RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 CSB-PGBD3P0DP91 1061 aa6.67□□□□□ -1.34
ATM-228ENST00000639240 FGFR3P22607 806 aa6.67□□□□□ -1.34
ATM-228ENST00000639240 GTF2E1P29083 439 aaPredicted RBP6.67□□□□□ -1.34
ATM-228ENST00000639240 NCOA4Q13772 614 aa6.67□□□□□ -1.34
ATM-228ENST00000639240 PLA2G4EQ3MJ16 856 aa6.67□□□□□ -1.34
ATM-228ENST00000639240 DEPDC4Q8N2C3 294 aa6.67□□□□□ -1.34
ATM-228ENST00000639240 PGBD3Q8N328 593 aa6.67□□□□□ -1.34
ATM-228ENST00000639240 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.67□□□□□ -1.34
ATM-228ENST00000639240 ZDHHC1Q8WTX9 485 aa6.67□□□□□ -1.34
ATM-228ENST00000639240 AIDAQ96BJ3 306 aa6.67□□□□□ -1.34
ATM-228ENST00000639240 NIFKQ9BYG3 293 aaKnown RBP6.67□□□□□ -1.34
ATM-228ENST00000639240 A0A1W2PNR3 127 aa6.66□□□□□ -1.34
ATM-228ENST00000639240 ZBTB7BO15156 539 aaPredicted RBP6.66□□□□□ -1.34
ATM-228ENST00000639240 EPHA4P54764 986 aa6.66□□□□□ -1.34
ATM-228ENST00000639240 EFHC2Q5JST6 749 aa6.66□□□□□ -1.34
ATM-228ENST00000639240 TBC1D9Q6ZT07 1266 aa6.66□□□□□ -1.34
ATM-228ENST00000639240 BEND7Q8N7W2 519 aaPredicted RBP6.66□□□□□ -1.34
ATM-228ENST00000639240 C7orf43Q8WVR3 580 aa6.66□□□□□ -1.34
ATM-228ENST00000639240 EDARADDQ8WWZ3 215 aa6.66□□□□□ -1.34
ATM-228ENST00000639240 UCN2Q96RP3 112 aa6.66□□□□□ -1.34
ATM-228ENST00000639240 ZIC5Q96T25 663 aa6.66□□□□□ -1.34
ATM-228ENST00000639240 ZNF358Q9NW07 568 aa6.66□□□□□ -1.34
ATM-228ENST00000639240 NSFL1CQ9UNZ2 370 aaKnown RBP6.66□□□□□ -1.34
ATM-228ENST00000639240 KIAA1024Q9UPX6 916 aa6.66□□□□□ -1.34
ATM-228ENST00000639240 COL8A1P27658 744 aa6.65□□□□□ -1.34
ATM-228ENST00000639240 TXLNAP40222 546 aa6.65□□□□□ -1.34
ATM-228ENST00000639240 GTF2IP78347 998 aa6.65□□□□□ -1.34
ATM-228ENST00000639240 TNP2Q05952 138 aa6.65□□□□□ -1.34
ATM-228ENST00000639240 SH3PXD2AQ5TCZ1 1133 aa6.65□□□□□ -1.34
ATM-228ENST00000639240 LINC00114Q6XXX2 140 aa6.65□□□□□ -1.34
ATM-228ENST00000639240 STRN4Q9NRL3 753 aa6.65□□□□□ -1.34
ATM-228ENST00000639240 GGA1Q9UJY5 639 aa6.65□□□□□ -1.34
ATM-228ENST00000639240 PHF24Q9UPV7 400 aa6.65□□□□□ -1.34
ATM-228ENST00000639240 PCDHGC4Q9Y5F7 938 aa6.65□□□□□ -1.34
ATM-228ENST00000639240 MAPTP10636 758 aaKnown RBP6.64□□□□□ -1.35
ATM-228ENST00000639240 BMP4P12644 408 aa6.64□□□□□ -1.35
ATM-228ENST00000639240 FOXK2Q01167 660 aa6.64□□□□□ -1.35
ATM-228ENST00000639240 EML3Q32P44 896 aa6.64□□□□□ -1.35
ATM-228ENST00000639240 TBCELQ5QJ74 424 aa6.64□□□□□ -1.35
ATM-228ENST00000639240 NLRP8Q86W28 1048 aa6.64□□□□□ -1.35
ATM-228ENST00000639240 PROSER2Q86WR7 435 aaPredicted RBP6.64□□□□□ -1.35
ATM-228ENST00000639240 NFATC2IPQ8NCF5 419 aa6.64□□□□□ -1.35
ATM-228ENST00000639240 KRTAP9-9Q9BYP9 154 aa6.64□□□□□ -1.35
ATM-228ENST00000639240 KRTAP9-4Q9BYQ2 154 aa6.64□□□□□ -1.35
ATM-228ENST00000639240 SUV39H2Q9H5I1 410 aa6.64□□□□□ -1.35
ATM-228ENST00000639240 SCHIP1Q9P0W5 487 aaPredicted RBP6.64□□□□□ -1.35
ATM-228ENST00000639240 DCDC2BA2VCK2 349 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 KRBA1A5PL33 1030 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 A6NJR5 290 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 USP17L5A8MUK1 530 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 PHF20L1A8MW92 1017 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 ATXN7O15265 892 aaPredicted RBP6.63□□□□□ -1.35
ATM-228ENST00000639240 PROCP04070 461 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 CD33P20138 364 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 GRIN2CQ14957 1233 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 TNS4Q8IZW8 715 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 C1orf216Q8TAB5 229 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 CABP1Q9NZU7 370 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 GDF2Q9UK05 429 aaPredicted RBP6.63□□□□□ -1.35
ATM-228ENST00000639240 NOD1Q9Y239 953 aa6.63□□□□□ -1.35
ATM-228ENST00000639240 DKK1O94907 266 aa6.62□□□□□ -1.35
ATM-228ENST00000639240 EPXP11678 715 aa6.62□□□□□ -1.35
ATM-228ENST00000639240 CLDN10P78369 228 aa6.62□□□□□ -1.35
ATM-228ENST00000639240 ARSJQ5FYB0 599 aaPredicted RBP6.62□□□□□ -1.35
ATM-228ENST00000639240 SLCO4C1Q6ZQN7 724 aa6.62□□□□□ -1.35
ATM-228ENST00000639240 FNBP4Q8N3X1 1017 aaPredicted RBP6.62□□□□□ -1.35
ATM-228ENST00000639240 GOLGA6L1Q8N7Z2 621 aa6.62□□□□□ -1.35
ATM-228ENST00000639240 BTBD6Q96KE9 485 aa6.62□□□□□ -1.35
ATM-228ENST00000639240 SPOCK3Q9BQ16 436 aa6.62□□□□□ -1.35
ATM-228ENST00000639240 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
ATM-228ENST00000639240 NEURL1BA8MQ27 555 aa6.61□□□□□ -1.35
ATM-228ENST00000639240 IGHA1P01876 353 aa6.61□□□□□ -1.35
ATM-228ENST00000639240 HDGFL1Q5TGJ6 251 aa6.61□□□□□ -1.35
ATM-228ENST00000639240 FCHSD1Q86WN1 690 aa6.61□□□□□ -1.35
ATM-228ENST00000639240 L3MBTL2Q969R5 705 aa6.61□□□□□ -1.35
ATM-228ENST00000639240 ZDHHC3Q9NYG2 299 aa6.61□□□□□ -1.35
ATM-228ENST00000639240 EML1O00423 815 aa6.6□□□□□ -1.35
ATM-228ENST00000639240 KHNYNO15037 678 aaKnown RBP6.6□□□□□ -1.35
ATM-228ENST00000639240 EFSO43281 561 aa6.6□□□□□ -1.35
ATM-228ENST00000639240 LZTS3O60299 673 aaPredicted RBP6.6□□□□□ -1.35
ATM-228ENST00000639240 ARAFP10398 606 aa6.6□□□□□ -1.35
ATM-228ENST00000639240 NOS2P35228 1153 aa6.6□□□□□ -1.35
ATM-228ENST00000639240 FIGNL1Q6PIW4 674 aa6.6□□□□□ -1.35
ATM-228ENST00000639240 PODNQ7Z5L7 613 aa6.6□□□□□ -1.35
ATM-228ENST00000639240 SLC9A9Q8IVB4 645 aa6.6□□□□□ -1.35
ATM-228ENST00000639240 TEAD4Q15561 434 aa6.59□□□□□ -1.35
ATM-228ENST00000639240 NBPF1Q3BBV0 1214 aa6.59□□□□□ -1.35
ATM-228ENST00000639240 FAM182BQ5T319 152 aa6.59□□□□□ -1.35
ATM-228ENST00000639240 USP17L3A6NCW0 530 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 USP17L4A6NCW7 530 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 BACH1O14867 736 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 FAM157BP0CG42 384 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 DGKGP49619 791 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 PCBP4P57723 403 aaKnown RBP6.58□□□□□ -1.36
ATM-228ENST00000639240 PSME1Q06323 249 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 USP17L2Q6R6M4 530 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 USP17L1Q7RTZ2 530 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 PLEKHM2Q8IWE5 1019 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 TPCN2Q8NHX9 752 aa6.58□□□□□ -1.36
ATM-228ENST00000639240 MDFIQ99750 246 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms