ENST00000640916 EIF4A2Q14240 407 aaKnown RBP11.35□□□□□ -0.59
SCARB2-226ENST00000640916 DNAJC10Q8IXB1 793 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms