RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 WDR33Q9C0J8 1336 aaKnown RBP11.34□□□□□ -0.59
NECAP1-215ENST00000639071 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.33□□□□□ -0.6
NECAP1-215ENST00000639071 GNAT3A8MTJ3 354 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 SRGAP3O43295 1099 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 HSPA4P34932 840 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 AK2P54819 239 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 HDGFL1Q5TGJ6 251 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 IL17REQ8NFR9 667 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 TSC1Q92574 1164 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 RPAP1Q9BWH6 1393 aaPredicted RBP11.33□□□□□ -0.6
NECAP1-215ENST00000639071 PLEKHG3A1L390 1219 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 NBPF7P0C2Y1 421 aaPredicted RBP11.33□□□□□ -0.6
NECAP1-215ENST00000639071 TTC12Q9H892 705 aaPredicted RBP11.33□□□□□ -0.6
NECAP1-215ENST00000639071 SNX14Q9Y5W7 946 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 RGPD1P0DJD0 1748 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 FLT4P35916 1363 aa11.33□□□□□ -0.6
NECAP1-215ENST00000639071 SOS1Q07889 1333 aaPredicted RBP11.33□□□□□ -0.6
NECAP1-215ENST00000639071 LARGE1O95461 756 aa11.32□□□□□ -0.6
NECAP1-215ENST00000639071 LTKP29376 864 aa11.32□□□□□ -0.6
NECAP1-215ENST00000639071 NLRP6P59044 892 aa11.32□□□□□ -0.6
NECAP1-215ENST00000639071 C14orf37Q86TY3 774 aa11.32□□□□□ -0.6
NECAP1-215ENST00000639071 HDGFP51858 240 aaKnown RBP11.32□□□□□ -0.6
NECAP1-215ENST00000639071 RHPN1Q8TCX5 695 aa11.32□□□□□ -0.6
NECAP1-215ENST00000639071 TUBGCP6Q96RT7 1819 aa11.32□□□□□ -0.6
NECAP1-215ENST00000639071 TECPR2O15040 1411 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 FAM177BA6PVY3 158 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 CASTP20810 708 aaKnown RBP11.31□□□□□ -0.6
NECAP1-215ENST00000639071 KIAA2012Q0VF49 1180 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 OS9Q13438 667 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-215ENST00000639071 CSPP1Q1MSJ5 1256 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 PI4K2BQ8TCG2 481 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 CHMP3Q9Y3E7 222 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 USP31Q70CQ4 1352 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 IGSF1Q8N6C5 1336 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 ADCY5O95622 1261 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 SYT1P21579 422 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 GIMAP6Q6P9H5 292 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 CCDC83Q8IWF9 413 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 SBNO1A3KN83 1393 aa11.31□□□□□ -0.6
NECAP1-215ENST00000639071 SGSM2O43147 1006 aa11.3□□□□□ -0.6
NECAP1-215ENST00000639071 PHF14O94880 888 aa11.3□□□□□ -0.6
NECAP1-215ENST00000639071 ZSCAN22P10073 491 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-215ENST00000639071 SSH3Q8TE77 659 aa11.3□□□□□ -0.6
NECAP1-215ENST00000639071 SIRT1Q96EB6 747 aa11.3□□□□□ -0.6
NECAP1-215ENST00000639071 RAD50Q92878 1312 aa11.3□□□□□ -0.6
NECAP1-215ENST00000639071 STX6O43752 255 aa11.3□□□□□ -0.6
NECAP1-215ENST00000639071 MCM5P33992 734 aa11.3□□□□□ -0.6
NECAP1-215ENST00000639071 SASS6Q6UVJ0 657 aa11.3□□□□□ -0.6
NECAP1-215ENST00000639071 LSG1Q9H089 658 aaKnown RBP11.3□□□□□ -0.6
NECAP1-215ENST00000639071 PPP6R1Q9UPN7 881 aa11.3□□□□□ -0.6
NECAP1-215ENST00000639071 SMC3Q9UQE7 1217 aa11.3□□□□□ -0.6
NECAP1-215ENST00000639071 XRN1Q8IZH2 1706 aaKnown RBP11.3□□□□□ -0.6
NECAP1-215ENST00000639071 SSH2Q76I76 1423 aa11.3□□□□□ -0.6
NECAP1-215ENST00000639071 TMEM2Q9UHN6 1383 aa11.29□□□□□ -0.6
NECAP1-215ENST00000639071 TERF1P54274 439 aa11.29□□□□□ -0.6
NECAP1-215ENST00000639071 TAF7Q15545 349 aaPredicted RBP11.29□□□□□ -0.6
NECAP1-215ENST00000639071 CCDC183Q5T5S1 534 aa11.29□□□□□ -0.6
NECAP1-215ENST00000639071 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
NECAP1-215ENST00000639071 ADAMTS13Q76LX8 1427 aa11.29□□□□□ -0.6
NECAP1-215ENST00000639071 FAM208AQ9UK61 1670 aaKnown RBP11.29□□□□□ -0.6
NECAP1-215ENST00000639071 KDRP35968 1356 aa11.29□□□□□ -0.6
NECAP1-215ENST00000639071 VPS37CA5D8V6 355 aaPredicted RBP11.29□□□□□ -0.6
NECAP1-215ENST00000639071 KCNQ3O43525 872 aa11.29□□□□□ -0.6
NECAP1-215ENST00000639071 CEBPAP49715 358 aaPredicted RBP11.29□□□□□ -0.6
NECAP1-215ENST00000639071 DNM1Q05193 864 aaKnown RBP11.29□□□□□ -0.6
NECAP1-215ENST00000639071 ADCK5Q3MIX3 580 aa11.29□□□□□ -0.6
NECAP1-215ENST00000639071 PRPF40BQ6NWY9 871 aaKnown RBP11.29□□□□□ -0.6
NECAP1-215ENST00000639071 AMOTL2Q9Y2J4 779 aa11.29□□□□□ -0.6
NECAP1-215ENST00000639071 FMN2Q9NZ56 1722 aa11.29□□□□□ -0.6
NECAP1-215ENST00000639071 TNRQ92752 1358 aa11.29□□□□□ -0.6
NECAP1-215ENST00000639071 PI4KAP2A4QPH2 592 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 HOXC9P31274 260 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 PTH1RQ03431 593 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 CNTROBQ8N137 903 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 PI4KAP1Q8N8J0 262 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 NECAB1Q8N987 351 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 JAKMIP1Q96N16 626 aaKnown RBP11.28□□□□□ -0.6
NECAP1-215ENST00000639071 TTC14Q96N46 770 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 LIMCH1Q9UPQ0 1083 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 F13A1P00488 732 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 GJB2P29033 226 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 NALCNQ8IZF0 1738 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 LGR6Q9HBX8 967 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 DIAPH3Q9NSV4 1193 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
NECAP1-215ENST00000639071 COL9A3Q14050 684 aaPredicted RBP11.27□□□□□ -0.6
NECAP1-215ENST00000639071 SPC24Q8NBT2 197 aa11.27□□□□□ -0.6
NECAP1-215ENST00000639071 KIF1BPQ96EK5 621 aa11.27□□□□□ -0.6
NECAP1-215ENST00000639071 PA2G4Q9UQ80 394 aaKnown RBP11.27□□□□□ -0.6
NECAP1-215ENST00000639071 PTPRUQ92729 1446 aa11.27□□□□□ -0.61
NECAP1-215ENST00000639071 FAM173BQ6P4H8 233 aa11.27□□□□□ -0.61
NECAP1-215ENST00000639071 FERMT3Q86UX7 667 aa11.27□□□□□ -0.61
NECAP1-215ENST00000639071 TCEANC2Q96MN5 208 aa11.27□□□□□ -0.61
NECAP1-215ENST00000639071 AGLP35573 1532 aa11.27□□□□□ -0.61
NECAP1-215ENST00000639071 DYNC1I1O14576 645 aa11.26□□□□□ -0.61
NECAP1-215ENST00000639071 RAB11FIP3O75154 756 aa11.26□□□□□ -0.61
NECAP1-215ENST00000639071 UBE2HP62256 183 aa11.26□□□□□ -0.61
NECAP1-215ENST00000639071 POLA2Q14181 598 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms