RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 KIAA1551Q9HCM1 1747 aa18.41■□□□□ 0.54
RTTN-221ENST00000640736 FKBP8Q14318 412 aa18.41■□□□□ 0.54
RTTN-221ENST00000640736 VSIG10Q8N0Z9 540 aa18.41■□□□□ 0.54
RTTN-221ENST00000640736 ZBTB1Q9Y2K1 713 aa18.41■□□□□ 0.54
RTTN-221ENST00000640736 SOS1Q07889 1333 aaPredicted RBP18.41■□□□□ 0.54
RTTN-221ENST00000640736 FCHSD2O94868 740 aa18.4■□□□□ 0.54
RTTN-221ENST00000640736 ZNF790Q6PG37 636 aa18.4■□□□□ 0.54
RTTN-221ENST00000640736 ZNF496Q96IT1 587 aaPredicted RBP18.4■□□□□ 0.54
RTTN-221ENST00000640736 CEMIPQ8WUJ3 1361 aa18.4■□□□□ 0.54
RTTN-221ENST00000640736 C10orf71Q711Q0 1435 aa18.4■□□□□ 0.54
RTTN-221ENST00000640736 PXDNLA1KZ92 1463 aa18.39■□□□□ 0.54
RTTN-221ENST00000640736 ZPR1O75312 459 aa18.39■□□□□ 0.53
RTTN-221ENST00000640736 USPL1Q5W0Q7 1092 aa18.39■□□□□ 0.53
RTTN-221ENST00000640736 SPINK5Q9NQ38 1064 aaPredicted RBP18.39■□□□□ 0.53
RTTN-221ENST00000640736 COL15A1P39059 1388 aa18.39■□□□□ 0.53
RTTN-221ENST00000640736 HEG1Q9ULI3 1381 aa18.38■□□□□ 0.53
RTTN-221ENST00000640736 DLG5Q8TDM6 1919 aa18.37■□□□□ 0.53
RTTN-221ENST00000640736 BTBD11A6QL63 1104 aa18.37■□□□□ 0.53
RTTN-221ENST00000640736 STARD3NLO95772 234 aa18.37■□□□□ 0.53
RTTN-221ENST00000640736 CANXP27824 592 aaKnown RBP18.37■□□□□ 0.53
RTTN-221ENST00000640736 DDR1Q08345 913 aa18.37■□□□□ 0.53
RTTN-221ENST00000640736 MCM10Q7L590 875 aa18.37■□□□□ 0.53
RTTN-221ENST00000640736 RTF1Q92541 710 aaKnown RBP18.37■□□□□ 0.53
RTTN-221ENST00000640736 A0A0G2JLW4 131 aa18.36■□□□□ 0.53
RTTN-221ENST00000640736 KCNQ3O43525 872 aa18.36■□□□□ 0.53
RTTN-221ENST00000640736 TGFB2P61812 414 aa18.36■□□□□ 0.53
RTTN-221ENST00000640736 DDX10Q13206 875 aaKnown RBP18.35■□□□□ 0.53
RTTN-221ENST00000640736 DCTN1Q14203 1278 aa18.35■□□□□ 0.53
RTTN-221ENST00000640736 FMNL2Q96PY5 1086 aa18.35■□□□□ 0.53
RTTN-221ENST00000640736 NARFQ9UHQ1 456 aa18.35■□□□□ 0.53
RTTN-221ENST00000640736 BRCA1P38398 1863 aaKnown RBP18.35■□□□□ 0.53
RTTN-221ENST00000640736 AFDNP55196 1824 aaKnown RBP18.35■□□□□ 0.53
RTTN-221ENST00000640736 NEFMP07197 916 aa18.34■□□□□ 0.53
RTTN-221ENST00000640736 DPEP1P16444 411 aa18.34■□□□□ 0.53
RTTN-221ENST00000640736 TEX13AQ9BXU3 409 aaPredicted RBP18.34■□□□□ 0.53
RTTN-221ENST00000640736 POLRMTO00411 1230 aaKnown RBP18.33■□□□□ 0.52
RTTN-221ENST00000640736 TM4SF1P30408 202 aa18.33■□□□□ 0.52
RTTN-221ENST00000640736 BCS1LQ9Y276 419 aa18.33■□□□□ 0.52
RTTN-221ENST00000640736 ZNF330Q9Y3S2 320 aaPredicted RBP18.33■□□□□ 0.52
RTTN-221ENST00000640736 HTATSF1O43719 755 aaKnown RBP18.31■□□□□ 0.52
RTTN-221ENST00000640736 EIF5P55010 431 aaKnown RBP18.31■□□□□ 0.52
RTTN-221ENST00000640736 NFIXQ14938 502 aa18.31■□□□□ 0.52
RTTN-221ENST00000640736 RALBP1Q15311 655 aa18.31■□□□□ 0.52
RTTN-221ENST00000640736 BCL2L12Q9HB09 334 aa18.31■□□□□ 0.52
RTTN-221ENST00000640736 A0A087WZG4 1122 aa18.3■□□□□ 0.52
RTTN-221ENST00000640736 A1BGP04217 495 aa18.3■□□□□ 0.52
RTTN-221ENST00000640736 SCN7AQ01118 1682 aa18.3■□□□□ 0.52
RTTN-221ENST00000640736 BICDL1Q6ZP65 573 aa18.29■□□□□ 0.52
RTTN-221ENST00000640736 PLEKHF1Q96S99 279 aa18.29■□□□□ 0.52
RTTN-221ENST00000640736 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
RTTN-221ENST00000640736 ATP10DQ9P241 1426 aa18.29■□□□□ 0.52
RTTN-221ENST00000640736 NRXN2Q9P2S2 1712 aa18.29■□□□□ 0.52
RTTN-221ENST00000640736 ARFGEF1Q9Y6D6 1849 aa18.28■□□□□ 0.52
RTTN-221ENST00000640736 MAPK8IP3Q9UPT6 1336 aa18.28■□□□□ 0.52
RTTN-221ENST00000640736 PRAMEF22A3QJZ6 481 aa18.28■□□□□ 0.52
RTTN-221ENST00000640736 CAPN15O75808 1086 aa18.28■□□□□ 0.52
RTTN-221ENST00000640736 MYCNP04198 464 aaPredicted RBP18.28■□□□□ 0.52
RTTN-221ENST00000640736 KCNA3P22001 575 aa18.28■□□□□ 0.52
RTTN-221ENST00000640736 NPM2Q86SE8 214 aaKnown RBP18.28■□□□□ 0.52
RTTN-221ENST00000640736 TBC1D2BQ9UPU7 963 aa18.28■□□□□ 0.52
RTTN-221ENST00000640736 CHRNA5P30532 468 aa18.27■□□□□ 0.52
RTTN-221ENST00000640736 IL6STP40189 918 aaPredicted RBP18.27■□□□□ 0.52
RTTN-221ENST00000640736 PIP4K2AP48426 406 aaPredicted RBP18.27■□□□□ 0.52
RTTN-221ENST00000640736 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.52
RTTN-221ENST00000640736 MIS18AQ9NYP9 233 aa18.27■□□□□ 0.52
RTTN-221ENST00000640736 USP16Q9Y5T5 823 aa18.27■□□□□ 0.52
RTTN-221ENST00000640736 SERPINB2P05120 415 aa18.26■□□□□ 0.51
RTTN-221ENST00000640736 SNRPA1P09661 255 aaKnown RBP18.26■□□□□ 0.51
RTTN-221ENST00000640736 NFE2L2Q16236 605 aa18.26■□□□□ 0.51
RTTN-221ENST00000640736 PNNQ9H307 717 aaKnown RBP18.26■□□□□ 0.51
RTTN-221ENST00000640736 PIM2Q9P1W9 311 aa18.26■□□□□ 0.51
RTTN-221ENST00000640736 BCORQ6W2J9 1755 aa18.26■□□□□ 0.51
RTTN-221ENST00000640736 KDM3BQ7LBC6 1761 aa18.26■□□□□ 0.51
RTTN-221ENST00000640736 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
RTTN-221ENST00000640736 TBC1D9BQ66K14 1250 aa18.25■□□□□ 0.51
RTTN-221ENST00000640736 SAMD1Q6SPF0 538 aaPredicted RBP18.25■□□□□ 0.51
RTTN-221ENST00000640736 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
RTTN-221ENST00000640736 ZNF526Q8TF50 670 aaPredicted RBP18.25■□□□□ 0.51
RTTN-221ENST00000640736 THUMPD2Q9BTF0 503 aaKnown RBP18.25■□□□□ 0.51
RTTN-221ENST00000640736 ADCY9O60503 1353 aa18.25■□□□□ 0.51
RTTN-221ENST00000640736 LAMB4A4D0S4 1761 aa18.25■□□□□ 0.51
RTTN-221ENST00000640736 DALRD3Q5D0E6 543 aaKnown RBP18.24■□□□□ 0.51
RTTN-221ENST00000640736 MYBBP1AQ9BQG0 1328 aaKnown RBP18.23■□□□□ 0.51
RTTN-221ENST00000640736 DLEC1Q9Y238 1755 aa18.23■□□□□ 0.51
RTTN-221ENST00000640736 DZIP3Q86Y13 1208 aaKnown RBP18.23■□□□□ 0.51
RTTN-221ENST00000640736 CARMIL3Q8ND23 1372 aa18.22■□□□□ 0.51
RTTN-221ENST00000640736 CAMTA2O94983 1202 aa18.22■□□□□ 0.51
RTTN-221ENST00000640736 C1QTNF8P60827 252 aa18.22■□□□□ 0.51
RTTN-221ENST00000640736 GPBP1L1Q9HC44 474 aaPredicted RBP18.22■□□□□ 0.51
RTTN-221ENST00000640736 ANKRD31Q8N7Z5 1873 aa18.22■□□□□ 0.51
RTTN-221ENST00000640736 PNISRQ8TF01 805 aaKnown RBP18.21■□□□□ 0.51
RTTN-221ENST00000640736 NBPF26B4DH59 902 aa18.19■□□□□ 0.5
RTTN-221ENST00000640736 RIPK4P57078 832 aa18.19■□□□□ 0.5
RTTN-221ENST00000640736 NBPF10Q6P3W6 841 aaKnown RBP18.19■□□□□ 0.5
RTTN-221ENST00000640736 C2CD5Q86YS7 1000 aa18.19■□□□□ 0.5
RTTN-221ENST00000640736 CCDC24Q8N4L8 307 aa18.19■□□□□ 0.5
RTTN-221ENST00000640736 NBPF15Q8N660 670 aa18.19■□□□□ 0.5
RTTN-221ENST00000640736 SETDB2Q96T68 719 aa18.19■□□□□ 0.5
RTTN-221ENST00000640736 ZBTB22O15209 634 aa18.18■□□□□ 0.5
RTTN-221ENST00000640736 NPHP1O15259 732 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms