RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 NLGN1Q8N2Q7 840 aa6.94□□□□□ -1.3
RTTN-218ENST00000640408 C9orf78Q9NZ63 289 aaPredicted RBP6.94□□□□□ -1.3
RTTN-218ENST00000640408 PLSCR1O15162 318 aa6.94□□□□□ -1.3
RTTN-218ENST00000640408 TRIM37O94972 964 aa6.94□□□□□ -1.3
RTTN-218ENST00000640408 DDX21Q9NR30 783 aaKnown RBP eCLIP6.94□□□□□ -1.3
RTTN-218ENST00000640408 CCDC87Q9NVE4 849 aa6.94□□□□□ -1.3
RTTN-218ENST00000640408 CCT4P50991 539 aaKnown RBP6.94□□□□□ -1.3
RTTN-218ENST00000640408 GZF1Q9H116 711 aaPredicted RBP6.94□□□□□ -1.3
RTTN-218ENST00000640408 BRPF3Q9ULD4 1205 aa6.94□□□□□ -1.3
RTTN-218ENST00000640408 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
RTTN-218ENST00000640408 EXOSC9Q06265 439 aaKnown RBP6.93□□□□□ -1.3
RTTN-218ENST00000640408 PPP1R42Q7Z4L9 355 aa6.93□□□□□ -1.3
RTTN-218ENST00000640408 PARP10Q53GL7 1025 aa6.93□□□□□ -1.3
RTTN-218ENST00000640408 PPP1R1BQ9UD71 204 aaPredicted RBP6.93□□□□□ -1.3
RTTN-218ENST00000640408 COL14A1Q05707 1796 aaKnown RBP6.93□□□□□ -1.3
RTTN-218ENST00000640408 ATRNO75882 1429 aa6.93□□□□□ -1.3
RTTN-218ENST00000640408 SLFN5Q08AF3 891 aa6.93□□□□□ -1.3
RTTN-218ENST00000640408 MARCH10Q8NA82 808 aaPredicted RBP6.93□□□□□ -1.3
RTTN-218ENST00000640408 NYXQ9GZU5 481 aa6.93□□□□□ -1.3
RTTN-218ENST00000640408 TSPYL1Q9H0U9 437 aa6.93□□□□□ -1.3
RTTN-218ENST00000640408 SKOR2Q2VWA4 1001 aaPredicted RBP6.93□□□□□ -1.3
RTTN-218ENST00000640408 TEX35Q5T0J7 233 aa6.93□□□□□ -1.3
RTTN-218ENST00000640408 RC3H1Q5TC82 1133 aaKnown RBP6.93□□□□□ -1.3
RTTN-218ENST00000640408 HSP90AB4PQ58FF6 505 aa6.93□□□□□ -1.3
RTTN-218ENST00000640408 RGL2O15211 777 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 IL6STP40189 918 aaPredicted RBP6.92□□□□□ -1.3
RTTN-218ENST00000640408 PTPRCP08575 1304 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 NHSL1Q5SYE7 1610 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 ZRSR1Q15695 479 aaKnown RBP6.92□□□□□ -1.3
RTTN-218ENST00000640408 IL17REQ8NFR9 667 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 PALLDQ8WX93 1383 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 PLCB2Q00722 1185 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 SYAP1Q96A49 352 aaPredicted RBP6.92□□□□□ -1.3
RTTN-218ENST00000640408 SRCIN1Q9C0H9 1055 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 DDX19BQ9UMR2 479 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 SLC4A2P04920 1241 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 DCTN1Q14203 1278 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 CASC1Q6TDU7 716 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 ARHGAP45Q92619 1136 aa6.92□□□□□ -1.3
RTTN-218ENST00000640408 MON2Q7Z3U7 1717 aa6.91□□□□□ -1.3
RTTN-218ENST00000640408 SLC4A10Q6U841 1118 aa6.91□□□□□ -1.3
RTTN-218ENST00000640408 TPTE2Q6XPS3 522 aa6.91□□□□□ -1.3
RTTN-218ENST00000640408 TXNRD1Q16881 649 aa6.91□□□□□ -1.3
RTTN-218ENST00000640408 ZNF496Q96IT1 587 aaPredicted RBP6.91□□□□□ -1.3
RTTN-218ENST00000640408 CAMTA1Q9Y6Y1 1673 aa6.91□□□□□ -1.3
RTTN-218ENST00000640408 COL16A1Q07092 1604 aaPredicted RBP6.91□□□□□ -1.3
RTTN-218ENST00000640408 GNPATO15228 680 aa6.91□□□□□ -1.3
RTTN-218ENST00000640408 OS9Q13438 667 aaPredicted RBP6.91□□□□□ -1.3
RTTN-218ENST00000640408 TOPAZ1Q8N9V7 1692 aa6.91□□□□□ -1.3
RTTN-218ENST00000640408 PIGBQ92521 554 aa6.91□□□□□ -1.3
RTTN-218ENST00000640408 SETDB2Q96T68 719 aa6.91□□□□□ -1.3
RTTN-218ENST00000640408 PDCL3Q9H2J4 239 aa6.91□□□□□ -1.3
RTTN-218ENST00000640408 RPS6KA4O75676 772 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 RGS3P49796 1198 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 PDE3AQ14432 1141 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 POTEAQ6S8J7 498 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 DZIP1LQ8IYY4 767 aaKnown RBP6.9□□□□□ -1.3
RTTN-218ENST00000640408 PLEKHF1Q96S99 279 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 THUMPD2Q9BTF0 503 aaKnown RBP6.9□□□□□ -1.3
RTTN-218ENST00000640408 LGR6Q9HBX8 967 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 MBIPQ9NS73 344 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 PARP3Q9Y6F1 533 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 ALDH1L1O75891 902 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 RBM10P98175 930 aaKnown RBP6.9□□□□□ -1.3
RTTN-218ENST00000640408 AIMP1Q12904 312 aaKnown RBP6.9□□□□□ -1.3
RTTN-218ENST00000640408 ANKRD13DQ6ZTN6 518 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 DNAJC10Q8IXB1 793 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 NFAT5O94916 1531 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 ST5P78524 1137 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 SLC39A6Q13433 755 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 BBXQ8WY36 941 aaPredicted RBP6.9□□□□□ -1.3
RTTN-218ENST00000640408 CWC15Q9P013 229 aaKnown RBP6.9□□□□□ -1.3
RTTN-218ENST00000640408 BCL9LQ86UU0 1499 aa6.9□□□□□ -1.3
RTTN-218ENST00000640408 EIF4A1P60842 406 aaKnown RBP6.9□□□□□ -1.31
RTTN-218ENST00000640408 CLEC4GQ6UXB4 293 aa6.9□□□□□ -1.31
RTTN-218ENST00000640408 DRC7Q8IY82 874 aa6.9□□□□□ -1.31
RTTN-218ENST00000640408 HEG1Q9ULI3 1381 aa6.9□□□□□ -1.31
RTTN-218ENST00000640408 G3V3G9 751 aa6.9□□□□□ -1.31
RTTN-218ENST00000640408 SSFA2P28290 1259 aa6.9□□□□□ -1.31
RTTN-218ENST00000640408 DCAF8Q5TAQ9 597 aa6.9□□□□□ -1.31
RTTN-218ENST00000640408 GIGYF1O75420 1035 aaPredicted RBP6.89□□□□□ -1.31
RTTN-218ENST00000640408 DZIP3Q86Y13 1208 aaKnown RBP6.89□□□□□ -1.31
RTTN-218ENST00000640408 AKAP12Q02952 1782 aa6.89□□□□□ -1.31
RTTN-218ENST00000640408 GPS2Q13227 327 aa6.89□□□□□ -1.31
RTTN-218ENST00000640408 MRE11P49959 708 aa6.89□□□□□ -1.31
RTTN-218ENST00000640408 DNAAF4Q8WXU2 420 aa6.89□□□□□ -1.31
RTTN-218ENST00000640408 UBTFL1P0CB47 393 aaPredicted RBP6.89□□□□□ -1.31
RTTN-218ENST00000640408 CCDC184Q52MB2 194 aa6.89□□□□□ -1.31
RTTN-218ENST00000640408 KSR2Q6VAB6 950 aa6.89□□□□□ -1.31
RTTN-218ENST00000640408 LINS1Q8NG48 757 aa6.89□□□□□ -1.31
RTTN-218ENST00000640408 TSR2Q969E8 191 aaKnown RBP6.89□□□□□ -1.31
RTTN-218ENST00000640408 STRCP1A6NGW2 1772 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 ERVV-1B6SEH8 477 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 MYL6BP14649 208 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 ITPRIPQ8IWB1 547 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 RWDD1Q9H446 243 aaPredicted RBP6.88□□□□□ -1.31
RTTN-218ENST00000640408 FLIIQ13045 1269 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 RNF123Q5XPI4 1314 aa6.88□□□□□ -1.31
RTTN-218ENST00000640408 PATL2C9JE40 543 aaKnown RBP6.88□□□□□ -1.31
RTTN-218ENST00000640408 NBPF5PQ86XG9 351 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms