RNA–Protein interactions for RNA: ENST00000640511.1

SPIN3-241, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-241ENST00000640511 EXOC4Q96A65 974 aa13.9□□□□□ -0.18
SPIN3-241ENST00000640511 EIF3CLB5ME19 914 aaKnown RBP13.9□□□□□ -0.18
SPIN3-241ENST00000640511 ATP8B1O43520 1251 aa13.9□□□□□ -0.18
SPIN3-241ENST00000640511 NYAP1Q6ZVC0 841 aa13.9□□□□□ -0.18
SPIN3-241ENST00000640511 FILIP1Q7Z7B0 1213 aa13.9□□□□□ -0.18
SPIN3-241ENST00000640511 TMEM87AQ8NBN3 555 aa13.9□□□□□ -0.18
SPIN3-241ENST00000640511 EIF3CQ99613 913 aaKnown RBP13.9□□□□□ -0.18
SPIN3-241ENST00000640511 ASXL1Q8IXJ9 1541 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 ABCA9Q8IUA7 1624 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 CT47B1P0C2W7 299 aaPredicted RBP13.89□□□□□ -0.19
SPIN3-241ENST00000640511 INTS3Q68E01 1043 aaKnown RBP13.89□□□□□ -0.19
SPIN3-241ENST00000640511 ZNF526Q8TF50 670 aaPredicted RBP13.89□□□□□ -0.19
SPIN3-241ENST00000640511 ANKRD50Q9ULJ7 1429 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 CROCC2H7BZ55 1655 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 FANCAO15360 1455 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 KIF2AO00139 706 aaPredicted RBP13.89□□□□□ -0.19
SPIN3-241ENST00000640511 MCM2P49736 904 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 ARHGAP29Q52LW3 1261 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 NBPF6Q5VWK0 638 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 NBPF5PQ86XG9 351 aaPredicted RBP13.89□□□□□ -0.19
SPIN3-241ENST00000640511 FAM200AQ8TCP9 573 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 RUNDC1Q96C34 613 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 BORCS6Q96GS4 357 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 NBPF4Q96M43 638 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 TERF2IPQ9NYB0 399 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 TRPM1Q7Z4N2 1603 aa13.89□□□□□ -0.19
SPIN3-241ENST00000640511 KANK1Q14678 1352 aa13.88□□□□□ -0.19
SPIN3-241ENST00000640511 KIF3CO14782 793 aa13.88□□□□□ -0.19
SPIN3-241ENST00000640511 TCP11L2Q8N4U5 519 aa13.88□□□□□ -0.19
SPIN3-241ENST00000640511 CACTINQ8WUQ7 758 aaKnown RBP13.88□□□□□ -0.19
SPIN3-241ENST00000640511 CD109Q6YHK3 1445 aa13.88□□□□□ -0.19
SPIN3-241ENST00000640511 WDR33Q9C0J8 1336 aaKnown RBP13.88□□□□□ -0.19
SPIN3-241ENST00000640511 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
SPIN3-241ENST00000640511 MPHOSPH10O00566 681 aaKnown RBP13.88□□□□□ -0.19
SPIN3-241ENST00000640511 ZKSCAN8Q15776 578 aaPredicted RBP13.88□□□□□ -0.19
SPIN3-241ENST00000640511 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.88□□□□□ -0.19
SPIN3-241ENST00000640511 REXO1L1PQ8IX06 675 aa13.88□□□□□ -0.19
SPIN3-241ENST00000640511 UBXN6Q9BZV1 441 aa13.88□□□□□ -0.19
SPIN3-241ENST00000640511 TRIM5Q9C035 493 aa13.88□□□□□ -0.19
SPIN3-241ENST00000640511 ELP1O95163 1332 aa13.88□□□□□ -0.19
SPIN3-241ENST00000640511 C11orf91Q3C1V1 193 aa13.88□□□□□ -0.19
SPIN3-241ENST00000640511 INTS4Q96HW7 963 aaKnown RBP13.88□□□□□ -0.19
SPIN3-241ENST00000640511 PHF23Q9BUL5 403 aaPredicted RBP13.88□□□□□ -0.19
SPIN3-241ENST00000640511 KLHL33A6NCF5 533 aa13.87□□□□□ -0.19
SPIN3-241ENST00000640511 H0YHG0 523 aa13.87□□□□□ -0.19
SPIN3-241ENST00000640511 SARNPP82979 210 aaKnown RBP13.87□□□□□ -0.19
SPIN3-241ENST00000640511 SMC1AQ14683 1233 aaKnown RBP13.87□□□□□ -0.19
SPIN3-241ENST00000640511 NEK4P51957 841 aa13.87□□□□□ -0.19
SPIN3-241ENST00000640511 CASC1Q6TDU7 716 aa13.87□□□□□ -0.19
SPIN3-241ENST00000640511 BSDC1Q9NW68 430 aaPredicted RBP13.87□□□□□ -0.19
SPIN3-241ENST00000640511 ADAM21Q9UKJ8 722 aa13.87□□□□□ -0.19
SPIN3-241ENST00000640511 NUP155O75694 1391 aa13.87□□□□□ -0.19
SPIN3-241ENST00000640511 CASTP20810 708 aaKnown RBP13.86□□□□□ -0.19
SPIN3-241ENST00000640511 FAM69CQ0P6D2 419 aa13.86□□□□□ -0.19
SPIN3-241ENST00000640511 SPAG9O60271 1321 aaKnown RBP13.86□□□□□ -0.19
SPIN3-241ENST00000640511 USP27XA6NNY8 438 aa13.86□□□□□ -0.19
SPIN3-241ENST00000640511 GSPT1P15170 499 aaKnown RBP13.86□□□□□ -0.19
SPIN3-241ENST00000640511 CUL4AQ13619 759 aa13.86□□□□□ -0.19
SPIN3-241ENST00000640511 NOB1Q9ULX3 412 aaKnown RBP13.86□□□□□ -0.19
SPIN3-241ENST00000640511 SYNMO15061 1565 aa13.86□□□□□ -0.19
SPIN3-241ENST00000640511 SCP2P22307 547 aa13.86□□□□□ -0.19
SPIN3-241ENST00000640511 ARHGEF5Q12774 1597 aa13.86□□□□□ -0.19
SPIN3-241ENST00000640511 NEMFO60524 1076 aa13.85□□□□□ -0.19
SPIN3-241ENST00000640511 TTLL5Q6EMB2 1281 aa13.85□□□□□ -0.19
SPIN3-241ENST00000640511 AFAP1Q8N556 730 aa13.85□□□□□ -0.19
SPIN3-241ENST00000640511 DNAAF4Q8WXU2 420 aa13.85□□□□□ -0.19
SPIN3-241ENST00000640511 PRDM15P57071 1507 aaPredicted RBP13.85□□□□□ -0.19
SPIN3-241ENST00000640511 ZNF75DP51815 510 aa13.85□□□□□ -0.19
SPIN3-241ENST00000640511 CORO7P57737 925 aa13.85□□□□□ -0.19
SPIN3-241ENST00000640511 ZRSR1Q15695 479 aaKnown RBP13.85□□□□□ -0.19
SPIN3-241ENST00000640511 UBXN4Q92575 508 aa13.85□□□□□ -0.19
SPIN3-241ENST00000640511 L2HGDHQ9H9P8 463 aa13.85□□□□□ -0.19
SPIN3-241ENST00000640511 CLIP2Q9UDT6 1046 aa13.85□□□□□ -0.19
SPIN3-241ENST00000640511 CNPY2Q9Y2B0 182 aa13.85□□□□□ -0.19
SPIN3-241ENST00000640511 IPO8O15397 1037 aaKnown RBP13.84□□□□□ -0.19
SPIN3-241ENST00000640511 ARID4AP29374 1257 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-241ENST00000640511 CCDC27Q2M243 656 aa13.84□□□□□ -0.19
SPIN3-241ENST00000640511 SSH1Q8WYL5 1049 aa13.84□□□□□ -0.19
SPIN3-241ENST00000640511 LUZP1Q86V48 1076 aa13.84□□□□□ -0.19
SPIN3-241ENST00000640511 PLA2G4DQ86XP0 818 aa13.84□□□□□ -0.19
SPIN3-241ENST00000640511 LRRC8AQ8IWT6 810 aa13.84□□□□□ -0.19
SPIN3-241ENST00000640511 TBC1D22AQ8WUA7 517 aa13.84□□□□□ -0.19
SPIN3-241ENST00000640511 ADGRL1O94910 1474 aa13.84□□□□□ -0.19
SPIN3-241ENST00000640511 ATP10AO60312 1499 aa13.84□□□□□ -0.19
SPIN3-241ENST00000640511 OTUD6BQ8N6M0 293 aa13.84□□□□□ -0.19
SPIN3-241ENST00000640511 ITFG2Q969R8 447 aa13.84□□□□□ -0.19
SPIN3-241ENST00000640511 ZSCAN16Q9H4T2 348 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-241ENST00000640511 TRMT1Q9NXH9 659 aaKnown RBP13.84□□□□□ -0.19
SPIN3-241ENST00000640511 REREQ9P2R6 1566 aa13.83□□□□□ -0.2
SPIN3-241ENST00000640511 ABCC1P33527 1531 aa13.83□□□□□ -0.2
SPIN3-241ENST00000640511 SHANK2Q9UPX8 1470 aa13.83□□□□□ -0.2
SPIN3-241ENST00000640511 CPP00450 1065 aa13.83□□□□□ -0.2
SPIN3-241ENST00000640511 TRAPPC8Q9Y2L5 1435 aa13.83□□□□□ -0.2
SPIN3-241ENST00000640511 LIG1P18858 919 aa13.83□□□□□ -0.2
SPIN3-241ENST00000640511 MNAT1P51948 309 aa13.83□□□□□ -0.2
SPIN3-241ENST00000640511 TTC19Q6DKK2 380 aaPredicted RBP13.83□□□□□ -0.2
SPIN3-241ENST00000640511 SKILP12757 684 aa13.82□□□□□ -0.2
SPIN3-241ENST00000640511 EFCAB13Q8IY85 973 aa13.82□□□□□ -0.2
SPIN3-241ENST00000640511 SRCIN1Q9C0H9 1055 aa13.82□□□□□ -0.2
SPIN3-241ENST00000640511 PDRG1Q9NUG6 133 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms