RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 GPS2Q13227 327 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 MNS1Q8NEH6 495 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 PALD1Q9ULE6 856 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 KIF2AO00139 706 aaPredicted RBP9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 AK2P54819 239 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 HDGFL1Q5TGJ6 251 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 NGDNQ8NEJ9 315 aaKnown RBP9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 CHMP4CQ96CF2 233 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 OSBPL3Q9H4L5 887 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 SPG7Q9UQ90 795 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 SPHKAPQ2M3C7 1700 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 G3BP1Q13283 466 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 KIF18AQ8NI77 898 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 NUDT16Q96DE0 195 aaKnown RBP9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 SDF4Q9BRK5 362 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 CAVIN2O95810 425 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 TYRO3Q06418 890 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 KRT222Q8N1A0 295 aa9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 LTV1Q96GA3 475 aaPredicted RBP9.93□□□□□ -0.82
SMARCA2-246ENST00000635739 EPB41L2O43491 1005 aaKnown RBP9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 ZNF853P0CG23 659 aa9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 CEP135Q66GS9 1140 aa9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 CFAP45Q9UL16 551 aa9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 ABCC1P33527 1531 aa9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 TET3O43151 1660 aa9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 PIK3R4Q99570 1358 aa9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 CFAP74Q9C0B2 1584 aa9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 SHROOM2Q13796 1616 aa9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 ANO6Q4KMQ2 910 aa9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 FBXW7Q969H0 707 aa9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 FSD1Q9BTV5 496 aa9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 TFIP11Q9UBB9 837 aaKnown RBP9.92□□□□□ -0.82
SMARCA2-246ENST00000635739 CHL1O00533 1208 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 ERC1Q8IUD2 1116 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 KIAA1524Q8TCG1 905 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 ERICH4A6NGS2 130 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 STK3Q13188 491 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 TXNDC2Q86VQ3 553 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 DDX54Q8TDD1 881 aaKnown RBP9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 DACT1Q9NYF0 836 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 TAOK2Q9UL54 1235 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 SSH2Q76I76 1423 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 HSPA4P34932 840 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 CEBPZQ03701 1054 aaKnown RBP9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 GNL2Q13823 731 aaKnown RBP9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 CALCOCO1Q9P1Z2 691 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 CCDC171Q6TFL3 1326 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 RGS12O14924 1447 aa9.91□□□□□ -0.82
SMARCA2-246ENST00000635739 WASLO00401 505 aaPredicted RBP9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 GABPB1Q06547 395 aaPredicted RBP9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 DHX8Q14562 1220 aaKnown RBP9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 CEP57L1Q8IYX8 460 aa9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 RHPN1Q8TCX5 695 aa9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 TEFQ10587 303 aa9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 LUZP1Q86V48 1076 aa9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 ABCA6Q8N139 1617 aa9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 CEP152O94986 1710 aa9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 KIF1BO60333 1816 aa9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 PPP1R42Q7Z4L9 355 aa9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 BBXQ8WY36 941 aaPredicted RBP9.9□□□□□ -0.82
SMARCA2-246ENST00000635739 REREQ9P2R6 1566 aa9.9□□□□□ -0.83
SMARCA2-246ENST00000635739 SMC2O95347 1197 aa9.9□□□□□ -0.83
SMARCA2-246ENST00000635739 NECAB1Q8N987 351 aa9.9□□□□□ -0.83
SMARCA2-246ENST00000635739 NPHP3Q7Z494 1330 aa9.9□□□□□ -0.83
SMARCA2-246ENST00000635739 MED14O60244 1454 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 CCP110O43303 1012 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 G2E3Q7L622 706 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 TRMT1Q9NXH9 659 aaKnown RBP9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 ZRANB1Q9UGI0 708 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 PRDM4Q9UKN5 801 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 PYCARDQ9ULZ3 195 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 RAPGEF3O95398 923 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 FOSBP53539 338 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 ZNF397Q8NF99 534 aaPredicted RBP9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 ZNF396Q96N95 335 aaPredicted RBP9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 SNX14Q9Y5W7 946 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 RAD50Q92878 1312 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 FAM135BQ49AJ0 1406 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 KIAA1210Q9ULL0 1709 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 CTAGE5O15320 804 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 AOX1Q06278 1338 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 KLHL34Q8N239 644 aa9.89□□□□□ -0.83
SMARCA2-246ENST00000635739 SGSM2O43147 1006 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 GORABQ5T7V8 394 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 VPS53Q5VIR6 699 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 TIGD1Q96MW7 591 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 DNAJC5Q9H3Z4 198 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 SPTLC3Q9NUV7 552 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 ANO10Q9NW15 660 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 NPATQ14207 1427 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 KIAA0232Q92628 1395 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 GTF2F1P35269 517 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 TMEM87AQ8NBN3 555 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 SOS1Q07889 1333 aaPredicted RBP9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 PLEKHG5O94827 1062 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 SKILP12757 684 aa9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 EIF4A2Q14240 407 aaKnown RBP9.88□□□□□ -0.83
SMARCA2-246ENST00000635739 BMS1Q14692 1282 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms