RNA–Protein interactions for RNA: ENST00000635722.1

CHRNA7-204, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-204ENST00000635722 DLEC1Q9Y238 1755 aa28.35■■■□□ 2.13
CHRNA7-204ENST00000635722 CYP19A1P11511 503 aaPredicted RBP28.35■■■□□ 2.13
CHRNA7-204ENST00000635722 TM4SF1P30408 202 aa28.35■■■□□ 2.13
CHRNA7-204ENST00000635722 MTHFSDQ2M296 383 aaKnown RBP28.35■■■□□ 2.13
CHRNA7-204ENST00000635722 WDR90Q96KV7 1748 aa28.35■■■□□ 2.13
CHRNA7-204ENST00000635722 COL3A1P02461 1466 aaPredicted RBP28.34■■■□□ 2.13
CHRNA7-204ENST00000635722 TOMM70O94826 608 aa28.33■■■□□ 2.13
CHRNA7-204ENST00000635722 ZPR1O75312 459 aa28.32■■■□□ 2.12
CHRNA7-204ENST00000635722 NFIXQ14938 502 aa28.32■■■□□ 2.12
CHRNA7-204ENST00000635722 CC2D1BQ5T0F9 858 aaKnown RBP28.32■■■□□ 2.12
CHRNA7-204ENST00000635722 RNF181Q9P0P0 153 aa28.32■■■□□ 2.12
CHRNA7-204ENST00000635722 BCL2L12Q9HB09 334 aa28.31■■■□□ 2.12
CHRNA7-204ENST00000635722 CARMIL3Q8ND23 1372 aa28.31■■■□□ 2.12
CHRNA7-204ENST00000635722 TNRC6CQ9HCJ0 1690 aaKnown RBP28.3■■■□□ 2.12
CHRNA7-204ENST00000635722 APLP1P51693 650 aa28.3■■■□□ 2.12
CHRNA7-204ENST00000635722 RASSF7Q02833 373 aa28.3■■■□□ 2.12
CHRNA7-204ENST00000635722 SIPA1L3O60292 1781 aaPredicted RBP28.29■■■□□ 2.12
CHRNA7-204ENST00000635722 HTRA3P83110 453 aa28.28■■■□□ 2.12
CHRNA7-204ENST00000635722 CNGB1Q14028 1251 aaPredicted RBP28.28■■■□□ 2.12
CHRNA7-204ENST00000635722 SCN7AQ01118 1682 aa28.28■■■□□ 2.12
CHRNA7-204ENST00000635722 TIAM2Q8IVF5 1701 aa28.27■■■□□ 2.12
CHRNA7-204ENST00000635722 PER1O15534 1290 aaPredicted RBP28.27■■■□□ 2.12
CHRNA7-204ENST00000635722 NARFQ9UHQ1 456 aa28.27■■■□□ 2.12
CHRNA7-204ENST00000635722 ANKRD31Q8N7Z5 1873 aa28.27■■■□□ 2.12
CHRNA7-204ENST00000635722 DIAPH1O60610 1272 aaKnown RBP28.26■■■□□ 2.11
CHRNA7-204ENST00000635722 DNAJC5GQ8N7S2 189 aa28.26■■■□□ 2.11
CHRNA7-204ENST00000635722 PRELPP51888 382 aa28.25■■■□□ 2.11
CHRNA7-204ENST00000635722 COL11A2P13942 1736 aaPredicted RBP28.25■■■□□ 2.11
CHRNA7-204ENST00000635722 CANXP27824 592 aaKnown RBP28.24■■■□□ 2.11
CHRNA7-204ENST00000635722 RBM46Q8TBY0 533 aaKnown RBP28.23■■■□□ 2.11
CHRNA7-204ENST00000635722 CCDC88AQ3V6T2 1871 aa28.22■■■□□ 2.11
CHRNA7-204ENST00000635722 SERPINB2P05120 415 aa28.21■■■□□ 2.11
CHRNA7-204ENST00000635722 BICDL1Q6ZP65 573 aa28.21■■■□□ 2.11
CHRNA7-204ENST00000635722 RRAGCQ9HB90 399 aa28.21■■■□□ 2.11
CHRNA7-204ENST00000635722 C16orf71Q8IYS4 520 aaPredicted RBP28.2■■■□□ 2.1
CHRNA7-204ENST00000635722 PCNTO95613 3336 aa28.2■■■□□ 2.1
CHRNA7-204ENST00000635722 KDM2BQ8NHM5 1336 aa28.19■■■□□ 2.1
CHRNA7-204ENST00000635722 VSIG10Q8N0Z9 540 aa28.19■■■□□ 2.1
CHRNA7-204ENST00000635722 ZNF496Q96IT1 587 aaPredicted RBP28.19■■■□□ 2.1
CHRNA7-204ENST00000635722 U2SURPO15042 1029 aaKnown RBP28.17■■■□□ 2.1
CHRNA7-204ENST00000635722 EIF5P55010 431 aaKnown RBP28.17■■■□□ 2.1
CHRNA7-204ENST00000635722 C2CD5Q86YS7 1000 aa28.17■■■□□ 2.1
CHRNA7-204ENST00000635722 IL17REQ8NFR9 667 aa28.17■■■□□ 2.1
CHRNA7-204ENST00000635722 TTC5Q8N0Z6 440 aa28.16■■■□□ 2.1
CHRNA7-204ENST00000635722 CCDC24Q8N4L8 307 aa28.16■■■□□ 2.1
CHRNA7-204ENST00000635722 HEG1Q9ULI3 1381 aa28.15■■■□□ 2.1
CHRNA7-204ENST00000635722 TBC1D9BQ66K14 1250 aa28.15■■■□□ 2.1
CHRNA7-204ENST00000635722 ZNF330Q9Y3S2 320 aaPredicted RBP28.15■■■□□ 2.1
CHRNA7-204ENST00000635722 CACNA1SQ13698 1873 aa28.15■■■□□ 2.1
CHRNA7-204ENST00000635722 BCORQ6W2J9 1755 aa28.14■■■□□ 2.1
CHRNA7-204ENST00000635722 NFKBIEO00221 500 aa28.14■■■□□ 2.1
CHRNA7-204ENST00000635722 TTLL6Q8N841 843 aa28.13■■■□□ 2.09
CHRNA7-204ENST00000635722 STARD3NLO95772 234 aa28.12■■■□□ 2.09
CHRNA7-204ENST00000635722 FSTL1Q12841 308 aa28.12■■■□□ 2.09
CHRNA7-204ENST00000635722 ZNF790Q6PG37 636 aa28.12■■■□□ 2.09
CHRNA7-204ENST00000635722 TBC1D2BQ9UPU7 963 aa28.12■■■□□ 2.09
CHRNA7-204ENST00000635722 KCNQ3O43525 872 aa28.11■■■□□ 2.09
CHRNA7-204ENST00000635722 LMNB1P20700 586 aa28.11■■■□□ 2.09
CHRNA7-204ENST00000635722 TEFQ10587 303 aa28.11■■■□□ 2.09
CHRNA7-204ENST00000635722 NPC1L1Q9UHC9 1359 aa28.11■■■□□ 2.09
CHRNA7-204ENST00000635722 GNAT3A8MTJ3 354 aa28.1■■■□□ 2.09
CHRNA7-204ENST00000635722 FER1L6Q2WGJ9 1857 aa28.09■■■□□ 2.09
CHRNA7-204ENST00000635722 GAS2L2Q8NHY3 880 aa28.09■■■□□ 2.09
CHRNA7-204ENST00000635722 KLRG1Q96E93 195 aa28.09■■■□□ 2.09
CHRNA7-204ENST00000635722 ZNF219Q9P2Y4 722 aaPredicted RBP28.09■■■□□ 2.09
CHRNA7-204ENST00000635722 CEMIPQ8WUJ3 1361 aa28.09■■■□□ 2.09
CHRNA7-204ENST00000635722 H0YIN7 160 aa28.08■■■□□ 2.09
CHRNA7-204ENST00000635722 A1BGP04217 495 aa28.08■■■□□ 2.09
CHRNA7-204ENST00000635722 PRR5LQ6MZQ0 368 aa28.08■■■□□ 2.09
CHRNA7-204ENST00000635722 PHACTR3Q96KR7 559 aa28.08■■■□□ 2.09
CHRNA7-204ENST00000635722 ZC3H4Q9UPT8 1303 aaKnown RBP28.08■■■□□ 2.09
CHRNA7-204ENST00000635722 PIP4K2AP48426 406 aaPredicted RBP28.07■■■□□ 2.08
CHRNA7-204ENST00000635722 A0A087WZG4 1122 aa28.06■■■□□ 2.08
CHRNA7-204ENST00000635722 ZNF622Q969S3 477 aaKnown RBP eCLIP28.06■■■□□ 2.08
CHRNA7-204ENST00000635722 SLX4Q8IY92 1834 aa28.06■■■□□ 2.08
CHRNA7-204ENST00000635722 DICER1Q9UPY3 1922 aaKnown RBP28.06■■■□□ 2.08
CHRNA7-204ENST00000635722 GLTPD2A6NH11 291 aa28.05■■■□□ 2.08
CHRNA7-204ENST00000635722 PRKAR2BP31323 418 aa28.05■■■□□ 2.08
CHRNA7-204ENST00000635722 SMC1BQ8NDV3 1235 aa28.05■■■□□ 2.08
CHRNA7-204ENST00000635722 PRAMEF22A3QJZ6 481 aa28.04■■■□□ 2.08
CHRNA7-204ENST00000635722 CAMTA2O94983 1202 aa28.04■■■□□ 2.08
CHRNA7-204ENST00000635722 RSPH6AQ9H0K4 717 aa28.04■■■□□ 2.08
CHRNA7-204ENST00000635722 ARFGEF2Q9Y6D5 1785 aa28.04■■■□□ 2.08
CHRNA7-204ENST00000635722 C21orf2O43822 256 aa28.03■■■□□ 2.08
CHRNA7-204ENST00000635722 FMNL2Q96PY5 1086 aa28.03■■■□□ 2.08
CHRNA7-204ENST00000635722 IL6STP40189 918 aaPredicted RBP28.02■■■□□ 2.08
CHRNA7-204ENST00000635722 JMYQ8N9B5 988 aa28.02■■■□□ 2.08
CHRNA7-204ENST00000635722 BRIP1Q9BX63 1249 aa28.01■■■□□ 2.07
CHRNA7-204ENST00000635722 POTECB2RU33 542 aa28■■■□□ 2.07
CHRNA7-204ENST00000635722 BTBD11A6QL63 1104 aa27.99■■■□□ 2.07
CHRNA7-204ENST00000635722 VEGFAP15692 232 aaPredicted RBP27.99■■■□□ 2.07
CHRNA7-204ENST00000635722 CNBD1Q8NA66 436 aa27.99■■■□□ 2.07
CHRNA7-204ENST00000635722 TEX13AQ9BXU3 409 aaPredicted RBP27.99■■■□□ 2.07
CHRNA7-204ENST00000635722 PDE6BP35913 854 aa27.98■■■□□ 2.07
CHRNA7-204ENST00000635722 COL13A1Q5TAT6 717 aaPredicted RBP27.97■■■□□ 2.07
CHRNA7-204ENST00000635722 MCM10Q7L590 875 aa27.97■■■□□ 2.07
CHRNA7-204ENST00000635722 DZIP3Q86Y13 1208 aaKnown RBP27.97■■■□□ 2.07
CHRNA7-204ENST00000635722 USP16Q9Y5T5 823 aa27.97■■■□□ 2.07
CHRNA7-204ENST00000635722 SETDB2Q96T68 719 aa27.96■■■□□ 2.07
CHRNA7-204ENST00000635722 DCTN1Q14203 1278 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms