RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 PLEKHG5O94827 1062 aa18.06■□□□□ 0.48
THUMPD1-206ENST00000636554 ZSCAN22P10073 491 aaPredicted RBP18.06■□□□□ 0.48
THUMPD1-206ENST00000636554 CPA1P15085 419 aa18.06■□□□□ 0.48
THUMPD1-206ENST00000636554 PLCB2Q00722 1185 aa18.06■□□□□ 0.48
THUMPD1-206ENST00000636554 UVSSAQ2YD98 709 aa18.06■□□□□ 0.48
THUMPD1-206ENST00000636554 RASEFQ8IZ41 740 aa18.06■□□□□ 0.48
THUMPD1-206ENST00000636554 SNX14Q9Y5W7 946 aa18.06■□□□□ 0.48
THUMPD1-206ENST00000636554 RAD50Q92878 1312 aa18.06■□□□□ 0.48
THUMPD1-206ENST00000636554 SYT1P21579 422 aa18.05■□□□□ 0.48
THUMPD1-206ENST00000636554 MLECQ14165 292 aa18.05■□□□□ 0.48
THUMPD1-206ENST00000636554 CEP170BQ9Y4F5 1589 aaPredicted RBP18.05■□□□□ 0.48
THUMPD1-206ENST00000636554 SOS1Q07889 1333 aaPredicted RBP18.05■□□□□ 0.48
THUMPD1-206ENST00000636554 RUFY3Q7L099 469 aa18.05■□□□□ 0.48
THUMPD1-206ENST00000636554 TTC14Q96N46 770 aa18.05■□□□□ 0.48
THUMPD1-206ENST00000636554 STX6O43752 255 aa18.04■□□□□ 0.48
THUMPD1-206ENST00000636554 LARGE1O95461 756 aa18.04■□□□□ 0.48
THUMPD1-206ENST00000636554 GIMAP6Q6P9H5 292 aa18.04■□□□□ 0.48
THUMPD1-206ENST00000636554 USP44Q9H0E7 712 aa18.04■□□□□ 0.48
THUMPD1-206ENST00000636554 FMN2Q9NZ56 1722 aa18.04■□□□□ 0.48
THUMPD1-206ENST00000636554 ROBO2Q9HCK4 1378 aa18.04■□□□□ 0.48
THUMPD1-206ENST00000636554 AP5Z1O43299 807 aa18.04■□□□□ 0.48
THUMPD1-206ENST00000636554 UBE2HP62256 183 aa18.03■□□□□ 0.48
THUMPD1-206ENST00000636554 PI4K2BQ8TCG2 481 aa18.03■□□□□ 0.48
THUMPD1-206ENST00000636554 CCDC94Q9BW85 323 aaPredicted RBP18.03■□□□□ 0.48
THUMPD1-206ENST00000636554 SGSM2O43147 1006 aa18.03■□□□□ 0.48
THUMPD1-206ENST00000636554 F13A1P00488 732 aa18.03■□□□□ 0.48
THUMPD1-206ENST00000636554 TECPR2O15040 1411 aa18.03■□□□□ 0.48
THUMPD1-206ENST00000636554 USP6P35125 1406 aa18.03■□□□□ 0.48
THUMPD1-206ENST00000636554 UBTFL1P0CB47 393 aaPredicted RBP18.02■□□□□ 0.48
THUMPD1-206ENST00000636554 CCDC30Q5VVM6 783 aa18.02■□□□□ 0.48
THUMPD1-206ENST00000636554 SMAP1Q8IYB5 467 aaPredicted RBP18.02■□□□□ 0.48
THUMPD1-206ENST00000636554 PRIMPOLQ96LW4 560 aa18.02■□□□□ 0.48
THUMPD1-206ENST00000636554 SPG7Q9UQ90 795 aa18.02■□□□□ 0.48
THUMPD1-206ENST00000636554 AOX1Q06278 1338 aa18.02■□□□□ 0.48
THUMPD1-206ENST00000636554 KDM4AO75164 1064 aa18.02■□□□□ 0.47
THUMPD1-206ENST00000636554 LSG1Q9H089 658 aaKnown RBP18.02■□□□□ 0.47
THUMPD1-206ENST00000636554 SURF6O75683 361 aaKnown RBP18.01■□□□□ 0.47
THUMPD1-206ENST00000636554 FUCA2Q9BTY2 467 aa18.01■□□□□ 0.47
THUMPD1-206ENST00000636554 CWC27Q6UX04 472 aaKnown RBP18.01■□□□□ 0.47
THUMPD1-206ENST00000636554 DNAJC5Q9H3Z4 198 aa18.01■□□□□ 0.47
THUMPD1-206ENST00000636554 USP31Q70CQ4 1352 aa18.01■□□□□ 0.47
THUMPD1-206ENST00000636554 TOPAZ1Q8N9V7 1692 aa18■□□□□ 0.47
THUMPD1-206ENST00000636554 DNM1Q05193 864 aaKnown RBP18■□□□□ 0.47
THUMPD1-206ENST00000636554 PPP1R42Q7Z4L9 355 aa18■□□□□ 0.47
THUMPD1-206ENST00000636554 SSH3Q8TE77 659 aa18■□□□□ 0.47
THUMPD1-206ENST00000636554 EYA1Q99502 592 aa18■□□□□ 0.47
THUMPD1-206ENST00000636554 KCNF1Q9H3M0 494 aa18■□□□□ 0.47
THUMPD1-206ENST00000636554 SPTLC3Q9NUV7 552 aa18■□□□□ 0.47
THUMPD1-206ENST00000636554 SMC3Q9UQE7 1217 aa18■□□□□ 0.47
THUMPD1-206ENST00000636554 N4BP2Q86UW6 1770 aaPredicted RBP18■□□□□ 0.47
THUMPD1-206ENST00000636554 SIPA1L2Q9P2F8 1722 aaPredicted RBP18■□□□□ 0.47
THUMPD1-206ENST00000636554 HMGN5P82970 282 aaKnown RBP18■□□□□ 0.47
THUMPD1-206ENST00000636554 LIMCH1Q9UPQ0 1083 aa18■□□□□ 0.47
THUMPD1-206ENST00000636554 KDRP35968 1356 aa18■□□□□ 0.47
THUMPD1-206ENST00000636554 LRRC37A3O60309 1634 aa18■□□□□ 0.47
THUMPD1-206ENST00000636554 CASTP20810 708 aaKnown RBP17.99■□□□□ 0.47
THUMPD1-206ENST00000636554 GTF2F1P35269 517 aaKnown RBP eCLIP17.99■□□□□ 0.47
THUMPD1-206ENST00000636554 CCDC83Q8IWF9 413 aa17.99■□□□□ 0.47
THUMPD1-206ENST00000636554 RHPN1Q8TCX5 695 aa17.99■□□□□ 0.47
THUMPD1-206ENST00000636554 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
THUMPD1-206ENST00000636554 PYCARDQ9ULZ3 195 aa17.99■□□□□ 0.47
THUMPD1-206ENST00000636554 SPC24Q8NBT2 197 aa17.99■□□□□ 0.47
THUMPD1-206ENST00000636554 LETM1O95202 739 aaPredicted RBP17.98■□□□□ 0.47
THUMPD1-206ENST00000636554 GJB2P29033 226 aa17.98■□□□□ 0.47
THUMPD1-206ENST00000636554 OSCARQ8IYS5 282 aa17.98■□□□□ 0.47
THUMPD1-206ENST00000636554 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.98■□□□□ 0.47
THUMPD1-206ENST00000636554 EPB41L2O43491 1005 aaKnown RBP17.97■□□□□ 0.47
THUMPD1-206ENST00000636554 DDX54Q8TDD1 881 aaKnown RBP17.97■□□□□ 0.47
THUMPD1-206ENST00000636554 KIF3AQ9Y496 699 aa17.97■□□□□ 0.47
THUMPD1-206ENST00000636554 FLT4P35916 1363 aa17.97■□□□□ 0.47
THUMPD1-206ENST00000636554 ADCK5Q3MIX3 580 aa17.97■□□□□ 0.47
THUMPD1-206ENST00000636554 BCL2L12Q9HB09 334 aa17.97■□□□□ 0.47
THUMPD1-206ENST00000636554 ZHX1Q9UKY1 873 aaPredicted RBP17.97■□□□□ 0.47
THUMPD1-206ENST00000636554 IGSF1Q8N6C5 1336 aa17.97■□□□□ 0.47
THUMPD1-206ENST00000636554 SRGAP3O43295 1099 aa17.96■□□□□ 0.47
THUMPD1-206ENST00000636554 HYPKQ9NX55 129 aa17.96■□□□□ 0.47
THUMPD1-206ENST00000636554 MTMR6Q9Y217 621 aa17.96■□□□□ 0.47
THUMPD1-206ENST00000636554 PXDNLA1KZ92 1463 aa17.96■□□□□ 0.47
THUMPD1-206ENST00000636554 ST3GAL1Q11201 340 aa17.96■□□□□ 0.47
THUMPD1-206ENST00000636554 CNTROBQ8N137 903 aa17.96■□□□□ 0.47
THUMPD1-206ENST00000636554 CACNA1FO60840 1977 aa17.95■□□□□ 0.46
THUMPD1-206ENST00000636554 NBPF7P0C2Y1 421 aaPredicted RBP17.95■□□□□ 0.46
THUMPD1-206ENST00000636554 CBX1P83916 185 aa17.95■□□□□ 0.46
THUMPD1-206ENST00000636554 KIAA1524Q8TCG1 905 aa17.95■□□□□ 0.46
THUMPD1-206ENST00000636554 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
THUMPD1-206ENST00000636554 SBNO1A3KN83 1393 aa17.95■□□□□ 0.46
THUMPD1-206ENST00000636554 PLEKHG3A1L390 1219 aa17.95■□□□□ 0.46
THUMPD1-206ENST00000636554 VPS37CA5D8V6 355 aaPredicted RBP17.95■□□□□ 0.46
THUMPD1-206ENST00000636554 PTH1RQ03431 593 aa17.95■□□□□ 0.46
THUMPD1-206ENST00000636554 POLA2Q14181 598 aa17.95■□□□□ 0.46
THUMPD1-206ENST00000636554 GNAT3A8MTJ3 354 aa17.94■□□□□ 0.46
THUMPD1-206ENST00000636554 AMPHP49418 695 aa17.94■□□□□ 0.46
THUMPD1-206ENST00000636554 ATP2B3Q16720 1220 aa17.94■□□□□ 0.46
THUMPD1-206ENST00000636554 IL17REQ8NFR9 667 aa17.94■□□□□ 0.46
THUMPD1-206ENST00000636554 CHMP3Q9Y3E7 222 aa17.94■□□□□ 0.46
THUMPD1-206ENST00000636554 ATP6V1DQ9Y5K8 247 aa17.94■□□□□ 0.46
THUMPD1-206ENST00000636554 RAB11FIP3O75154 756 aa17.94■□□□□ 0.46
THUMPD1-206ENST00000636554 ZSCAN20P17040 1043 aaPredicted RBP17.94■□□□□ 0.46
THUMPD1-206ENST00000636554 PPP4R3BQ5MIZ7 849 aa17.94■□□□□ 0.46
THUMPD1-206ENST00000636554 HDGFL1Q5TGJ6 251 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms