RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SLC4A2P04920 1241 aa19.51■□□□□ 0.71
CLN6-219ENST00000637329 TMOD3Q9NYL9 352 aa19.51■□□□□ 0.71
CLN6-219ENST00000637329 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
CLN6-219ENST00000637329 B4GALNT3Q6L9W6 998 aa19.5■□□□□ 0.71
CLN6-219ENST00000637329 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
CLN6-219ENST00000637329 ITPRIPQ8IWB1 547 aa19.49■□□□□ 0.71
CLN6-219ENST00000637329 SEPT12Q8IYM1 358 aa19.49■□□□□ 0.71
CLN6-219ENST00000637329 PELP1Q8IZL8 1130 aaKnown RBP19.49■□□□□ 0.71
CLN6-219ENST00000637329 CICQ96RK0 1608 aaPredicted RBP19.49■□□□□ 0.71
CLN6-219ENST00000637329 SNRPA1P09661 255 aaKnown RBP19.48■□□□□ 0.71
CLN6-219ENST00000637329 FLIIQ13045 1269 aa19.48■□□□□ 0.71
CLN6-219ENST00000637329 SLC39A6Q13433 755 aa19.48■□□□□ 0.71
CLN6-219ENST00000637329 KRT27Q7Z3Y8 459 aa19.48■□□□□ 0.71
CLN6-219ENST00000637329 TMEM57Q8N5G2 664 aa19.48■□□□□ 0.71
CLN6-219ENST00000637329 ZNF496Q96IT1 587 aaPredicted RBP19.48■□□□□ 0.71
CLN6-219ENST00000637329 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
CLN6-219ENST00000637329 ERBB4Q15303 1308 aa19.47■□□□□ 0.71
CLN6-219ENST00000637329 FAM98CQ17RN3 349 aaKnown RBP19.46■□□□□ 0.71
CLN6-219ENST00000637329 INTS3Q68E01 1043 aaKnown RBP19.46■□□□□ 0.71
CLN6-219ENST00000637329 CHPF2Q9P2E5 772 aa19.45■□□□□ 0.7
CLN6-219ENST00000637329 A0A0G2JS52 829 aa19.44■□□□□ 0.7
CLN6-219ENST00000637329 EIF2S2P20042 333 aaKnown RBP19.44■□□□□ 0.7
CLN6-219ENST00000637329 MYT1Q01538 1121 aa19.44■□□□□ 0.7
CLN6-219ENST00000637329 MARCH10Q8NA82 808 aaPredicted RBP19.44■□□□□ 0.7
CLN6-219ENST00000637329 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
CLN6-219ENST00000637329 CCT4P50991 539 aaKnown RBP19.43■□□□□ 0.7
CLN6-219ENST00000637329 FKBP5Q13451 457 aaPredicted RBP19.43■□□□□ 0.7
CLN6-219ENST00000637329 G2E3Q7L622 706 aa19.43■□□□□ 0.7
CLN6-219ENST00000637329 VSIG10Q8N0Z9 540 aa19.43■□□□□ 0.7
CLN6-219ENST00000637329 PIGBQ92521 554 aa19.43■□□□□ 0.7
CLN6-219ENST00000637329 NECTIN2Q92692 538 aa19.43■□□□□ 0.7
CLN6-219ENST00000637329 DDX21Q9NR30 783 aaKnown RBP eCLIP19.43■□□□□ 0.7
CLN6-219ENST00000637329 NHSQ6T4R5 1651 aa19.43■□□□□ 0.7
CLN6-219ENST00000637329 ATP10DQ9P241 1426 aa19.42■□□□□ 0.7
CLN6-219ENST00000637329 CENPQQ7L2Z9 268 aaPredicted RBP19.42■□□□□ 0.7
CLN6-219ENST00000637329 KDM2BQ8NHM5 1336 aa19.42■□□□□ 0.7
CLN6-219ENST00000637329 ZNF831Q5JPB2 1677 aa19.42■□□□□ 0.7
CLN6-219ENST00000637329 ZBTB40Q9NUA8 1239 aa19.41■□□□□ 0.7
CLN6-219ENST00000637329 PRAMEF22A3QJZ6 481 aa19.4■□□□□ 0.7
CLN6-219ENST00000637329 ONECUT3O60422 494 aaPredicted RBP19.4■□□□□ 0.7
CLN6-219ENST00000637329 TEX13AQ9BXU3 409 aaPredicted RBP19.4■□□□□ 0.7
CLN6-219ENST00000637329 IBTKQ9P2D0 1353 aaPredicted RBP19.4■□□□□ 0.7
CLN6-219ENST00000637329 TJP1Q07157 1748 aa19.39■□□□□ 0.7
CLN6-219ENST00000637329 R3HDM1Q15032 1099 aaKnown RBP19.39■□□□□ 0.69
CLN6-219ENST00000637329 ZBTB7BO15156 539 aaPredicted RBP19.38■□□□□ 0.69
CLN6-219ENST00000637329 DDX58O95786 925 aaKnown RBP19.38■□□□□ 0.69
CLN6-219ENST00000637329 PDIA6Q15084 440 aa19.38■□□□□ 0.69
CLN6-219ENST00000637329 BRWD3Q6RI45 1802 aa19.38■□□□□ 0.69
CLN6-219ENST00000637329 PHAXQ9H814 394 aaKnown RBP19.38■□□□□ 0.69
CLN6-219ENST00000637329 ATG3Q9NT62 314 aa19.38■□□□□ 0.69
CLN6-219ENST00000637329 EN1Q05925 392 aaPredicted RBP19.37■□□□□ 0.69
CLN6-219ENST00000637329 ADCY9O60503 1353 aa19.36■□□□□ 0.69
CLN6-219ENST00000637329 PRIM1P49642 420 aaKnown RBP19.36■□□□□ 0.69
CLN6-219ENST00000637329 ASAP1Q9ULH1 1129 aa19.36■□□□□ 0.69
CLN6-219ENST00000637329 USP16Q9Y5T5 823 aa19.36■□□□□ 0.69
CLN6-219ENST00000637329 F6X3S4 739 aa19.35■□□□□ 0.69
CLN6-219ENST00000637329 PTCD1O75127 700 aaKnown RBP19.35■□□□□ 0.69
CLN6-219ENST00000637329 PROSER3Q2NL68 480 aa19.35■□□□□ 0.69
CLN6-219ENST00000637329 LRP10Q7Z4F1 713 aa19.35■□□□□ 0.69
CLN6-219ENST00000637329 SYTL4Q96C24 671 aaPredicted RBP19.35■□□□□ 0.69
CLN6-219ENST00000637329 RREB1Q92766 1687 aa19.35■□□□□ 0.69
CLN6-219ENST00000637329 HDAC1Q13547 482 aaPredicted RBP19.34■□□□□ 0.69
CLN6-219ENST00000637329 DNAAF4Q8WXU2 420 aa19.34■□□□□ 0.69
CLN6-219ENST00000637329 SMARCC1Q92922 1105 aaPredicted RBP19.34■□□□□ 0.69
CLN6-219ENST00000637329 PCDHB15Q9Y5E8 787 aa19.34■□□□□ 0.69
CLN6-219ENST00000637329 ARFGEF2Q9Y6D5 1785 aa19.34■□□□□ 0.69
CLN6-219ENST00000637329 SLC4A10Q6U841 1118 aa19.33■□□□□ 0.68
CLN6-219ENST00000637329 KSR2Q6VAB6 950 aa19.33■□□□□ 0.68
CLN6-219ENST00000637329 RWDD1Q9H446 243 aaPredicted RBP19.33■□□□□ 0.68
CLN6-219ENST00000637329 NUP188Q5SRE5 1749 aa19.33■□□□□ 0.68
CLN6-219ENST00000637329 ANXA1P04083 346 aa19.32■□□□□ 0.68
CLN6-219ENST00000637329 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
CLN6-219ENST00000637329 BTAF1O14981 1849 aa19.31■□□□□ 0.68
CLN6-219ENST00000637329 PI4KAP2A4QPH2 592 aa19.31■□□□□ 0.68
CLN6-219ENST00000637329 STARD3NLO95772 234 aa19.31■□□□□ 0.68
CLN6-219ENST00000637329 GNAI3P08754 354 aa19.31■□□□□ 0.68
CLN6-219ENST00000637329 PI4KAP1Q8N8J0 262 aa19.31■□□□□ 0.68
CLN6-219ENST00000637329 SRCIN1Q9C0H9 1055 aa19.31■□□□□ 0.68
CLN6-219ENST00000637329 COL5A3P25940 1745 aaPredicted RBP19.31■□□□□ 0.68
CLN6-219ENST00000637329 ALDH1L1O75891 902 aa19.3■□□□□ 0.68
CLN6-219ENST00000637329 ACSBG1Q96GR2 724 aa19.3■□□□□ 0.68
CLN6-219ENST00000637329 RBM42Q9BTD8 480 aaKnown RBP19.3■□□□□ 0.68
CLN6-219ENST00000637329 PPP1R1BQ9UD71 204 aaPredicted RBP19.3■□□□□ 0.68
CLN6-219ENST00000637329 SBF2Q86WG5 1849 aa19.3■□□□□ 0.68
CLN6-219ENST00000637329 MYL6BP14649 208 aa19.29■□□□□ 0.68
CLN6-219ENST00000637329 BEND3Q5T5X7 828 aa19.29■□□□□ 0.68
CLN6-219ENST00000637329 XAGE3Q8WTP9 111 aa19.29■□□□□ 0.68
CLN6-219ENST00000637329 MAP3K2Q9Y2U5 619 aa19.29■□□□□ 0.68
CLN6-219ENST00000637329 NBPF26B4DH59 902 aa19.28■□□□□ 0.68
CLN6-219ENST00000637329 NBPF14Q5TI25 921 aa19.28■□□□□ 0.68
CLN6-219ENST00000637329 NBPF10Q6P3W6 841 aaKnown RBP19.28■□□□□ 0.68
CLN6-219ENST00000637329 DNAJC10Q8IXB1 793 aa19.28■□□□□ 0.68
CLN6-219ENST00000637329 NBPF15Q8N660 670 aa19.28■□□□□ 0.68
CLN6-219ENST00000637329 MEIS3Q99687 375 aa19.28■□□□□ 0.68
CLN6-219ENST00000637329 IGHDP01880 384 aa19.27■□□□□ 0.68
CLN6-219ENST00000637329 COPS6Q7L5N1 327 aa19.27■□□□□ 0.68
CLN6-219ENST00000637329 RPAP2Q8IXW5 612 aaPredicted RBP19.27■□□□□ 0.68
CLN6-219ENST00000637329 LINS1Q8NG48 757 aa19.27■□□□□ 0.68
CLN6-219ENST00000637329 CYP19A1P11511 503 aaPredicted RBP19.26■□□□□ 0.67
CLN6-219ENST00000637329 NEXNQ0ZGT2 675 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 211.7 ms