RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
GABRB3-217ENST00000635832 B4DLN1 442 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 MRPL12P52815 198 aaKnown RBP11.24□□□□□ -0.61
GABRB3-217ENST00000635832 GSTO1P78417 241 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 MYD88Q99836 296 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 HDAC9Q9UKV0 1011 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 LIG1P18858 919 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 MAP3K9P80192 1104 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 SSRP1Q08945 709 aaKnown RBP11.24□□□□□ -0.61
GABRB3-217ENST00000635832 MAP3K11Q16584 847 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 CCDC83Q8IWF9 413 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
GABRB3-217ENST00000635832 UTP14AQ9BVJ6 771 aaKnown RBP11.24□□□□□ -0.61
GABRB3-217ENST00000635832 DAPK1P53355 1430 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 ZNF213O14771 459 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 CA8P35219 290 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
GABRB3-217ENST00000635832 ACTN2P35609 894 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 PDE4BQ07343 736 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 CCDC178Q5BJE1 867 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 PPP1R42Q7Z4L9 355 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 USP37Q86T82 979 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 C16orf71Q8IYS4 520 aaPredicted RBP11.24□□□□□ -0.61
GABRB3-217ENST00000635832 DDX12PQ92771 950 aa11.24□□□□□ -0.61
GABRB3-217ENST00000635832 CASTP20810 708 aaKnown RBP11.23□□□□□ -0.61
GABRB3-217ENST00000635832 PAFAH1B1P43034 410 aa11.23□□□□□ -0.61
GABRB3-217ENST00000635832 RRS1Q15050 365 aaKnown RBP11.23□□□□□ -0.61
GABRB3-217ENST00000635832 CCDC113Q9H0I3 377 aa11.23□□□□□ -0.61
GABRB3-217ENST00000635832 TCP11L1Q9NUJ3 509 aa11.23□□□□□ -0.61
GABRB3-217ENST00000635832 KIF5CO60282 957 aa11.23□□□□□ -0.61
GABRB3-217ENST00000635832 IFFO1Q0D2I5 559 aa11.23□□□□□ -0.61
GABRB3-217ENST00000635832 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
GABRB3-217ENST00000635832 ANO10Q9NW15 660 aa11.23□□□□□ -0.61
GABRB3-217ENST00000635832 ZNF219Q9P2Y4 722 aaPredicted RBP11.23□□□□□ -0.61
GABRB3-217ENST00000635832 MACROD2A1Z1Q3 448 aa11.23□□□□□ -0.61
GABRB3-217ENST00000635832 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
GABRB3-217ENST00000635832 FAM114A1Q8IWE2 563 aa11.23□□□□□ -0.61
GABRB3-217ENST00000635832 IGF1RP08069 1367 aa11.23□□□□□ -0.61
GABRB3-217ENST00000635832 TAF7Q15545 349 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-217ENST00000635832 CCDC174Q6PII3 467 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 DDX11Q96FC9 970 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 CEP63Q96MT8 703 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 SH2B1Q9NRF2 756 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-217ENST00000635832 HYPKQ9NX55 129 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 ERBINQ96RT1 1412 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 YEATS4O95619 227 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 CCDC172P0C7W6 258 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 FILIP1Q7Z7B0 1213 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 UBXN4Q92575 508 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 ZNF622Q969S3 477 aaKnown RBP eCLIP11.22□□□□□ -0.61
GABRB3-217ENST00000635832 SHTN1A0MZ66 631 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 GOLGA8AA7E2F4 631 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 GOLGA8BA8MQT2 603 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 SYCP3Q8IZU3 236 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 VTI1AQ96AJ9 217 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 NAA15Q9BXJ9 866 aaKnown RBP11.22□□□□□ -0.61
GABRB3-217ENST00000635832 SCAND2PQ9GZW5 306 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-217ENST00000635832 SAMM50Q9Y512 469 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 WIZO95785 1651 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 KIF4AO95239 1232 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 SFPQP23246 707 aaKnown RBP eCLIP11.22□□□□□ -0.61
GABRB3-217ENST00000635832 RFC4P35249 363 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 DUSP27Q5VZP5 1158 aa11.22□□□□□ -0.61
GABRB3-217ENST00000635832 SREK1Q8WXA9 508 aaKnown RBP11.22□□□□□ -0.61
GABRB3-217ENST00000635832 NCOA2Q15596 1464 aa11.21□□□□□ -0.61
GABRB3-217ENST00000635832 IFIT3O14879 490 aaKnown RBP11.21□□□□□ -0.61
GABRB3-217ENST00000635832 TDRD12Q587J7 1177 aaKnown RBP11.21□□□□□ -0.61
GABRB3-217ENST00000635832 LRSAM1Q6UWE0 723 aa11.21□□□□□ -0.61
GABRB3-217ENST00000635832 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.61
GABRB3-217ENST00000635832 ZNF710Q8N1W2 664 aa11.21□□□□□ -0.61
GABRB3-217ENST00000635832 ERMNQ8TAM6 284 aa11.21□□□□□ -0.61
GABRB3-217ENST00000635832 KAT14Q9H8E8 782 aa11.21□□□□□ -0.61
GABRB3-217ENST00000635832 CCDC40Q4G0X9 1142 aa11.21□□□□□ -0.62
GABRB3-217ENST00000635832 NUTM1Q86Y26 1132 aa11.21□□□□□ -0.62
GABRB3-217ENST00000635832 ALS2CR12Q96Q35 445 aa11.21□□□□□ -0.62
GABRB3-217ENST00000635832 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.21□□□□□ -0.62
GABRB3-217ENST00000635832 STX6O43752 255 aa11.21□□□□□ -0.62
GABRB3-217ENST00000635832 MX1P20591 662 aa11.21□□□□□ -0.62
GABRB3-217ENST00000635832 GOPCQ9HD26 462 aa11.21□□□□□ -0.62
GABRB3-217ENST00000635832 CASKIN1Q8WXD9 1431 aa11.21□□□□□ -0.62
GABRB3-217ENST00000635832 FSD2A1L4K1 749 aa11.2□□□□□ -0.62
GABRB3-217ENST00000635832 CTAGE5O15320 804 aa11.2□□□□□ -0.62
GABRB3-217ENST00000635832 MRPS9P82933 396 aaKnown RBP11.2□□□□□ -0.62
GABRB3-217ENST00000635832 BICD1Q96G01 975 aa11.2□□□□□ -0.62
GABRB3-217ENST00000635832 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.2□□□□□ -0.62
GABRB3-217ENST00000635832 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
GABRB3-217ENST00000635832 C9orf84Q5VXU9 1444 aa11.2□□□□□ -0.62
GABRB3-217ENST00000635832 PRC1O43663 620 aa11.2□□□□□ -0.62
GABRB3-217ENST00000635832 LMAN1P49257 510 aa11.2□□□□□ -0.62
GABRB3-217ENST00000635832 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
GABRB3-217ENST00000635832 PHF8Q9UPP1 1060 aa11.2□□□□□ -0.62
GABRB3-217ENST00000635832 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
GABRB3-217ENST00000635832 TBCAO75347 108 aaKnown RBP11.19□□□□□ -0.62
GABRB3-217ENST00000635832 MTIF2P46199 727 aaKnown RBP11.19□□□□□ -0.62
GABRB3-217ENST00000635832 NCBP1Q09161 790 aaKnown RBP11.19□□□□□ -0.62
GABRB3-217ENST00000635832 TOP1P11387 765 aaKnown RBP11.19□□□□□ -0.62
GABRB3-217ENST00000635832 PLEKHH1Q9ULM0 1364 aa11.19□□□□□ -0.62
GABRB3-217ENST00000635832 TCERG1LQ5VWI1 586 aa11.19□□□□□ -0.62
GABRB3-217ENST00000635832 PDCL2Q8N4E4 241 aa11.19□□□□□ -0.62
GABRB3-217ENST00000635832 ZGPATQ8N5A5 531 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms