RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	ZNF397	Q8NF99	534 aa	Predicted RBP	12.94	□□□□□ -0.34
PAX6-256	ENST00000639394	FRMD4B	Q9Y2L6	1034 aa		12.94	□□□□□ -0.34
PAX6-256	ENST00000639394	EFCAB13	Q8IY85	973 aa		12.94	□□□□□ -0.34
PAX6-256	ENST00000639394	TSC1	Q92574	1164 aa		12.94	□□□□□ -0.34
PAX6-256	ENST00000639394	ZNF428	Q96B54	188 aa		12.94	□□□□□ -0.34
PAX6-256	ENST00000639394	SYNRG	Q9UMZ2	1314 aa		12.93	□□□□□ -0.34
PAX6-256	ENST00000639394	NOS1	P29475	1434 aa		12.93	□□□□□ -0.34
PAX6-256	ENST00000639394	SGSM2	O43147	1006 aa		12.93	□□□□□ -0.34
PAX6-256	ENST00000639394	SLFNL1	Q499Z3	407 aa		12.93	□□□□□ -0.34
PAX6-256	ENST00000639394	DZIP3	Q86Y13	1208 aa	Known RBP	12.93	□□□□□ -0.34
PAX6-256	ENST00000639394	SUN2	Q9UH99	717 aa		12.93	□□□□□ -0.34
PAX6-256	ENST00000639394	SPATA31E1	Q6ZUB1	1445 aa		12.93	□□□□□ -0.34
PAX6-256	ENST00000639394	TPM4	P67936	248 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	TRIM74	Q86UV6	250 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	TRIM73	Q86UV7	250 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	GOLGA5	Q8TBA6	731 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	CLTC	Q00610	1675 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	IVL	P07476	585 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	PEX19	P40855	299 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	NCBP1	Q09161	790 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	MCM6	Q14566	821 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	BMS1	Q14692	1282 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	RNF20	Q5VTR2	975 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	CLEC17A	Q6ZS10	378 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	KCTD17	Q8N5Z5	321 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	ATL2	Q8NHH9	583 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	MMTAG2	Q9BU76	263 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	UBA5	Q9GZZ9	404 aa		12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	RRP15	Q9Y3B9	282 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-256	ENST00000639394	UGGT1	Q9NYU2	1555 aa		12.91	□□□□□ -0.34
PAX6-256	ENST00000639394	NAP1L1	P55209	391 aa	Known RBP	12.91	□□□□□ -0.34
PAX6-256	ENST00000639394	CCDC26	Q8TAB7	109 aa		12.91	□□□□□ -0.34
PAX6-256	ENST00000639394	ZNF396	Q96N95	335 aa	Predicted RBP	12.91	□□□□□ -0.34
PAX6-256	ENST00000639394	A1CF	Q9NQ94	594 aa	Known RBP	12.91	□□□□□ -0.34
PAX6-256	ENST00000639394	NEURL4	Q96JN8	1562 aa		12.91	□□□□□ -0.34
PAX6-256	ENST00000639394	RIOK3	O14730	519 aa	Known RBP	12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	RBBP5	Q15291	538 aa	Known RBP	12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	RPUSD2	Q8IZ73	545 aa	Known RBP	12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	FBXO18	Q8NFZ0	1043 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	MIEF2	Q96C03	454 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	CWC25	Q9NXE8	425 aa	Predicted RBP	12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	ABCF2	Q9UG63	623 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	TMCO5B	A8MYB1	307 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	PES1	O00541	588 aa	Known RBP	12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	IMPDH2	P12268	514 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	SKIL	P12757	684 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	LEKR1	Q6ZMV7	388 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	KRBA2	Q6ZNG9	492 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	CCDC191	Q8NCU4	936 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	FAXDC2	Q96IV6	333 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	SYNM	O15061	1565 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	MAPK8IP3	Q9UPT6	1336 aa		12.9	□□□□□ -0.34
PAX6-256	ENST00000639394	UHRF1BP1	Q6BDS2	1440 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	CDKL5	O76039	1030 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	ZRSR1	Q15695	479 aa	Known RBP	12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	NBPF8	Q3BBV2	869 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	HSP90AB2P	Q58FF8	381 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	PACS2	Q86VP3	889 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	LSM14A	Q8ND56	463 aa	Known RBP	12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	TBC1D32	Q96NH3	1257 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	LZTS2	Q9BRK4	669 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	TRAK1	Q9UPV9	953 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	PCDHGA4	Q9Y5G9	962 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	CGNL1	Q0VF96	1302 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	PREX1	Q8TCU6	1659 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	NCOA3	Q9Y6Q9	1424 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	PIK3C2B	O00750	1634 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	TRIM66	O15016	1216 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	CCDC186	Q7Z3E2	898 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	IQCG	Q9H095	443 aa	Known RBP	12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	GOPC	Q9HD26	462 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	SPATS2L	Q9NUQ6	558 aa	Known RBP	12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	NLRP1	Q9C000	1473 aa		12.89	□□□□□ -0.35
PAX6-256	ENST00000639394	HTATSF1	O43719	755 aa	Known RBP	12.88	□□□□□ -0.35
PAX6-256	ENST00000639394	BAG4	O95429	457 aa	Known RBP	12.88	□□□□□ -0.35
PAX6-256	ENST00000639394	SLC5A9	Q2M3M2	681 aa		12.88	□□□□□ -0.35
PAX6-256	ENST00000639394	RBM26	Q5T8P6	1007 aa	Known RBP	12.88	□□□□□ -0.35
PAX6-256	ENST00000639394	TEX11	Q8IYF3	940 aa		12.88	□□□□□ -0.35
PAX6-256	ENST00000639394	GIMAP7	Q8NHV1	300 aa		12.88	□□□□□ -0.35
PAX6-256	ENST00000639394	AGAP3	Q96P47	875 aa		12.88	□□□□□ -0.35
PAX6-256	ENST00000639394	ERVK-7	P63135	1459 aa		12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	FAM163B	P0C2L3	166 aa		12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	PRPH	P41219	470 aa		12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	RASA3	Q14644	834 aa		12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	CCDC181	Q5TID7	509 aa		12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	RBM12B	Q8IXT5	1001 aa	Known RBP	12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	DRAXIN	Q8NBI3	349 aa	Predicted RBP	12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	KIF2C	Q99661	725 aa		12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	PSD3	Q9NYI0	1048 aa		12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	ZNF232	Q9UNY5	417 aa		12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	MTMR7	Q9Y216	660 aa		12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	DDIT3	P35638	169 aa		12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	GET4	Q7L5D6	327 aa	Predicted RBP	12.87	□□□□□ -0.35
PAX6-256	ENST00000639394	KIF1B	O60333	1816 aa		12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	ADGRB3	O60242	1522 aa		12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	SMTNL1	A8MU46	457 aa		12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	TPD52L2	O43399	206 aa	Known RBP	12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	RDX	P35241	583 aa	Known RBP	12.86	□□□□□ -0.35
PAX6-256	ENST00000639394	NEXN	Q0ZGT2	675 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms