RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 FKBP8Q14318 412 aa25.18■■□□□ 1.62
CLN6-221ENST00000637494 RALBP1Q15311 655 aa25.18■■□□□ 1.62
CLN6-221ENST00000637494 USPL1Q5W0Q7 1092 aa25.18■■□□□ 1.62
CLN6-221ENST00000637494 WWC3Q9ULE0 1092 aa25.18■■□□□ 1.62
CLN6-221ENST00000637494 A0A087WZG4 1122 aa25.17■■□□□ 1.62
CLN6-221ENST00000637494 NARFQ9UHQ1 456 aa25.17■■□□□ 1.62
CLN6-221ENST00000637494 SIPA1L3O60292 1781 aaPredicted RBP25.17■■□□□ 1.62
CLN6-221ENST00000637494 C10orf71Q711Q0 1435 aa25.17■■□□□ 1.62
CLN6-221ENST00000637494 KIF13BQ9NQT8 1826 aa25.15■■□□□ 1.62
CLN6-221ENST00000637494 MCM10Q7L590 875 aa25.15■■□□□ 1.62
CLN6-221ENST00000637494 DDX10Q13206 875 aaKnown RBP25.14■■□□□ 1.62
CLN6-221ENST00000637494 PXDNLA1KZ92 1463 aa25.14■■□□□ 1.61
CLN6-221ENST00000637494 MAPK8IP3Q9UPT6 1336 aa25.12■■□□□ 1.61
CLN6-221ENST00000637494 A0A0G2JLW4 131 aa25.12■■□□□ 1.61
CLN6-221ENST00000637494 ZNF330Q9Y3S2 320 aaPredicted RBP25.12■■□□□ 1.61
CLN6-221ENST00000637494 TM4SF1P30408 202 aa25.11■■□□□ 1.61
CLN6-221ENST00000637494 BCS1LQ9Y276 419 aa25.11■■□□□ 1.61
CLN6-221ENST00000637494 EIF5P55010 431 aaKnown RBP25.1■■□□□ 1.61
CLN6-221ENST00000637494 DDR1Q08345 913 aa25.1■■□□□ 1.61
CLN6-221ENST00000637494 DCTN1Q14203 1278 aa25.1■■□□□ 1.61
CLN6-221ENST00000637494 UTRNP46939 3433 aa25.09■■□□□ 1.61
CLN6-221ENST00000637494 N4BP2Q86UW6 1770 aaPredicted RBP25.09■■□□□ 1.61
CLN6-221ENST00000637494 POLRMTO00411 1230 aaKnown RBP25.09■■□□□ 1.61
CLN6-221ENST00000637494 DPEP1P16444 411 aa25.09■■□□□ 1.61
CLN6-221ENST00000637494 IL6STP40189 918 aaPredicted RBP25.09■■□□□ 1.61
CLN6-221ENST00000637494 KCNQ3O43525 872 aa25.08■■□□□ 1.61
CLN6-221ENST00000637494 TAF7Q15545 349 aaPredicted RBP25.08■■□□□ 1.61
CLN6-221ENST00000637494 SNRPA1P09661 255 aaKnown RBP25.07■■□□□ 1.6
CLN6-221ENST00000637494 NFIXQ14938 502 aa25.07■■□□□ 1.6
CLN6-221ENST00000637494 PNISRQ8TF01 805 aaKnown RBP25.07■■□□□ 1.6
CLN6-221ENST00000637494 PIM2Q9P1W9 311 aa25.07■■□□□ 1.6
CLN6-221ENST00000637494 NFE2L2Q16236 605 aa25.06■■□□□ 1.6
CLN6-221ENST00000637494 KIAA1551Q9HCM1 1747 aa25.06■■□□□ 1.6
CLN6-221ENST00000637494 A1BGP04217 495 aa25.05■■□□□ 1.6
CLN6-221ENST00000637494 PLEKHF1Q96S99 279 aa25.05■■□□□ 1.6
CLN6-221ENST00000637494 MYBBP1AQ9BQG0 1328 aaKnown RBP25.05■■□□□ 1.6
CLN6-221ENST00000637494 GIGYF1O75420 1035 aaPredicted RBP25.04■■□□□ 1.6
CLN6-221ENST00000637494 SERPINB2P05120 415 aa25.04■■□□□ 1.6
CLN6-221ENST00000637494 BICDL1Q6ZP65 573 aa25.03■■□□□ 1.6
CLN6-221ENST00000637494 BCL2L12Q9HB09 334 aa25.03■■□□□ 1.6
CLN6-221ENST00000637494 TBC1D2BQ9UPU7 963 aa25.03■■□□□ 1.6
CLN6-221ENST00000637494 GOLGB1Q14789 3259 aaKnown RBP25.02■■□□□ 1.6
CLN6-221ENST00000637494 DALRD3Q5D0E6 543 aaKnown RBP25.02■■□□□ 1.6
CLN6-221ENST00000637494 ARHGAP27Q6ZUM4 889 aa25.02■■□□□ 1.6
CLN6-221ENST00000637494 USP16Q9Y5T5 823 aa25.02■■□□□ 1.6
CLN6-221ENST00000637494 ATP10DQ9P241 1426 aa25.02■■□□□ 1.6
CLN6-221ENST00000637494 KCNA3P22001 575 aa25■■□□□ 1.59
CLN6-221ENST00000637494 DZIP3Q86Y13 1208 aaKnown RBP25■■□□□ 1.59
CLN6-221ENST00000637494 DLG5Q8TDM6 1919 aa25■■□□□ 1.59
CLN6-221ENST00000637494 SCN7AQ01118 1682 aa24.98■■□□□ 1.59
CLN6-221ENST00000637494 NPHP1O15259 732 aa24.98■■□□□ 1.59
CLN6-221ENST00000637494 CHRNA5P30532 468 aa24.98■■□□□ 1.59
CLN6-221ENST00000637494 WDR43Q15061 677 aaKnown RBP eCLIP24.98■■□□□ 1.59
CLN6-221ENST00000637494 TBC1D9BQ66K14 1250 aa24.98■■□□□ 1.59
CLN6-221ENST00000637494 GPBP1L1Q9HC44 474 aaPredicted RBP24.98■■□□□ 1.59
CLN6-221ENST00000637494 MIS18AQ9NYP9 233 aa24.98■■□□□ 1.59
CLN6-221ENST00000637494 CARMIL3Q8ND23 1372 aa24.97■■□□□ 1.59
CLN6-221ENST00000637494 ZEB1P37275 1124 aaPredicted RBP24.97■■□□□ 1.59
CLN6-221ENST00000637494 SETDB2Q96T68 719 aa24.97■■□□□ 1.59
CLN6-221ENST00000637494 ZNF652Q9Y2D9 606 aa24.97■■□□□ 1.59
CLN6-221ENST00000637494 AFDNP55196 1824 aaKnown RBP24.97■■□□□ 1.59
CLN6-221ENST00000637494 BRCA1P38398 1863 aaKnown RBP24.96■■□□□ 1.59
CLN6-221ENST00000637494 NRXN2Q9P2S2 1712 aa24.96■■□□□ 1.59
CLN6-221ENST00000637494 PRAMEF22A3QJZ6 481 aa24.96■■□□□ 1.59
CLN6-221ENST00000637494 C1QTNF8P60827 252 aa24.96■■□□□ 1.59
CLN6-221ENST00000637494 LMOD3Q0VAK6 560 aa24.96■■□□□ 1.59
CLN6-221ENST00000637494 ADCY9O60503 1353 aa24.95■■□□□ 1.59
CLN6-221ENST00000637494 CAMTA2O94983 1202 aa24.95■■□□□ 1.58
CLN6-221ENST00000637494 PIP4K2AP48426 406 aaPredicted RBP24.95■■□□□ 1.58
CLN6-221ENST00000637494 RIPK4P57078 832 aa24.95■■□□□ 1.58
CLN6-221ENST00000637494 H0YIN7 160 aa24.94■■□□□ 1.58
CLN6-221ENST00000637494 ZNF526Q8TF50 670 aaPredicted RBP24.94■■□□□ 1.58
CLN6-221ENST00000637494 PDZRN3Q9UPQ7 1066 aa24.94■■□□□ 1.58
CLN6-221ENST00000637494 ARFGEF1Q9Y6D6 1849 aa24.93■■□□□ 1.58
CLN6-221ENST00000637494 CLEC4GQ6UXB4 293 aa24.93■■□□□ 1.58
CLN6-221ENST00000637494 C2CD5Q86YS7 1000 aa24.93■■□□□ 1.58
CLN6-221ENST00000637494 THUMPD2Q9BTF0 503 aaKnown RBP24.93■■□□□ 1.58
CLN6-221ENST00000637494 PDE6BP35913 854 aa24.92■■□□□ 1.58
CLN6-221ENST00000637494 KDM3BQ7LBC6 1761 aa24.91■■□□□ 1.58
CLN6-221ENST00000637494 EIF4A1P60842 406 aaKnown RBP24.91■■□□□ 1.58
CLN6-221ENST00000637494 ST5P78524 1137 aa24.91■■□□□ 1.58
CLN6-221ENST00000637494 TTLL6Q8N841 843 aa24.91■■□□□ 1.58
CLN6-221ENST00000637494 CNBD1Q8NA66 436 aa24.91■■□□□ 1.58
CLN6-221ENST00000637494 LAMB4A4D0S4 1761 aa24.9■■□□□ 1.58
CLN6-221ENST00000637494 TMPOP42166 694 aaKnown RBP24.9■■□□□ 1.58
CLN6-221ENST00000637494 BRIP1Q9BX63 1249 aa24.9■■□□□ 1.58
CLN6-221ENST00000637494 TSPYL4Q9UJ04 414 aa24.9■■□□□ 1.58
CLN6-221ENST00000637494 BCORQ6W2J9 1755 aa24.9■■□□□ 1.58
CLN6-221ENST00000637494 PRR5LQ6MZQ0 368 aa24.89■■□□□ 1.58
CLN6-221ENST00000637494 PRKRIP1Q9H875 184 aaPredicted RBP24.89■■□□□ 1.58
CLN6-221ENST00000637494 NBPF26B4DH59 902 aa24.88■■□□□ 1.57
CLN6-221ENST00000637494 RGL2O15211 777 aa24.88■■□□□ 1.57
CLN6-221ENST00000637494 NBPF10Q6P3W6 841 aaKnown RBP24.88■■□□□ 1.57
CLN6-221ENST00000637494 NBPF15Q8N660 670 aa24.88■■□□□ 1.57
CLN6-221ENST00000637494 RUNDC1Q96C34 613 aa24.88■■□□□ 1.57
CLN6-221ENST00000637494 BABAM1Q9NWV8 329 aa24.88■■□□□ 1.57
CLN6-221ENST00000637494 NEUROD2Q15784 382 aa24.87■■□□□ 1.57
CLN6-221ENST00000637494 NBPF5PQ86XG9 351 aaPredicted RBP24.87■■□□□ 1.57
CLN6-221ENST00000637494 CCDC146Q8IYE0 955 aa24.87■■□□□ 1.57
CLN6-221ENST00000637494 C9orf131Q5VYM1 1079 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms