RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	NMRK2	Q9NPI5	230 aa		11.19	□□□□□ -0.62
SPTAN1-238	ENST00000637903	CHRNA5	P30532	468 aa		11.18	□□□□□ -0.62
SPTAN1-238	ENST00000637903	SLC39A6	Q13433	755 aa		11.18	□□□□□ -0.62
SPTAN1-238	ENST00000637903	MTHFSD	Q2M296	383 aa	Known RBP	11.18	□□□□□ -0.62
SPTAN1-238	ENST00000637903	USPL1	Q5W0Q7	1092 aa		11.18	□□□□□ -0.62
SPTAN1-238	ENST00000637903	RBM46	Q8TBY0	533 aa	Known RBP	11.18	□□□□□ -0.62
SPTAN1-238	ENST00000637903	NARF	Q9UHQ1	456 aa		11.18	□□□□□ -0.62
SPTAN1-238	ENST00000637903	KCP	Q6ZWJ8	1503 aa		11.18	□□□□□ -0.62
SPTAN1-238	ENST00000637903	AFDN	P55196	1824 aa	Known RBP	11.18	□□□□□ -0.62
SPTAN1-238	ENST00000637903	NRXN2	Q9P2S2	1712 aa		11.18	□□□□□ -0.62
SPTAN1-238	ENST00000637903	HMOX1	P09601	288 aa		11.17	□□□□□ -0.62
SPTAN1-238	ENST00000637903	NFIX	Q14938	502 aa		11.17	□□□□□ -0.62
SPTAN1-238	ENST00000637903	BCL2L12	Q9HB09	334 aa		11.17	□□□□□ -0.62
SPTAN1-238	ENST00000637903	DIAPH1	O60610	1272 aa	Known RBP	11.16	□□□□□ -0.62
SPTAN1-238	ENST00000637903	RNF181	Q9P0P0	153 aa		11.16	□□□□□ -0.62
SPTAN1-238	ENST00000637903	ZBTB1	Q9Y2K1	713 aa		11.16	□□□□□ -0.62
SPTAN1-238	ENST00000637903	UBR2	Q8IWV8	1755 aa		11.16	□□□□□ -0.62
SPTAN1-238	ENST00000637903	COL15A1	P39059	1388 aa		11.16	□□□□□ -0.62
SPTAN1-238	ENST00000637903	KDM2B	Q8NHM5	1336 aa		11.15	□□□□□ -0.62
SPTAN1-238	ENST00000637903	FSTL1	Q12841	308 aa		11.15	□□□□□ -0.62
SPTAN1-238	ENST00000637903	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.14	□□□□□ -0.63
SPTAN1-238	ENST00000637903	DLEC1	Q9Y238	1755 aa		11.14	□□□□□ -0.63
SPTAN1-238	ENST00000637903	SERPINB2	P05120	415 aa		11.14	□□□□□ -0.63
SPTAN1-238	ENST00000637903	EIF5	P55010	431 aa	Known RBP	11.14	□□□□□ -0.63
SPTAN1-238	ENST00000637903	NPC1L1	Q9UHC9	1359 aa		11.14	□□□□□ -0.63
SPTAN1-238	ENST00000637903	WDR90	Q96KV7	1748 aa		11.13	□□□□□ -0.63
SPTAN1-238	ENST00000637903	STARD3NL	O95772	234 aa		11.13	□□□□□ -0.63
SPTAN1-238	ENST00000637903	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.13	□□□□□ -0.63
SPTAN1-238	ENST00000637903	IL17RE	Q8NFR9	667 aa		11.13	□□□□□ -0.63
SPTAN1-238	ENST00000637903	RRAGC	Q9HB90	399 aa		11.13	□□□□□ -0.63
SPTAN1-238	ENST00000637903	COL3A1	P02461	1466 aa	Predicted RBP	11.12	□□□□□ -0.63
SPTAN1-238	ENST00000637903	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.12	□□□□□ -0.63
SPTAN1-238	ENST00000637903		A0A087WZG4	1122 aa		11.12	□□□□□ -0.63
SPTAN1-238	ENST00000637903	LMNB1	P20700	586 aa		11.12	□□□□□ -0.63
SPTAN1-238	ENST00000637903	CANX	P27824	592 aa	Known RBP	11.12	□□□□□ -0.63
SPTAN1-238	ENST00000637903	PRELP	P51888	382 aa		11.12	□□□□□ -0.63
SPTAN1-238	ENST00000637903	CC2D1B	Q5T0F9	858 aa	Known RBP	11.12	□□□□□ -0.63
SPTAN1-238	ENST00000637903	TTLL6	Q8N841	843 aa		11.12	□□□□□ -0.63
SPTAN1-238	ENST00000637903	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.12	□□□□□ -0.63
SPTAN1-238	ENST00000637903	CCDC88A	Q3V6T2	1871 aa		11.12	□□□□□ -0.63
SPTAN1-238	ENST00000637903	SIPA1L3	O60292	1781 aa	Predicted RBP	11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903	GNAT3	A8MTJ3	354 aa		11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903		H0YIN7	160 aa		11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903	RASSF7	Q02833	373 aa		11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903	ZNF790	Q6PG37	636 aa		11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903	C2CD5	Q86YS7	1000 aa		11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903	TTC5	Q8N0Z6	440 aa		11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903	GAS2L2	Q8NHY3	880 aa		11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903	KLRG1	Q96E93	195 aa		11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903	ZNF496	Q96IT1	587 aa	Predicted RBP	11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903	PDZRN3	Q9UPQ7	1066 aa		11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903	HEG1	Q9ULI3	1381 aa		11.11	□□□□□ -0.63
SPTAN1-238	ENST00000637903	GLTPD2	A6NH11	291 aa		11.1	□□□□□ -0.63
SPTAN1-238	ENST00000637903	TEF	Q10587	303 aa		11.1	□□□□□ -0.63
SPTAN1-238	ENST00000637903	TBC1D9B	Q66K14	1250 aa		11.1	□□□□□ -0.63
SPTAN1-238	ENST00000637903	JMY	Q8N9B5	988 aa		11.1	□□□□□ -0.63
SPTAN1-238	ENST00000637903	CARMIL3	Q8ND23	1372 aa		11.1	□□□□□ -0.63
SPTAN1-238	ENST00000637903	ANKRD31	Q8N7Z5	1873 aa		11.1	□□□□□ -0.63
SPTAN1-238	ENST00000637903	PCNT	O95613	3336 aa		11.1	□□□□□ -0.63
SPTAN1-238	ENST00000637903	CEMIP	Q8WUJ3	1361 aa		11.09	□□□□□ -0.63
SPTAN1-238	ENST00000637903	NFKBIE	O00221	500 aa		11.09	□□□□□ -0.63
SPTAN1-238	ENST00000637903	IL6ST	P40189	918 aa	Predicted RBP	11.09	□□□□□ -0.63
SPTAN1-238	ENST00000637903	HTRA3	P83110	453 aa		11.09	□□□□□ -0.63
SPTAN1-238	ENST00000637903	DIEXF	Q68CQ4	756 aa	Known RBP	11.09	□□□□□ -0.63
SPTAN1-238	ENST00000637903	SMC1B	Q8NDV3	1235 aa		11.09	□□□□□ -0.63
SPTAN1-238	ENST00000637903	BRIP1	Q9BX63	1249 aa		11.09	□□□□□ -0.63
SPTAN1-238	ENST00000637903	U2SURP	O15042	1029 aa	Known RBP	11.08	□□□□□ -0.64
SPTAN1-238	ENST00000637903	VEGFA	P15692	232 aa	Predicted RBP	11.08	□□□□□ -0.64
SPTAN1-238	ENST00000637903	PDE6B	P35913	854 aa		11.08	□□□□□ -0.64
SPTAN1-238	ENST00000637903	BICDL1	Q6ZP65	573 aa		11.08	□□□□□ -0.64
SPTAN1-238	ENST00000637903	FMNL2	Q96PY5	1086 aa		11.08	□□□□□ -0.64
SPTAN1-238	ENST00000637903	DICER1	Q9UPY3	1922 aa	Known RBP	11.07	□□□□□ -0.64
SPTAN1-238	ENST00000637903	FER1L6	Q2WGJ9	1857 aa		11.07	□□□□□ -0.64
SPTAN1-238	ENST00000637903	POTEC	B2RU33	542 aa		11.07	□□□□□ -0.64
SPTAN1-238	ENST00000637903	CAMTA2	O94983	1202 aa		11.07	□□□□□ -0.64
SPTAN1-238	ENST00000637903	A1BG	P04217	495 aa		11.07	□□□□□ -0.64
SPTAN1-238	ENST00000637903	CNGB1	Q14028	1251 aa	Predicted RBP	11.07	□□□□□ -0.64
SPTAN1-238	ENST00000637903	PRR5L	Q6MZQ0	368 aa		11.07	□□□□□ -0.64
SPTAN1-238	ENST00000637903	PHACTR3	Q96KR7	559 aa		11.07	□□□□□ -0.64
SPTAN1-238	ENST00000637903	TBC1D2B	Q9UPU7	963 aa		11.07	□□□□□ -0.64
SPTAN1-238	ENST00000637903	SCN7A	Q01118	1682 aa		11.07	□□□□□ -0.64
SPTAN1-238	ENST00000637903	KCNQ3	O43525	872 aa		11.06	□□□□□ -0.64
SPTAN1-238	ENST00000637903	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
SPTAN1-238	ENST00000637903	SETDB2	Q96T68	719 aa		11.06	□□□□□ -0.64
SPTAN1-238	ENST00000637903	RSPH6A	Q9H0K4	717 aa		11.06	□□□□□ -0.64
SPTAN1-238	ENST00000637903	TIAM2	Q8IVF5	1701 aa		11.06	□□□□□ -0.64
SPTAN1-238	ENST00000637903	LTBP3	Q9NS15	1303 aa		11.06	□□□□□ -0.64
SPTAN1-238	ENST00000637903	BTBD11	A6QL63	1104 aa		11.05	□□□□□ -0.64
SPTAN1-238	ENST00000637903	ANP32C	O43423	234 aa		11.05	□□□□□ -0.64
SPTAN1-238	ENST00000637903	C21orf2	O43822	256 aa		11.05	□□□□□ -0.64
SPTAN1-238	ENST00000637903	COL11A2	P13942	1736 aa	Predicted RBP	11.05	□□□□□ -0.64
SPTAN1-238	ENST00000637903	DPY19L2	Q6NUT2	758 aa		11.05	□□□□□ -0.64
SPTAN1-238	ENST00000637903	USP16	Q9Y5T5	823 aa		11.05	□□□□□ -0.64
SPTAN1-238	ENST00000637903	SLX4	Q8IY92	1834 aa		11.05	□□□□□ -0.64
SPTAN1-238	ENST00000637903	SRGN	P10124	158 aa		11.04	□□□□□ -0.64
SPTAN1-238	ENST00000637903	PRKAR2B	P31323	418 aa		11.04	□□□□□ -0.64
SPTAN1-238	ENST00000637903	STYK1	Q6J9G0	422 aa		11.04	□□□□□ -0.64
SPTAN1-238	ENST00000637903	CLEC4G	Q6UXB4	293 aa		11.04	□□□□□ -0.64
SPTAN1-238	ENST00000637903	CCDC24	Q8N4L8	307 aa		11.04	□□□□□ -0.64
SPTAN1-238	ENST00000637903	CNKSR1	Q969H4	720 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms