RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 EXOC5O00471 708 aa12.62□□□□□ -0.39
CACNA1A-216ENST00000635742 NGLY1Q96IV0 654 aa12.62□□□□□ -0.39
CACNA1A-216ENST00000635742 CHMP4AQ9BY43 222 aa12.62□□□□□ -0.39
CACNA1A-216ENST00000635742 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-216ENST00000635742 RWDD1Q9H446 243 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-216ENST00000635742 CCDC9Q9Y3X0 531 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-216ENST00000635742 HDAC1Q13547 482 aaPredicted RBP12.61□□□□□ -0.39
CACNA1A-216ENST00000635742 MEIS3Q99687 375 aa12.61□□□□□ -0.39
CACNA1A-216ENST00000635742 CDCA7Q9BWT1 371 aaPredicted RBP12.61□□□□□ -0.39
CACNA1A-216ENST00000635742 ATP10DQ9P241 1426 aa12.61□□□□□ -0.39
CACNA1A-216ENST00000635742 ADCY9O60503 1353 aa12.61□□□□□ -0.39
CACNA1A-216ENST00000635742 SNRPA1P09661 255 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-216ENST00000635742 CCT4P50991 539 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-216ENST00000635742 PDIA6Q15084 440 aa12.6□□□□□ -0.39
CACNA1A-216ENST00000635742 BARGINQ6ZT62 677 aa12.6□□□□□ -0.39
CACNA1A-216ENST00000635742 TMOD3Q9NYL9 352 aa12.6□□□□□ -0.39
CACNA1A-216ENST00000635742 VPS72Q15906 364 aa12.6□□□□□ -0.39
CACNA1A-216ENST00000635742 FNBP4Q8N3X1 1017 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-216ENST00000635742 DDX21Q9NR30 783 aaKnown RBP eCLIP12.6□□□□□ -0.39
CACNA1A-216ENST00000635742 USP16Q9Y5T5 823 aa12.6□□□□□ -0.39
CACNA1A-216ENST00000635742 DDB1Q16531 1140 aa12.59□□□□□ -0.39
CACNA1A-216ENST00000635742 PIGBQ92521 554 aa12.59□□□□□ -0.39
CACNA1A-216ENST00000635742 BCL9O00512 1426 aa12.59□□□□□ -0.39
CACNA1A-216ENST00000635742 SIRT2Q8IXJ6 389 aa12.58□□□□□ -0.39
CACNA1A-216ENST00000635742 THSD7AQ9UPZ6 1657 aa12.58□□□□□ -0.4
CACNA1A-216ENST00000635742 PI4KAP2A4QPH2 592 aa12.58□□□□□ -0.4
CACNA1A-216ENST00000635742 PIP4K2AP48426 406 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-216ENST00000635742 PI4KAP1Q8N8J0 262 aa12.58□□□□□ -0.4
CACNA1A-216ENST00000635742 DNAAF4Q8WXU2 420 aa12.58□□□□□ -0.4
CACNA1A-216ENST00000635742 HYPKQ9NX55 129 aa12.58□□□□□ -0.4
CACNA1A-216ENST00000635742 PTCD1O75127 700 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-216ENST00000635742 RGS3P49796 1198 aa12.57□□□□□ -0.4
CACNA1A-216ENST00000635742 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-216ENST00000635742 LRP10Q7Z4F1 713 aa12.57□□□□□ -0.4
CACNA1A-216ENST00000635742 MARCH10Q8NA82 808 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-216ENST00000635742 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
CACNA1A-216ENST00000635742 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
CACNA1A-216ENST00000635742 ARFGEF2Q9Y6D5 1785 aa12.56□□□□□ -0.4
CACNA1A-216ENST00000635742 MYL6BP14649 208 aa12.56□□□□□ -0.4
CACNA1A-216ENST00000635742 SMC5Q8IY18 1101 aa12.56□□□□□ -0.4
CACNA1A-216ENST00000635742 ATG3Q9NT62 314 aa12.56□□□□□ -0.4
CACNA1A-216ENST00000635742 USP21Q9UK80 565 aa12.56□□□□□ -0.4
CACNA1A-216ENST00000635742 KAT6BQ8WYB5 2073 aa12.56□□□□□ -0.4
CACNA1A-216ENST00000635742 BEND3Q5T5X7 828 aa12.56□□□□□ -0.4
CACNA1A-216ENST00000635742 MEX3CQ5U5Q3 659 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-216ENST00000635742 MAP3K2Q9Y2U5 619 aa12.56□□□□□ -0.4
CACNA1A-216ENST00000635742 TJP1Q07157 1748 aa12.56□□□□□ -0.4
CACNA1A-216ENST00000635742 AIMP1Q12904 312 aaKnown RBP12.55□□□□□ -0.4
CACNA1A-216ENST00000635742 CEP85Q6P2H3 762 aa12.55□□□□□ -0.4
CACNA1A-216ENST00000635742 KSR2Q6VAB6 950 aa12.55□□□□□ -0.4
CACNA1A-216ENST00000635742 XAGE3Q8WTP9 111 aa12.55□□□□□ -0.4
CACNA1A-216ENST00000635742 SRCIN1Q9C0H9 1055 aa12.55□□□□□ -0.4
CACNA1A-216ENST00000635742 NUP188Q5SRE5 1749 aa12.55□□□□□ -0.4
CACNA1A-216ENST00000635742 ANKRD44Q8N8A2 993 aa12.54□□□□□ -0.4
CACNA1A-216ENST00000635742 SYTL4Q96C24 671 aaPredicted RBP12.54□□□□□ -0.4
CACNA1A-216ENST00000635742 AFF2P51816 1311 aa12.54□□□□□ -0.4
CACNA1A-216ENST00000635742 NBPF26B4DH59 902 aa12.54□□□□□ -0.4
CACNA1A-216ENST00000635742 PRIM1P49642 420 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-216ENST00000635742 NBPF14Q5TI25 921 aa12.54□□□□□ -0.4
CACNA1A-216ENST00000635742 NBPF10Q6P3W6 841 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-216ENST00000635742 NBPF15Q8N660 670 aa12.54□□□□□ -0.4
CACNA1A-216ENST00000635742 ACSBG1Q96GR2 724 aa12.54□□□□□ -0.4
CACNA1A-216ENST00000635742 ERBB4Q15303 1308 aa12.54□□□□□ -0.4
CACNA1A-216ENST00000635742 GNAI3P08754 354 aa12.53□□□□□ -0.4
CACNA1A-216ENST00000635742 COPS6Q7L5N1 327 aa12.53□□□□□ -0.4
CACNA1A-216ENST00000635742 USP44Q9H0E7 712 aa12.53□□□□□ -0.4
CACNA1A-216ENST00000635742 ATRNO75882 1429 aa12.53□□□□□ -0.4
CACNA1A-216ENST00000635742 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-216ENST00000635742 DDX58O95786 925 aaKnown RBP12.52□□□□□ -0.4
CACNA1A-216ENST00000635742 A1BGP04217 495 aa12.52□□□□□ -0.4
CACNA1A-216ENST00000635742 GNAI2P04899 355 aa12.52□□□□□ -0.4
CACNA1A-216ENST00000635742 DNAJC10Q8IXB1 793 aa12.52□□□□□ -0.4
CACNA1A-216ENST00000635742 RPAP2Q8IXW5 612 aaPredicted RBP12.52□□□□□ -0.4
CACNA1A-216ENST00000635742 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.41
CACNA1A-216ENST00000635742 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-216ENST00000635742 A0A0G2JS52 829 aa12.51□□□□□ -0.41
CACNA1A-216ENST00000635742 PDE4AP27815 886 aa12.51□□□□□ -0.41
CACNA1A-216ENST00000635742 CWF19L2Q2TBE0 894 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-216ENST00000635742 HOMEZQ8IX15 550 aa12.51□□□□□ -0.41
CACNA1A-216ENST00000635742 VSIG10Q8N0Z9 540 aa12.51□□□□□ -0.41
CACNA1A-216ENST00000635742 GCC1Q96CN9 775 aa12.51□□□□□ -0.41
CACNA1A-216ENST00000635742 LRRFIP2Q9Y608 721 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-216ENST00000635742 ALDH1L1O75891 902 aa12.5□□□□□ -0.41
CACNA1A-216ENST00000635742 UBTFL1P0CB47 393 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-216ENST00000635742 NUCB1Q02818 461 aa12.5□□□□□ -0.41
CACNA1A-216ENST00000635742 RIC3Q7Z5B4 369 aa12.5□□□□□ -0.41
CACNA1A-216ENST00000635742 CICQ96RK0 1608 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-216ENST00000635742 IGKV5-2P06315 115 aa12.5□□□□□ -0.41
CACNA1A-216ENST00000635742 NBPF7P0C2Y1 421 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-216ENST00000635742 LINS1Q8NG48 757 aa12.5□□□□□ -0.41
CACNA1A-216ENST00000635742 RBM19Q9Y4C8 960 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-216ENST00000635742 TTLL7Q6ZT98 887 aa12.49□□□□□ -0.41
CACNA1A-216ENST00000635742 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
CACNA1A-216ENST00000635742 GJD4Q96KN9 370 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-216ENST00000635742 MYD88Q99836 296 aa12.49□□□□□ -0.41
CACNA1A-216ENST00000635742 METTL22Q9BUU2 404 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-216ENST00000635742 LNPKQ9C0E8 428 aa12.49□□□□□ -0.41
CACNA1A-216ENST00000635742 BCL11AQ9H165 835 aa12.49□□□□□ -0.41
CACNA1A-216ENST00000635742 DCTPP1Q9H773 170 aa12.49□□□□□ -0.41
CACNA1A-216ENST00000635742 NHSQ6T4R5 1651 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms