RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 ZNF790Q6PG37 636 aa26.87■■□□□ 1.89
CLN6-222ENST00000637667 ZNF496Q96IT1 587 aaPredicted RBP26.87■■□□□ 1.89
CLN6-222ENST00000637667 BCS1LQ9Y276 419 aa26.87■■□□□ 1.89
CLN6-222ENST00000637667 ADCY9O60503 1353 aa26.86■■□□□ 1.89
CLN6-222ENST00000637667 CEMIPQ8WUJ3 1361 aa26.86■■□□□ 1.89
CLN6-222ENST00000637667 TM4SF1P30408 202 aa26.86■■□□□ 1.89
CLN6-222ENST00000637667 KIAA1551Q9HCM1 1747 aa26.86■■□□□ 1.89
CLN6-222ENST00000637667 NARFQ9UHQ1 456 aa26.86■■□□□ 1.89
CLN6-222ENST00000637667 UBR2Q8IWV8 1755 aa26.84■■□□□ 1.89
CLN6-222ENST00000637667 POLRMTO00411 1230 aaKnown RBP26.84■■□□□ 1.89
CLN6-222ENST00000637667 FCHSD2O94868 740 aa26.84■■□□□ 1.89
CLN6-222ENST00000637667 CANXP27824 592 aaKnown RBP26.84■■□□□ 1.89
CLN6-222ENST00000637667 HEG1Q9ULI3 1381 aa26.84■■□□□ 1.89
CLN6-222ENST00000637667 N4BP2Q86UW6 1770 aaPredicted RBP26.83■■□□□ 1.89
CLN6-222ENST00000637667 KCNA3P22001 575 aa26.82■■□□□ 1.88
CLN6-222ENST00000637667 TEX13AQ9BXU3 409 aaPredicted RBP26.82■■□□□ 1.88
CLN6-222ENST00000637667 NFIXQ14938 502 aa26.81■■□□□ 1.88
CLN6-222ENST00000637667 FMNL2Q96PY5 1086 aa26.81■■□□□ 1.88
CLN6-222ENST00000637667 EIF5P55010 431 aaKnown RBP26.8■■□□□ 1.88
CLN6-222ENST00000637667 BCL2L12Q9HB09 334 aa26.8■■□□□ 1.88
CLN6-222ENST00000637667 BTBD11A6QL63 1104 aa26.79■■□□□ 1.88
CLN6-222ENST00000637667 GPBP1L1Q9HC44 474 aaPredicted RBP26.79■■□□□ 1.88
CLN6-222ENST00000637667 PIM2Q9P1W9 311 aa26.79■■□□□ 1.88
CLN6-222ENST00000637667 SIPA1L3O60292 1781 aaPredicted RBP26.79■■□□□ 1.88
CLN6-222ENST00000637667 A0A087WZG4 1122 aa26.78■■□□□ 1.88
CLN6-222ENST00000637667 KCNQ3O43525 872 aa26.78■■□□□ 1.88
CLN6-222ENST00000637667 ARHGAP27Q6ZUM4 889 aa26.78■■□□□ 1.88
CLN6-222ENST00000637667 RTF1Q92541 710 aaKnown RBP26.78■■□□□ 1.88
CLN6-222ENST00000637667 ZNF526Q8TF50 670 aaPredicted RBP26.77■■□□□ 1.88
CLN6-222ENST00000637667 CHRNA5P30532 468 aa26.76■■□□□ 1.87
CLN6-222ENST00000637667 MCM10Q7L590 875 aa26.76■■□□□ 1.87
CLN6-222ENST00000637667 DALRD3Q5D0E6 543 aaKnown RBP26.75■■□□□ 1.87
CLN6-222ENST00000637667 HTATSF1O43719 755 aaKnown RBP26.73■■□□□ 1.87
CLN6-222ENST00000637667 SERPINB2P05120 415 aa26.73■■□□□ 1.87
CLN6-222ENST00000637667 IL6STP40189 918 aaPredicted RBP26.73■■□□□ 1.87
CLN6-222ENST00000637667 ZNF330Q9Y3S2 320 aaPredicted RBP26.73■■□□□ 1.87
CLN6-222ENST00000637667 BRCA1P38398 1863 aaKnown RBP26.72■■□□□ 1.87
CLN6-222ENST00000637667 A1BGP04217 495 aa26.72■■□□□ 1.87
CLN6-222ENST00000637667 DCTN1Q14203 1278 aa26.72■■□□□ 1.87
CLN6-222ENST00000637667 BICDL1Q6ZP65 573 aa26.7■■□□□ 1.86
CLN6-222ENST00000637667 TBC1D2BQ9UPU7 963 aa26.7■■□□□ 1.86
CLN6-222ENST00000637667 NPM2Q86SE8 214 aaKnown RBP26.69■■□□□ 1.86
CLN6-222ENST00000637667 NEFMP07197 916 aa26.68■■□□□ 1.86
CLN6-222ENST00000637667 IFFO2Q5TF58 517 aa26.68■■□□□ 1.86
CLN6-222ENST00000637667 TBC1D9BQ66K14 1250 aa26.68■■□□□ 1.86
CLN6-222ENST00000637667 USP16Q9Y5T5 823 aa26.68■■□□□ 1.86
CLN6-222ENST00000637667 SNRPA1P09661 255 aaKnown RBP26.67■■□□□ 1.86
CLN6-222ENST00000637667 NRXN2Q9P2S2 1712 aa26.67■■□□□ 1.86
CLN6-222ENST00000637667 PRAMEF22A3QJZ6 481 aa26.66■■□□□ 1.86
CLN6-222ENST00000637667 TAF7Q15545 349 aaPredicted RBP26.66■■□□□ 1.86
CLN6-222ENST00000637667 AFDNP55196 1824 aaKnown RBP26.66■■□□□ 1.86
CLN6-222ENST00000637667 ARFGEF1Q9Y6D6 1849 aa26.65■■□□□ 1.86
CLN6-222ENST00000637667 CAMTA2O94983 1202 aa26.65■■□□□ 1.86
CLN6-222ENST00000637667 C9orf131Q5VYM1 1079 aa26.65■■□□□ 1.86
CLN6-222ENST00000637667 CARMIL3Q8ND23 1372 aa26.64■■□□□ 1.86
CLN6-222ENST00000637667 PLEKHF1Q96S99 279 aa26.64■■□□□ 1.86
CLN6-222ENST00000637667 PIP4K2AP48426 406 aaPredicted RBP26.63■■□□□ 1.85
CLN6-222ENST00000637667 DZIP3Q86Y13 1208 aaKnown RBP26.63■■□□□ 1.85
CLN6-222ENST00000637667 C2CD5Q86YS7 1000 aa26.63■■□□□ 1.85
CLN6-222ENST00000637667 SCN7AQ01118 1682 aa26.63■■□□□ 1.85
CLN6-222ENST00000637667 KIF3CO14782 793 aa26.62■■□□□ 1.85
CLN6-222ENST00000637667 H0YIN7 160 aa26.61■■□□□ 1.85
CLN6-222ENST00000637667 RALBP1Q15311 655 aa26.61■■□□□ 1.85
CLN6-222ENST00000637667 NFE2L2Q16236 605 aa26.61■■□□□ 1.85
CLN6-222ENST00000637667 TTLL6Q8N841 843 aa26.61■■□□□ 1.85
CLN6-222ENST00000637667 MIS18AQ9NYP9 233 aa26.61■■□□□ 1.85
CLN6-222ENST00000637667 PRR5LQ6MZQ0 368 aa26.6■■□□□ 1.85
CLN6-222ENST00000637667 SETDB2Q96T68 719 aa26.6■■□□□ 1.85
CLN6-222ENST00000637667 PNNQ9H307 717 aaKnown RBP26.6■■□□□ 1.85
CLN6-222ENST00000637667 BRIP1Q9BX63 1249 aa26.59■■□□□ 1.85
CLN6-222ENST00000637667 RNF181Q9P0P0 153 aa26.59■■□□□ 1.85
CLN6-222ENST00000637667 PNISRQ8TF01 805 aaKnown RBP26.58■■□□□ 1.85
CLN6-222ENST00000637667 MAPK8IP3Q9UPT6 1336 aa26.58■■□□□ 1.85
CLN6-222ENST00000637667 NBPF26B4DH59 902 aa26.57■■□□□ 1.84
CLN6-222ENST00000637667 NBPF10Q6P3W6 841 aaKnown RBP26.57■■□□□ 1.84
CLN6-222ENST00000637667 CCDC24Q8N4L8 307 aa26.57■■□□□ 1.84
CLN6-222ENST00000637667 NBPF15Q8N660 670 aa26.57■■□□□ 1.84
CLN6-222ENST00000637667 PDZRN3Q9UPQ7 1066 aa26.57■■□□□ 1.84
CLN6-222ENST00000637667 PDE6BP35913 854 aa26.56■■□□□ 1.84
CLN6-222ENST00000637667 DDX10Q13206 875 aaKnown RBP26.56■■□□□ 1.84
CLN6-222ENST00000637667 CLEC4GQ6UXB4 293 aa26.56■■□□□ 1.84
CLN6-222ENST00000637667 CNBD1Q8NA66 436 aa26.56■■□□□ 1.84
CLN6-222ENST00000637667 THUMPD2Q9BTF0 503 aaKnown RBP26.56■■□□□ 1.84
CLN6-222ENST00000637667 NPHP1O15259 732 aa26.54■■□□□ 1.84
CLN6-222ENST00000637667 RASSF7Q02833 373 aa26.54■■□□□ 1.84
CLN6-222ENST00000637667 ZNF622Q969S3 477 aaKnown RBP eCLIP26.54■■□□□ 1.84
CLN6-222ENST00000637667 NMRK2Q9NPI5 230 aa26.54■■□□□ 1.84
CLN6-222ENST00000637667 ZNF652Q9Y2D9 606 aa26.54■■□□□ 1.84
CLN6-222ENST00000637667 DLEC1Q9Y238 1755 aa26.53■■□□□ 1.84
CLN6-222ENST00000637667 HSPA6P17066 643 aa26.52■■□□□ 1.84
CLN6-222ENST00000637667 ST5P78524 1137 aa26.52■■□□□ 1.84
CLN6-222ENST00000637667 BCORQ6W2J9 1755 aa26.51■■□□□ 1.83
CLN6-222ENST00000637667 RGL2O15211 777 aa26.51■■□□□ 1.83
CLN6-222ENST00000637667 EIF4A1P60842 406 aaKnown RBP26.51■■□□□ 1.83
CLN6-222ENST00000637667 CEP350Q5VT06 3117 aa26.51■■□□□ 1.83
CLN6-222ENST00000637667 DLG5Q8TDM6 1919 aa26.51■■□□□ 1.83
CLN6-222ENST00000637667 LMNB1P20700 586 aa26.5■■□□□ 1.83
CLN6-222ENST00000637667 NBPF5PQ86XG9 351 aaPredicted RBP26.5■■□□□ 1.83
CLN6-222ENST00000637667 ANKRD31Q8N7Z5 1873 aa26.5■■□□□ 1.83
CLN6-222ENST00000637667 TOMM70O94826 608 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms