RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 TAOK3Q9H2K8 898 aa7.37□□□□□ -1.23
GABRB3-218ENST00000635994 RTEL1-TNFRSF6BF6WH68 1400 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 CCDC117Q8IWD4 279 aaPredicted RBP7.36□□□□□ -1.23
GABRB3-218ENST00000635994 SREK1Q8WXA9 508 aaKnown RBP7.36□□□□□ -1.23
GABRB3-218ENST00000635994 PRKRIP1Q9H875 184 aaPredicted RBP7.36□□□□□ -1.23
GABRB3-218ENST00000635994 ANKIB1Q9P2G1 1089 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 ABCA8O94911 1581 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 BAG3O95817 575 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 MCM3P25205 808 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 NCBP1Q09161 790 aaKnown RBP7.36□□□□□ -1.23
GABRB3-218ENST00000635994 CABP2Q9NPB3 220 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 U3KPZ7 1027 aaPredicted RBP7.36□□□□□ -1.23
GABRB3-218ENST00000635994 ZMYM3Q14202 1370 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 IBSPP21815 317 aaPredicted RBP7.36□□□□□ -1.23
GABRB3-218ENST00000635994 ME1P48163 572 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 GSTO1P78417 241 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 LARP1Q6PKG0 1096 aaKnown RBP7.36□□□□□ -1.23
GABRB3-218ENST00000635994 CCDC82Q8N4S0 544 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 IL27Q8NEV9 243 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 CDK19Q9BWU1 502 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 PRKAR2BP31323 418 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 METTL24Q5JXM2 366 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 TAX1BP1Q86VP1 789 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 CDC5LQ99459 802 aaKnown RBP7.36□□□□□ -1.23
GABRB3-218ENST00000635994 SAMD9Q5K651 1589 aa7.36□□□□□ -1.23
GABRB3-218ENST00000635994 CCDC172P0C7W6 258 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 GSE1Q14687 1217 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 SPA17Q15506 151 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 CCDC96Q2M329 555 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 ACTN2P35609 894 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 ST5P78524 1137 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 AMPD3Q01432 767 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 FKBP4Q02790 459 aaKnown RBP eCLIP7.35□□□□□ -1.23
GABRB3-218ENST00000635994 DHX37Q8IY37 1157 aaKnown RBP7.35□□□□□ -1.23
GABRB3-218ENST00000635994 CCDC148Q8NFR7 591 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 TSPY26PQ9H489 355 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 TRAPPC8Q9Y2L5 1435 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 MAGI2Q86UL8 1455 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 ANKRD30BQ9BXX2 1392 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 BTBD11A6QL63 1104 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 GCOM1H8Y6P7 765 aaPredicted RBP7.35□□□□□ -1.23
GABRB3-218ENST00000635994 MYZAPP0CAP1 466 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 NEK4P51957 841 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 BICDL1Q6ZP65 573 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 FMNL2Q96PY5 1086 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 BCL11BQ9C0K0 894 aaPredicted RBP7.35□□□□□ -1.23
GABRB3-218ENST00000635994 MYO5CQ9NQX4 1742 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 ABCC5O15440 1437 aa7.35□□□□□ -1.23
GABRB3-218ENST00000635994 KIF2AO00139 706 aaPredicted RBP7.34□□□□□ -1.23
GABRB3-218ENST00000635994 EXOC5O00471 708 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 MYCNP04198 464 aaPredicted RBP7.34□□□□□ -1.23
GABRB3-218ENST00000635994 KIF5BP33176 963 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 BEGAINQ9BUH8 593 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 ATP7AQ04656 1500 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 RFX1P22670 979 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 CTNNA2P26232 953 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 MRE11P49959 708 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 CADPS2Q86UW7 1296 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 ERCC6L2Q5T890 1561 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 IDH1O75874 414 aaKnown RBP7.34□□□□□ -1.23
GABRB3-218ENST00000635994 SLC4A2P04920 1241 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 SMC1AQ14683 1233 aaKnown RBP7.34□□□□□ -1.23
GABRB3-218ENST00000635994 KIAA1328Q86T90 577 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 FAM43AQ8N2R8 423 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 PLVAPQ9BX97 442 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 ABCF2Q9UG63 623 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 CHMP4BP1P59074 171 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 ZGPATQ8N5A5 531 aaKnown RBP7.34□□□□□ -1.23
GABRB3-218ENST00000635994 PRAM1Q96QH2 718 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 TNMDQ9H2S6 317 aa7.34□□□□□ -1.23
GABRB3-218ENST00000635994 PPP1R42Q7Z4L9 355 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 CCDC83Q8IWF9 413 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 BRD4O60885 1362 aaPredicted RBP7.33□□□□□ -1.24
GABRB3-218ENST00000635994 RAB11FIP3O75154 756 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 PDE3AQ14432 1141 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 TTF1Q15361 905 aaPredicted RBP7.33□□□□□ -1.24
GABRB3-218ENST00000635994 SULT6B1Q6IMI4 303 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 DDX46Q7L014 1031 aaKnown RBP7.33□□□□□ -1.24
GABRB3-218ENST00000635994 AACSQ86V21 672 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 RPAP2Q8IXW5 612 aaPredicted RBP7.33□□□□□ -1.24
GABRB3-218ENST00000635994 NAPBQ9H115 298 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 ZBTB24O43167 697 aaPredicted RBP7.33□□□□□ -1.24
GABRB3-218ENST00000635994 ERMNQ8TAM6 284 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 MAGI3Q5TCQ9 1506 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 CCDC194A0A1B0GVG4 234 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 GSTTP1A0A1W2PQM5 241 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 IFIT5Q13325 482 aaKnown RBP7.33□□□□□ -1.24
GABRB3-218ENST00000635994 SMARCC1Q92922 1105 aaPredicted RBP7.33□□□□□ -1.24
GABRB3-218ENST00000635994 TTC12Q9H892 705 aaPredicted RBP7.33□□□□□ -1.24
GABRB3-218ENST00000635994 MAPKBP1O60336 1514 aa7.33□□□□□ -1.24
GABRB3-218ENST00000635994 MAP9Q49MG5 647 aa7.32□□□□□ -1.24
GABRB3-218ENST00000635994 CCDC174Q6PII3 467 aa7.32□□□□□ -1.24
GABRB3-218ENST00000635994 CACNA2D4Q7Z3S7 1137 aa7.32□□□□□ -1.24
GABRB3-218ENST00000635994 SPATA24Q86W54 205 aa7.32□□□□□ -1.24
GABRB3-218ENST00000635994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.32□□□□□ -1.24
GABRB3-218ENST00000635994 USO1O60763 962 aaKnown RBP7.32□□□□□ -1.24
GABRB3-218ENST00000635994 CASTP20810 708 aaKnown RBP7.32□□□□□ -1.24
GABRB3-218ENST00000635994 SKIDA1Q1XH10 827 aa7.32□□□□□ -1.24
GABRB3-218ENST00000635994 ARHGAP29Q52LW3 1261 aa7.32□□□□□ -1.24
GABRB3-218ENST00000635994 LARP1BQ659C4 914 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms