RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 PPM1GO15355 546 aaPredicted RBP20.34■□□□□ 0.85
KCNC1-213ENST00000640909 NFKBIEO00221 500 aa20.33■□□□□ 0.85
KCNC1-213ENST00000640909 ZPR1O75312 459 aa20.33■□□□□ 0.85
KCNC1-213ENST00000640909 CABP4P57796 275 aa20.33■□□□□ 0.85
KCNC1-213ENST00000640909 FER1L6Q2WGJ9 1857 aa20.33■□□□□ 0.84
KCNC1-213ENST00000640909 FAM161AQ3B820 660 aa20.32■□□□□ 0.84
KCNC1-213ENST00000640909 CDCA8Q53HL2 280 aa20.32■□□□□ 0.84
KCNC1-213ENST00000640909 PASKQ96RG2 1323 aa20.3■□□□□ 0.84
KCNC1-213ENST00000640909 SCN4AP35499 1836 aa20.3■□□□□ 0.84
KCNC1-213ENST00000640909 AMOTQ4VCS5 1084 aa20.3■□□□□ 0.84
KCNC1-213ENST00000640909 PTCD1O75127 700 aaKnown RBP20.29■□□□□ 0.84
KCNC1-213ENST00000640909 PLEKHO1Q53GL0 409 aaPredicted RBP20.29■□□□□ 0.84
KCNC1-213ENST00000640909 USPL1Q5W0Q7 1092 aa20.29■□□□□ 0.84
KCNC1-213ENST00000640909 ABHD8Q96I13 439 aa20.29■□□□□ 0.84
KCNC1-213ENST00000640909 WBP1LQ9NX94 342 aa20.29■□□□□ 0.84
KCNC1-213ENST00000640909 PDZRN3Q9UPQ7 1066 aa20.29■□□□□ 0.84
KCNC1-213ENST00000640909 SOS1Q07889 1333 aaPredicted RBP20.28■□□□□ 0.84
KCNC1-213ENST00000640909 LTBP3Q9NS15 1303 aa20.28■□□□□ 0.84
KCNC1-213ENST00000640909 H0YIN7 160 aa20.28■□□□□ 0.84
KCNC1-213ENST00000640909 ERFEQ4G0M1 354 aa20.28■□□□□ 0.84
KCNC1-213ENST00000640909 INTS5Q6P9B9 1019 aaKnown RBP20.28■□□□□ 0.84
KCNC1-213ENST00000640909 IQCA1LA6NCM1 817 aa20.27■□□□□ 0.84
KCNC1-213ENST00000640909 EIF4A2Q14240 407 aaKnown RBP20.27■□□□□ 0.84
KCNC1-213ENST00000640909 NFIXQ14938 502 aa20.27■□□□□ 0.84
KCNC1-213ENST00000640909 LDHDQ86WU2 507 aa20.27■□□□□ 0.84
KCNC1-213ENST00000640909 POLKQ9UBT6 870 aa20.27■□□□□ 0.84
KCNC1-213ENST00000640909 NARFQ9UHQ1 456 aa20.27■□□□□ 0.84
KCNC1-213ENST00000640909 SCN11AQ9UI33 1791 aa20.26■□□□□ 0.83
KCNC1-213ENST00000640909 C2CD5Q86YS7 1000 aa20.26■□□□□ 0.83
KCNC1-213ENST00000640909 CARD14Q9BXL6 1004 aa20.26■□□□□ 0.83
KCNC1-213ENST00000640909 COL15A1P39059 1388 aa20.25■□□□□ 0.83
KCNC1-213ENST00000640909 TMEM88BA6NKF7 163 aa20.25■□□□□ 0.83
KCNC1-213ENST00000640909 SERPINB2P05120 415 aa20.25■□□□□ 0.83
KCNC1-213ENST00000640909 VEGFBP49765 207 aa20.25■□□□□ 0.83
KCNC1-213ENST00000640909 MTHFSP49914 203 aa20.25■□□□□ 0.83
KCNC1-213ENST00000640909 LBX1P52954 281 aa20.25■□□□□ 0.83
KCNC1-213ENST00000640909 ZNF530Q6P9A1 599 aaPredicted RBP20.25■□□□□ 0.83
KCNC1-213ENST00000640909 RGS19P49795 217 aa20.24■□□□□ 0.83
KCNC1-213ENST00000640909 MLLT1Q03111 559 aaPredicted RBP20.24■□□□□ 0.83
KCNC1-213ENST00000640909 ANKRD31Q8N7Z5 1873 aa20.24■□□□□ 0.83
KCNC1-213ENST00000640909 ARFGEF2Q9Y6D5 1785 aa20.23■□□□□ 0.83
KCNC1-213ENST00000640909 POTEIP0CG38 1075 aa20.23■□□□□ 0.83
KCNC1-213ENST00000640909 POTEJP0CG39 1038 aa20.23■□□□□ 0.83
KCNC1-213ENST00000640909 COL11A2P13942 1736 aaPredicted RBP20.23■□□□□ 0.83
KCNC1-213ENST00000640909 C1orf141Q5JVX7 400 aa20.23■□□□□ 0.83
KCNC1-213ENST00000640909 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
KCNC1-213ENST00000640909 THSD7BQ9C0I4 1608 aa20.23■□□□□ 0.83
KCNC1-213ENST00000640909 CARMIL3Q8ND23 1372 aa20.22■□□□□ 0.83
KCNC1-213ENST00000640909 HSPA8P11142 646 aaKnown RBP20.22■□□□□ 0.83
KCNC1-213ENST00000640909 L3MBTL3Q96JM7 780 aaPredicted RBP20.22■□□□□ 0.83
KCNC1-213ENST00000640909 TAOK3Q9H2K8 898 aa20.22■□□□□ 0.83
KCNC1-213ENST00000640909 ADAMTSL1Q8N6G6 1762 aa20.21■□□□□ 0.83
KCNC1-213ENST00000640909 RASSF10A6NK89 507 aa20.21■□□□□ 0.83
KCNC1-213ENST00000640909 MAP2K1Q02750 393 aaPredicted RBP20.21■□□□□ 0.83
KCNC1-213ENST00000640909 DDNO94850 711 aaPredicted RBP20.2■□□□□ 0.82
KCNC1-213ENST00000640909 SOGA3Q5TF21 947 aa20.2■□□□□ 0.82
KCNC1-213ENST00000640909 MRC1P22897 1456 aa20.19■□□□□ 0.82
KCNC1-213ENST00000640909 ITGBL1O95965 494 aaPredicted RBP20.19■□□□□ 0.82
KCNC1-213ENST00000640909 PDE6BP35913 854 aa20.19■□□□□ 0.82
KCNC1-213ENST00000640909 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
KCNC1-213ENST00000640909 C21orf2O43822 256 aa20.18■□□□□ 0.82
KCNC1-213ENST00000640909 CYP19A1P11511 503 aaPredicted RBP20.18■□□□□ 0.82
KCNC1-213ENST00000640909 DNAJC10Q8IXB1 793 aa20.18■□□□□ 0.82
KCNC1-213ENST00000640909 BRIP1Q9BX63 1249 aa20.18■□□□□ 0.82
KCNC1-213ENST00000640909 TAF1DQ9H5J8 278 aaPredicted RBP20.18■□□□□ 0.82
KCNC1-213ENST00000640909 BCL2L12Q9HB09 334 aa20.18■□□□□ 0.82
KCNC1-213ENST00000640909 ZNF622Q969S3 477 aaKnown RBP eCLIP20.16■□□□□ 0.82
KCNC1-213ENST00000640909 DEFB115Q30KQ5 88 aa20.15■□□□□ 0.82
KCNC1-213ENST00000640909 ZBTB1Q9Y2K1 713 aa20.15■□□□□ 0.82
KCNC1-213ENST00000640909 CACNA1SQ13698 1873 aa20.14■□□□□ 0.81
KCNC1-213ENST00000640909 UBR2Q8IWV8 1755 aa20.14■□□□□ 0.81
KCNC1-213ENST00000640909 VSIG10Q8N0Z9 540 aa20.14■□□□□ 0.81
KCNC1-213ENST00000640909 CNKSR1Q969H4 720 aa20.14■□□□□ 0.81
KCNC1-213ENST00000640909 WDR33Q9C0J8 1336 aaKnown RBP20.13■□□□□ 0.81
KCNC1-213ENST00000640909 SLC52A2Q9HAB3 445 aa20.13■□□□□ 0.81
KCNC1-213ENST00000640909 SLX4Q8IY92 1834 aa20.12■□□□□ 0.81
KCNC1-213ENST00000640909 CCDC85CA6NKD9 419 aa20.12■□□□□ 0.81
KCNC1-213ENST00000640909 PNMA8AQ86V59 439 aaPredicted RBP20.12■□□□□ 0.81
KCNC1-213ENST00000640909 A0A087WZG4 1122 aa20.11■□□□□ 0.81
KCNC1-213ENST00000640909 STYK1Q6J9G0 422 aa20.11■□□□□ 0.81
KCNC1-213ENST00000640909 AKAP4Q5JQC9 854 aa20.1■□□□□ 0.81
KCNC1-213ENST00000640909 BEGAINQ9BUH8 593 aa20.1■□□□□ 0.81
KCNC1-213ENST00000640909 HACL1Q9UJ83 578 aa20.1■□□□□ 0.81
KCNC1-213ENST00000640909 EAPPQ56P03 285 aaPredicted RBP20.09■□□□□ 0.81
KCNC1-213ENST00000640909 PRR5LQ6MZQ0 368 aa20.09■□□□□ 0.81
KCNC1-213ENST00000640909 ZNF219Q9P2Y4 722 aaPredicted RBP20.09■□□□□ 0.81
KCNC1-213ENST00000640909 EPHX2P34913 555 aa20.08■□□□□ 0.81
KCNC1-213ENST00000640909 EIF5P55010 431 aaKnown RBP20.08■□□□□ 0.81
KCNC1-213ENST00000640909 PRPF40BQ6NWY9 871 aaKnown RBP20.08■□□□□ 0.81
KCNC1-213ENST00000640909 ECE1P42892 770 aa20.07■□□□□ 0.8
KCNC1-213ENST00000640909 BICDL1Q6ZP65 573 aa20.07■□□□□ 0.8
KCNC1-213ENST00000640909 AEBP1Q8IUX7 1158 aa20.07■□□□□ 0.8
KCNC1-213ENST00000640909 CNTROBQ8N137 903 aa20.07■□□□□ 0.8
KCNC1-213ENST00000640909 MASTLQ96GX5 879 aa20.07■□□□□ 0.8
KCNC1-213ENST00000640909 CLEC11AQ9Y240 323 aa20.07■□□□□ 0.8
KCNC1-213ENST00000640909 SRGNP10124 158 aa20.06■□□□□ 0.8
KCNC1-213ENST00000640909 TNNT2P45379 298 aaPredicted RBP20.06■□□□□ 0.8
KCNC1-213ENST00000640909 TBC1D9BQ66K14 1250 aa20.06■□□□□ 0.8
KCNC1-213ENST00000640909 ABT1Q9ULW3 272 aaKnown RBP20.06■□□□□ 0.8
KCNC1-213ENST00000640909 LTBP1Q14766 1721 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms