RNA–Protein interactions for RNA: ENST00000636116.1

SYNGAP1-211, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-211ENST00000636116 WDR90Q96KV7 1748 aa10.18□□□□□ -0.78
SYNGAP1-211ENST00000636116 SOS1Q07889 1333 aaPredicted RBP10.17□□□□□ -0.78
SYNGAP1-211ENST00000636116 TJP1Q07157 1748 aa10.17□□□□□ -0.78
SYNGAP1-211ENST00000636116 HMOX1P09601 288 aa10.17□□□□□ -0.78
SYNGAP1-211ENST00000636116 EIF4G2P78344 907 aaKnown RBP eCLIP10.17□□□□□ -0.78
SYNGAP1-211ENST00000636116 AKAP4Q5JQC9 854 aa10.17□□□□□ -0.78
SYNGAP1-211ENST00000636116 NARFQ9UHQ1 456 aa10.17□□□□□ -0.78
SYNGAP1-211ENST00000636116 ADAMTS7Q9UKP4 1686 aa10.16□□□□□ -0.78
SYNGAP1-211ENST00000636116 RNMTO43148 476 aaKnown RBP10.16□□□□□ -0.78
SYNGAP1-211ENST00000636116 SERPINB2P05120 415 aa10.16□□□□□ -0.78
SYNGAP1-211ENST00000636116 CANXP27824 592 aaKnown RBP10.16□□□□□ -0.78
SYNGAP1-211ENST00000636116 BICDL1Q6ZP65 573 aa10.16□□□□□ -0.78
SYNGAP1-211ENST00000636116 SMC1BQ8NDV3 1235 aa10.16□□□□□ -0.78
SYNGAP1-211ENST00000636116 ZBTB1Q9Y2K1 713 aa10.16□□□□□ -0.78
SYNGAP1-211ENST00000636116 KNSTRNQ9Y448 316 aa10.16□□□□□ -0.78
SYNGAP1-211ENST00000636116 SBF1O95248 1867 aa10.16□□□□□ -0.78
SYNGAP1-211ENST00000636116 VEGFAP15692 232 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-211ENST00000636116 LMNB1P20700 586 aa10.15□□□□□ -0.78
SYNGAP1-211ENST00000636116 C2CD5Q86YS7 1000 aa10.15□□□□□ -0.78
SYNGAP1-211ENST00000636116 CCDC24Q8N4L8 307 aa10.15□□□□□ -0.78
SYNGAP1-211ENST00000636116 TTLL6Q8N841 843 aa10.15□□□□□ -0.78
SYNGAP1-211ENST00000636116 ZNF219Q9P2Y4 722 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-211ENST00000636116 SCN11AQ9UI33 1791 aa10.14□□□□□ -0.79
SYNGAP1-211ENST00000636116 GLTPD2A6NH11 291 aa10.14□□□□□ -0.79
SYNGAP1-211ENST00000636116 POTECB2RU33 542 aa10.14□□□□□ -0.79
SYNGAP1-211ENST00000636116 NFKBIEO00221 500 aa10.14□□□□□ -0.79
SYNGAP1-211ENST00000636116 MTHFSDQ2M296 383 aaKnown RBP10.14□□□□□ -0.79
SYNGAP1-211ENST00000636116 COL15A1P39059 1388 aa10.14□□□□□ -0.79
SYNGAP1-211ENST00000636116 CARMIL3Q8ND23 1372 aa10.14□□□□□ -0.79
SYNGAP1-211ENST00000636116 AFDNP55196 1824 aaKnown RBP10.13□□□□□ -0.79
SYNGAP1-211ENST00000636116 H0YIN7 160 aa10.13□□□□□ -0.79
SYNGAP1-211ENST00000636116 TNS4Q8IZW8 715 aa10.13□□□□□ -0.79
SYNGAP1-211ENST00000636116 AMER1Q5JTC6 1135 aaPredicted RBP10.12□□□□□ -0.79
SYNGAP1-211ENST00000636116 TBC1D9BQ66K14 1250 aa10.12□□□□□ -0.79
SYNGAP1-211ENST00000636116 ZNF622Q969S3 477 aaKnown RBP eCLIP10.12□□□□□ -0.79
SYNGAP1-211ENST00000636116 ZC3H4Q9UPT8 1303 aaKnown RBP10.11□□□□□ -0.79
SYNGAP1-211ENST00000636116 C21orf2O43822 256 aa10.11□□□□□ -0.79
SYNGAP1-211ENST00000636116 EIF5P55010 431 aaKnown RBP10.11□□□□□ -0.79
SYNGAP1-211ENST00000636116 VSIG10Q8N0Z9 540 aa10.11□□□□□ -0.79
SYNGAP1-211ENST00000636116 TBC1D2BQ9UPU7 963 aa10.11□□□□□ -0.79
SYNGAP1-211ENST00000636116 ZNF330Q9Y3S2 320 aaPredicted RBP10.11□□□□□ -0.79
SYNGAP1-211ENST00000636116 TNRC6CQ9HCJ0 1690 aaKnown RBP10.11□□□□□ -0.79
SYNGAP1-211ENST00000636116 CCDC88AQ3V6T2 1871 aa10.1□□□□□ -0.79
SYNGAP1-211ENST00000636116 STARD3NLO95772 234 aa10.1□□□□□ -0.79
SYNGAP1-211ENST00000636116 HSPA1AP0DMV8 641 aaKnown RBP10.1□□□□□ -0.79
SYNGAP1-211ENST00000636116 HSPA1BP0DMV9 641 aaKnown RBP10.1□□□□□ -0.79
SYNGAP1-211ENST00000636116 CNGB1Q14028 1251 aaPredicted RBP10.1□□□□□ -0.79
SYNGAP1-211ENST00000636116 DPY19L2Q6NUT2 758 aa10.1□□□□□ -0.79
SYNGAP1-211ENST00000636116 TTC5Q8N0Z6 440 aa10.1□□□□□ -0.79
SYNGAP1-211ENST00000636116 IL17REQ8NFR9 667 aa10.1□□□□□ -0.79
SYNGAP1-211ENST00000636116 ZNF496Q96IT1 587 aaPredicted RBP10.1□□□□□ -0.79
SYNGAP1-211ENST00000636116 NRXN2Q9P2S2 1712 aa10.1□□□□□ -0.79
SYNGAP1-211ENST00000636116 DIAPH1O60610 1272 aaKnown RBP10.09□□□□□ -0.79
SYNGAP1-211ENST00000636116 A1BGP04217 495 aa10.09□□□□□ -0.79
SYNGAP1-211ENST00000636116 POTEIP0CG38 1075 aa10.09□□□□□ -0.79
SYNGAP1-211ENST00000636116 POTEJP0CG39 1038 aa10.09□□□□□ -0.79
SYNGAP1-211ENST00000636116 ERFEQ4G0M1 354 aa10.09□□□□□ -0.79
SYNGAP1-211ENST00000636116 CC2D1BQ5T0F9 858 aaKnown RBP10.09□□□□□ -0.79
SYNGAP1-211ENST00000636116 PRR5LQ6MZQ0 368 aa10.09□□□□□ -0.79
SYNGAP1-211ENST00000636116 BRIP1Q9BX63 1249 aa10.09□□□□□ -0.79
SYNGAP1-211ENST00000636116 MRC1P22897 1456 aa10.09□□□□□ -0.79
SYNGAP1-211ENST00000636116 CLSPNQ9HAW4 1339 aa10.08□□□□□ -0.8
SYNGAP1-211ENST00000636116 A0A087WZG4 1122 aa10.08□□□□□ -0.8
SYNGAP1-211ENST00000636116 DDNO94850 711 aaPredicted RBP10.08□□□□□ -0.8
SYNGAP1-211ENST00000636116 PDE6BP35913 854 aa10.08□□□□□ -0.8
SYNGAP1-211ENST00000636116 DLEC1Q9Y238 1755 aa10.07□□□□□ -0.8
SYNGAP1-211ENST00000636116 U2SURPO15042 1029 aaKnown RBP10.07□□□□□ -0.8
SYNGAP1-211ENST00000636116 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
SYNGAP1-211ENST00000636116 KCNQ3O43525 872 aa10.07□□□□□ -0.8
SYNGAP1-211ENST00000636116 PIP4K2AP48426 406 aaPredicted RBP10.07□□□□□ -0.8
SYNGAP1-211ENST00000636116 TEFQ10587 303 aa10.07□□□□□ -0.8
SYNGAP1-211ENST00000636116 ZNF790Q6PG37 636 aa10.07□□□□□ -0.8
SYNGAP1-211ENST00000636116 MKRN1Q9UHC7 482 aaKnown RBP10.07□□□□□ -0.8
SYNGAP1-211ENST00000636116 PCNTO95613 3336 aa10.07□□□□□ -0.8
SYNGAP1-211ENST00000636116 VIRMAQ69YN4 1812 aaKnown RBP10.07□□□□□ -0.8
SYNGAP1-211ENST00000636116 KIF7Q2M1P5 1343 aa10.07□□□□□ -0.8
SYNGAP1-211ENST00000636116 ANKRD31Q8N7Z5 1873 aa10.06□□□□□ -0.8
SYNGAP1-211ENST00000636116 HEG1Q9ULI3 1381 aa10.06□□□□□ -0.8
SYNGAP1-211ENST00000636116 GNAT3A8MTJ3 354 aa10.06□□□□□ -0.8
SYNGAP1-211ENST00000636116 NPHP1O15259 732 aa10.06□□□□□ -0.8
SYNGAP1-211ENST00000636116 CAMTA2O94983 1202 aa10.06□□□□□ -0.8
SYNGAP1-211ENST00000636116 CHADLQ6NUI6 762 aa10.06□□□□□ -0.8
SYNGAP1-211ENST00000636116 SETDB2Q96T68 719 aa10.06□□□□□ -0.8
SYNGAP1-211ENST00000636116 TEX13AQ9BXU3 409 aaPredicted RBP10.06□□□□□ -0.8
SYNGAP1-211ENST00000636116 TIAM2Q8IVF5 1701 aa10.06□□□□□ -0.8
SYNGAP1-211ENST00000636116 IL6STP40189 918 aaPredicted RBP10.05□□□□□ -0.8
SYNGAP1-211ENST00000636116 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-211ENST00000636116 CNBD1Q8NA66 436 aa10.05□□□□□ -0.8
SYNGAP1-211ENST00000636116 PHACTR3Q96KR7 559 aa10.05□□□□□ -0.8
SYNGAP1-211ENST00000636116 FMNL2Q96PY5 1086 aa10.05□□□□□ -0.8
SYNGAP1-211ENST00000636116 TAOK3Q9H2K8 898 aa10.05□□□□□ -0.8
SYNGAP1-211ENST00000636116 PDZRN3Q9UPQ7 1066 aa10.05□□□□□ -0.8
SYNGAP1-211ENST00000636116 USP16Q9Y5T5 823 aa10.05□□□□□ -0.8
SYNGAP1-211ENST00000636116 UBR2Q8IWV8 1755 aa10.04□□□□□ -0.8
SYNGAP1-211ENST00000636116 PRAMEF22A3QJZ6 481 aa10.04□□□□□ -0.8
SYNGAP1-211ENST00000636116 SRGNP10124 158 aa10.04□□□□□ -0.8
SYNGAP1-211ENST00000636116 STYK1Q6J9G0 422 aa10.04□□□□□ -0.8
SYNGAP1-211ENST00000636116 NPM2Q86SE8 214 aaKnown RBP10.04□□□□□ -0.8
SYNGAP1-211ENST00000636116 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
SYNGAP1-211ENST00000636116 CNKSR1Q969H4 720 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms