RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, human

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNQ3-208	ENST00000639496	ACE	P12821	1306 aa		12.02	□□□□□ -0.49
KCNQ3-208	ENST00000639496	ZRSR2	Q15696	482 aa	Known RBP	12.02	□□□□□ -0.49
KCNQ3-208	ENST00000639496	FLII	Q13045	1269 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	NFKBIB	Q15653	356 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	TEX14	Q8IWB6	1497 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	TTC21A	Q8NDW8	1320 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	KIF20A	O95235	890 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	CHMP4BP1	P59074	171 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	ZCRB1	Q8TBF4	217 aa	Known RBP	12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	SSH1	Q8WYL5	1049 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	FAM135A	Q9P2D6	1515 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	PTPRC	P08575	1304 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	TMEM266	Q2M3C6	531 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	NBPF14	Q5TI25	921 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	CAMSAP2	Q08AD1	1489 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	TRAF1	Q13077	416 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	CCDC181	Q5TID7	509 aa		12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.01	□□□□□ -0.49
KCNQ3-208	ENST00000639496	KIF14	Q15058	1648 aa		12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	CAST	P20810	708 aa	Known RBP	12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	MPHOSPH6	Q99547	160 aa	Known RBP	12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	DDB1	Q16531	1140 aa		12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	SEPT11	Q9NVA2	429 aa	Known RBP	12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	CIZ1	Q9ULV3	898 aa	Predicted RBP	12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	NCOA1	Q15788	1441 aa		12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	CCDC152	Q4G0S7	254 aa		12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	OGFOD1	Q8N543	542 aa		12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	SLC12A7	Q9Y666	1083 aa		12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	CCDC194	A0A1B0GVG4	234 aa		12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	EIF5	P55010	431 aa	Known RBP	12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	PDE4B	Q07343	736 aa		12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	CATIP	Q7Z7H3	387 aa		12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	HDAC9	Q9UKV0	1011 aa		12	□□□□□ -0.49
KCNQ3-208	ENST00000639496	KIF5B	P33176	963 aa		11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	NLRP3	Q96P20	1036 aa		11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	SETDB2	Q96T68	719 aa		11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	SMTNL1	A8MU46	457 aa		11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	UQCRFS1P1	P0C7P4	283 aa		11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	HMGN5	P82970	282 aa	Known RBP	11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	PPP4R3B	Q5MIZ7	849 aa		11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	DDX11	Q96FC9	970 aa		11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	IFIT3	O14879	490 aa	Known RBP	11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	MYCN	P04198	464 aa	Predicted RBP	11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	POLD1	P28340	1107 aa		11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	GSTO1	P78417	241 aa		11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	UBE3B	Q7Z3V4	1068 aa		11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	LRRFIP2	Q9Y608	721 aa	Known RBP	11.99	□□□□□ -0.49
KCNQ3-208	ENST00000639496	ANKRD13D	Q6ZTN6	518 aa		11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	C19orf44	Q9H6X5	657 aa		11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	ECHDC1	Q9NTX5	307 aa		11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	UHRF1BP1L	A0JNW5	1464 aa		11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	ABCC5	O15440	1437 aa		11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	NOS1	P29475	1434 aa		11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496		F6X3S4	739 aa		11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	SEPT7	Q16181	437 aa	Known RBP	11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	PRPF40B	Q6NWY9	871 aa	Known RBP	11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	C8orf37	Q96NL8	207 aa		11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	NUP62CL	Q9H1M0	184 aa		11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	BAG4	O95429	457 aa	Known RBP	11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	UPF3B	Q9BZI7	483 aa	Known RBP	11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	ZGPAT	Q8N5A5	531 aa	Known RBP	11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	C8orf76	Q96K31	380 aa		11.98	□□□□□ -0.49
KCNQ3-208	ENST00000639496	MAP3K2	Q9Y2U5	619 aa		11.97	□□□□□ -0.49
KCNQ3-208	ENST00000639496	FGFR1OP	O95684	399 aa	Known RBP	11.97	□□□□□ -0.49
KCNQ3-208	ENST00000639496	RARS	P54136	660 aa	Known RBP	11.97	□□□□□ -0.49
KCNQ3-208	ENST00000639496	TSG101	Q99816	390 aa		11.97	□□□□□ -0.49
KCNQ3-208	ENST00000639496	PIK3R4	Q99570	1358 aa		11.97	□□□□□ -0.49
KCNQ3-208	ENST00000639496	GOLGA6L10	A6NI86	522 aa		11.97	□□□□□ -0.49
KCNQ3-208	ENST00000639496	LRRC59	Q96AG4	307 aa	Known RBP	11.97	□□□□□ -0.49
KCNQ3-208	ENST00000639496	TSPY2	A6NKD2	308 aa		11.96	□□□□□ -0.49
KCNQ3-208	ENST00000639496	ATP5J2-PTCD1	G3V325	749 aa		11.96	□□□□□ -0.49
KCNQ3-208	ENST00000639496	ZNF397	Q8NF99	534 aa	Predicted RBP	11.96	□□□□□ -0.49
KCNQ3-208	ENST00000639496	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.96	□□□□□ -0.49
KCNQ3-208	ENST00000639496	PI4KAP2	A4QPH2	592 aa		11.96	□□□□□ -0.49
KCNQ3-208	ENST00000639496	VPS36	Q86VN1	386 aa		11.96	□□□□□ -0.49
KCNQ3-208	ENST00000639496	PI4KAP1	Q8N8J0	262 aa		11.96	□□□□□ -0.49
KCNQ3-208	ENST00000639496	EVI5L	Q96CN4	794 aa		11.96	□□□□□ -0.49
KCNQ3-208	ENST00000639496	SCAF11	Q99590	1463 aa	Known RBP	11.96	□□□□□ -0.5
KCNQ3-208	ENST00000639496	NF2	P35240	595 aa		11.96	□□□□□ -0.5
KCNQ3-208	ENST00000639496	ATP6V1A	P38606	617 aa		11.96	□□□□□ -0.5
KCNQ3-208	ENST00000639496	NLRP5	P59047	1200 aa		11.96	□□□□□ -0.5
KCNQ3-208	ENST00000639496	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.96	□□□□□ -0.5
KCNQ3-208	ENST00000639496	CCDC150	Q8NCX0	1101 aa		11.96	□□□□□ -0.5
KCNQ3-208	ENST00000639496	TAF4B	Q92750	862 aa		11.96	□□□□□ -0.5
KCNQ3-208	ENST00000639496	GOLGA8A	A7E2F4	631 aa		11.95	□□□□□ -0.5
KCNQ3-208	ENST00000639496	GOLGA8B	A8MQT2	603 aa		11.95	□□□□□ -0.5
KCNQ3-208	ENST00000639496	IQCE	Q6IPM2	695 aa		11.95	□□□□□ -0.5
KCNQ3-208	ENST00000639496	CETN1	Q12798	172 aa		11.95	□□□□□ -0.5
KCNQ3-208	ENST00000639496	SSR1	P43307	286 aa	Known RBP	11.95	□□□□□ -0.5
KCNQ3-208	ENST00000639496	CCDC191	Q8NCU4	936 aa		11.95	□□□□□ -0.5
KCNQ3-208	ENST00000639496	CCDC178	Q5BJE1	867 aa		11.94	□□□□□ -0.5
KCNQ3-208	ENST00000639496	TPTE2	Q6XPS3	522 aa		11.94	□□□□□ -0.5
KCNQ3-208	ENST00000639496	CCDC82	Q8N4S0	544 aa		11.94	□□□□□ -0.5
KCNQ3-208	ENST00000639496	SSRP1	Q08945	709 aa	Known RBP	11.94	□□□□□ -0.5
KCNQ3-208	ENST00000639496	FKBP15	Q5T1M5	1219 aa		11.94	□□□□□ -0.5
KCNQ3-208	ENST00000639496	JAKMIP3	Q5VZ66	844 aa		11.94	□□□□□ -0.5
KCNQ3-208	ENST00000639496	NYX	Q9GZU5	481 aa		11.94	□□□□□ -0.5

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