RNA–Protein interactions for RNA: ENST00000640646.1

PRICKLE1-218, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 1 (best)

Gene PRICKLE1, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-218ENST00000640646 VSIG10Q8N0Z9 540 aa19.57■□□□□ 0.72
PRICKLE1-218ENST00000640646 FCHSD2O94868 740 aa19.56■□□□□ 0.72
PRICKLE1-218ENST00000640646 BCL2L12Q9HB09 334 aa19.56■□□□□ 0.72
PRICKLE1-218ENST00000640646 PIM2Q9P1W9 311 aa19.55■□□□□ 0.72
PRICKLE1-218ENST00000640646 NARFQ9UHQ1 456 aa19.55■□□□□ 0.72
PRICKLE1-218ENST00000640646 SCN7AQ01118 1682 aa19.55■□□□□ 0.72
PRICKLE1-218ENST00000640646 HSPA6P17066 643 aa19.54■□□□□ 0.72
PRICKLE1-218ENST00000640646 ARHGAP27Q6ZUM4 889 aa19.54■□□□□ 0.72
PRICKLE1-218ENST00000640646 SBF1O95248 1867 aa19.54■□□□□ 0.72
PRICKLE1-218ENST00000640646 ZPR1O75312 459 aa19.53■□□□□ 0.72
PRICKLE1-218ENST00000640646 CHRNA5P30532 468 aa19.53■□□□□ 0.72
PRICKLE1-218ENST00000640646 NFIXQ14938 502 aa19.53■□□□□ 0.72
PRICKLE1-218ENST00000640646 IL17REQ8NFR9 667 aa19.53■□□□□ 0.72
PRICKLE1-218ENST00000640646 CEMIPQ8WUJ3 1361 aa19.53■□□□□ 0.72
PRICKLE1-218ENST00000640646 DALRD3Q5D0E6 543 aaKnown RBP19.51■□□□□ 0.71
PRICKLE1-218ENST00000640646 CARMIL3Q8ND23 1372 aa19.5■□□□□ 0.71
PRICKLE1-218ENST00000640646 HEG1Q9ULI3 1381 aa19.5■□□□□ 0.71
PRICKLE1-218ENST00000640646 GNAT3A8MTJ3 354 aa19.5■□□□□ 0.71
PRICKLE1-218ENST00000640646 U2SURPO15042 1029 aaKnown RBP19.5■□□□□ 0.71
PRICKLE1-218ENST00000640646 EIF5P55010 431 aaKnown RBP19.5■□□□□ 0.71
PRICKLE1-218ENST00000640646 ZNF496Q96IT1 587 aaPredicted RBP19.5■□□□□ 0.71
PRICKLE1-218ENST00000640646 ANKRD31Q8N7Z5 1873 aa19.5■□□□□ 0.71
PRICKLE1-218ENST00000640646 C9orf131Q5VYM1 1079 aa19.49■□□□□ 0.71
PRICKLE1-218ENST00000640646 ZNF790Q6PG37 636 aa19.49■□□□□ 0.71
PRICKLE1-218ENST00000640646 GAS2L2Q8NHY3 880 aa19.49■□□□□ 0.71
PRICKLE1-218ENST00000640646 NMRK2Q9NPI5 230 aa19.49■□□□□ 0.71
PRICKLE1-218ENST00000640646 PHACTR3Q96KR7 559 aa19.48■□□□□ 0.71
PRICKLE1-218ENST00000640646 RSPH6AQ9H0K4 717 aa19.48■□□□□ 0.71
PRICKLE1-218ENST00000640646 SERPINB2P05120 415 aa19.47■□□□□ 0.71
PRICKLE1-218ENST00000640646 CANXP27824 592 aaKnown RBP19.47■□□□□ 0.71
PRICKLE1-218ENST00000640646 CNGB1Q14028 1251 aaPredicted RBP19.47■□□□□ 0.71
PRICKLE1-218ENST00000640646 TTC5Q8N0Z6 440 aa19.47■□□□□ 0.71
PRICKLE1-218ENST00000640646 BCORQ6W2J9 1755 aa19.47■□□□□ 0.71
PRICKLE1-218ENST00000640646 COL11A2P13942 1736 aaPredicted RBP19.46■□□□□ 0.71
PRICKLE1-218ENST00000640646 TOMM70O94826 608 aa19.46■□□□□ 0.71
PRICKLE1-218ENST00000640646 TNRC6CQ9HCJ0 1690 aaKnown RBP19.46■□□□□ 0.71
PRICKLE1-218ENST00000640646 STARD3NLO95772 234 aa19.45■□□□□ 0.7
PRICKLE1-218ENST00000640646 PRKAR2BP31323 418 aa19.45■□□□□ 0.7
PRICKLE1-218ENST00000640646 TEFQ10587 303 aa19.45■□□□□ 0.7
PRICKLE1-218ENST00000640646 PRELPP51888 382 aa19.44■□□□□ 0.7
PRICKLE1-218ENST00000640646 KCNQ3O43525 872 aa19.43■□□□□ 0.7
PRICKLE1-218ENST00000640646 RNF181Q9P0P0 153 aa19.43■□□□□ 0.7
PRICKLE1-218ENST00000640646 TIAM2Q8IVF5 1701 aa19.42■□□□□ 0.7
PRICKLE1-218ENST00000640646 A0A087WZG4 1122 aa19.42■□□□□ 0.7
PRICKLE1-218ENST00000640646 IL6STP40189 918 aaPredicted RBP19.42■□□□□ 0.7
PRICKLE1-218ENST00000640646 TBC1D9BQ66K14 1250 aa19.42■□□□□ 0.7
PRICKLE1-218ENST00000640646 TEX13AQ9BXU3 409 aaPredicted RBP19.42■□□□□ 0.7
PRICKLE1-218ENST00000640646 WDR90Q96KV7 1748 aa19.42■□□□□ 0.7
PRICKLE1-218ENST00000640646 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
PRICKLE1-218ENST00000640646 RASSF7Q02833 373 aa19.41■□□□□ 0.7
PRICKLE1-218ENST00000640646 FMNL2Q96PY5 1086 aa19.41■□□□□ 0.7
PRICKLE1-218ENST00000640646 CFAP53Q96M91 514 aa19.4■□□□□ 0.7
PRICKLE1-218ENST00000640646 CCDC88AQ3V6T2 1871 aa19.39■□□□□ 0.7
PRICKLE1-218ENST00000640646 A1BGP04217 495 aa19.39■□□□□ 0.69
PRICKLE1-218ENST00000640646 BICDL1Q6ZP65 573 aa19.39■□□□□ 0.69
PRICKLE1-218ENST00000640646 C2CD5Q86YS7 1000 aa19.39■□□□□ 0.69
PRICKLE1-218ENST00000640646 RBM46Q8TBY0 533 aaKnown RBP19.39■□□□□ 0.69
PRICKLE1-218ENST00000640646 TBC1D2BQ9UPU7 963 aa19.39■□□□□ 0.69
PRICKLE1-218ENST00000640646 ZC3H4Q9UPT8 1303 aaKnown RBP19.39■□□□□ 0.69
PRICKLE1-218ENST00000640646 FER1L6Q2WGJ9 1857 aa19.39■□□□□ 0.69
PRICKLE1-218ENST00000640646 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
PRICKLE1-218ENST00000640646 CAMTA2O94983 1202 aa19.38■□□□□ 0.69
PRICKLE1-218ENST00000640646 APLP1P51693 650 aa19.38■□□□□ 0.69
PRICKLE1-218ENST00000640646 PRR5LQ6MZQ0 368 aa19.38■□□□□ 0.69
PRICKLE1-218ENST00000640646 DNAJC5GQ8N7S2 189 aa19.38■□□□□ 0.69
PRICKLE1-218ENST00000640646 TTLL6Q8N841 843 aa19.38■□□□□ 0.69
PRICKLE1-218ENST00000640646 KDM2BQ8NHM5 1336 aa19.38■□□□□ 0.69
PRICKLE1-218ENST00000640646 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
PRICKLE1-218ENST00000640646 PRAMEF22A3QJZ6 481 aa19.37■□□□□ 0.69
PRICKLE1-218ENST00000640646 NFKBIEO00221 500 aa19.37■□□□□ 0.69
PRICKLE1-218ENST00000640646 USP16Q9Y5T5 823 aa19.37■□□□□ 0.69
PRICKLE1-218ENST00000640646 H0YIN7 160 aa19.36■□□□□ 0.69
PRICKLE1-218ENST00000640646 LMNB1P20700 586 aa19.36■□□□□ 0.69
PRICKLE1-218ENST00000640646 NUDCQ9Y266 331 aa19.36■□□□□ 0.69
PRICKLE1-218ENST00000640646 LAMB4A4D0S4 1761 aa19.35■□□□□ 0.69
PRICKLE1-218ENST00000640646 U2AF1L5P0DN76 240 aaPredicted RBP19.35■□□□□ 0.69
PRICKLE1-218ENST00000640646 U2AF1Q01081 240 aaKnown RBP eCLIP19.35■□□□□ 0.69
PRICKLE1-218ENST00000640646 MCM10Q7L590 875 aa19.35■□□□□ 0.69
PRICKLE1-218ENST00000640646 BRIP1Q9BX63 1249 aa19.35■□□□□ 0.69
PRICKLE1-218ENST00000640646 DLG5Q8TDM6 1919 aa19.35■□□□□ 0.69
PRICKLE1-218ENST00000640646 DICER1Q9UPY3 1922 aaKnown RBP19.35■□□□□ 0.69
PRICKLE1-218ENST00000640646 CCDC24Q8N4L8 307 aa19.34■□□□□ 0.69
PRICKLE1-218ENST00000640646 RRAGCQ9HB90 399 aa19.34■□□□□ 0.69
PRICKLE1-218ENST00000640646 ZNF330Q9Y3S2 320 aaPredicted RBP19.34■□□□□ 0.69
PRICKLE1-218ENST00000640646 KDM3BQ7LBC6 1761 aa19.34■□□□□ 0.69
PRICKLE1-218ENST00000640646 CACNA1SQ13698 1873 aa19.33■□□□□ 0.69
PRICKLE1-218ENST00000640646 PIP4K2AP48426 406 aaPredicted RBP19.33■□□□□ 0.68
PRICKLE1-218ENST00000640646 FSTL1Q12841 308 aa19.33■□□□□ 0.68
PRICKLE1-218ENST00000640646 IFFO2Q5TF58 517 aa19.33■□□□□ 0.68
PRICKLE1-218ENST00000640646 PDZRN3Q9UPQ7 1066 aa19.33■□□□□ 0.68
PRICKLE1-218ENST00000640646 SLX4Q8IY92 1834 aa19.32■□□□□ 0.68
PRICKLE1-218ENST00000640646 HTATSF1O43719 755 aaKnown RBP19.32■□□□□ 0.68
PRICKLE1-218ENST00000640646 PDE6BP35913 854 aa19.32■□□□□ 0.68
PRICKLE1-218ENST00000640646 DCTN1Q14203 1278 aa19.32■□□□□ 0.68
PRICKLE1-218ENST00000640646 DZIP3Q86Y13 1208 aaKnown RBP19.32■□□□□ 0.68
PRICKLE1-218ENST00000640646 GLTPD2A6NH11 291 aa19.31■□□□□ 0.68
PRICKLE1-218ENST00000640646 NBPF26B4DH59 902 aa19.31■□□□□ 0.68
PRICKLE1-218ENST00000640646 SNRPA1P09661 255 aaKnown RBP19.31■□□□□ 0.68
PRICKLE1-218ENST00000640646 NBPF10Q6P3W6 841 aaKnown RBP19.31■□□□□ 0.68
PRICKLE1-218ENST00000640646 NBPF15Q8N660 670 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms