RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 RNF181Q9P0P0 153 aa20.96■□□□□ 0.95
SNRNP48-203ENST00000634363 DIAPH1O60610 1272 aaKnown RBP20.95■□□□□ 0.94
SNRNP48-203ENST00000634363 SOS1Q07889 1333 aaPredicted RBP20.95■□□□□ 0.94
SNRNP48-203ENST00000634363 ADAMTS7Q9UKP4 1686 aa20.93■□□□□ 0.94
SNRNP48-203ENST00000634363 PER1O15534 1290 aaPredicted RBP20.93■□□□□ 0.94
SNRNP48-203ENST00000634363 CANXP27824 592 aaKnown RBP20.93■□□□□ 0.94
SNRNP48-203ENST00000634363 NFIXQ14938 502 aa20.93■□□□□ 0.94
SNRNP48-203ENST00000634363 NARFQ9UHQ1 456 aa20.93■□□□□ 0.94
SNRNP48-203ENST00000634363 ZBTB1Q9Y2K1 713 aa20.93■□□□□ 0.94
SNRNP48-203ENST00000634363 RRAGCQ9HB90 399 aa20.92■□□□□ 0.94
SNRNP48-203ENST00000634363 KDM2BQ8NHM5 1336 aa20.92■□□□□ 0.94
SNRNP48-203ENST00000634363 COL15A1P39059 1388 aa20.91■□□□□ 0.94
SNRNP48-203ENST00000634363 AFDNP55196 1824 aaKnown RBP20.91■□□□□ 0.94
SNRNP48-203ENST00000634363 SBF1O95248 1867 aa20.9■□□□□ 0.94
SNRNP48-203ENST00000634363 KCPQ6ZWJ8 1503 aa20.9■□□□□ 0.94
SNRNP48-203ENST00000634363 U2SURPO15042 1029 aaKnown RBP20.9■□□□□ 0.94
SNRNP48-203ENST00000634363 SERPINB2P05120 415 aa20.9■□□□□ 0.94
SNRNP48-203ENST00000634363 BICDL1Q6ZP65 573 aa20.9■□□□□ 0.94
SNRNP48-203ENST00000634363 TTC5Q8N0Z6 440 aa20.9■□□□□ 0.94
SNRNP48-203ENST00000634363 NPC1L1Q9UHC9 1359 aa20.89■□□□□ 0.93
SNRNP48-203ENST00000634363 RBM46Q8TBY0 533 aaKnown RBP20.89■□□□□ 0.93
SNRNP48-203ENST00000634363 RASSF7Q02833 373 aa20.88■□□□□ 0.93
SNRNP48-203ENST00000634363 VSIG10Q8N0Z9 540 aa20.88■□□□□ 0.93
SNRNP48-203ENST00000634363 DNAJC5GQ8N7S2 189 aa20.88■□□□□ 0.93
SNRNP48-203ENST00000634363 BCL2L12Q9HB09 334 aa20.88■□□□□ 0.93
SNRNP48-203ENST00000634363 MRC1P22897 1456 aa20.88■□□□□ 0.93
SNRNP48-203ENST00000634363 STARD3NLO95772 234 aa20.87■□□□□ 0.93
SNRNP48-203ENST00000634363 HTRA3P83110 453 aa20.87■□□□□ 0.93
SNRNP48-203ENST00000634363 ZNF330Q9Y3S2 320 aaPredicted RBP20.87■□□□□ 0.93
SNRNP48-203ENST00000634363 TEFQ10587 303 aa20.86■□□□□ 0.93
SNRNP48-203ENST00000634363 C2CD5Q86YS7 1000 aa20.86■□□□□ 0.93
SNRNP48-203ENST00000634363 H0YIN7 160 aa20.85■□□□□ 0.93
SNRNP48-203ENST00000634363 TTLL6Q8N841 843 aa20.85■□□□□ 0.93
SNRNP48-203ENST00000634363 CCDC88AQ3V6T2 1871 aa20.84■□□□□ 0.93
SNRNP48-203ENST00000634363 GNAT3A8MTJ3 354 aa20.84■□□□□ 0.93
SNRNP48-203ENST00000634363 FSTL1Q12841 308 aa20.84■□□□□ 0.93
SNRNP48-203ENST00000634363 ZNF496Q96IT1 587 aaPredicted RBP20.84■□□□□ 0.93
SNRNP48-203ENST00000634363 A0A087WZG4 1122 aa20.83■□□□□ 0.93
SNRNP48-203ENST00000634363 IL17REQ8NFR9 667 aa20.83■□□□□ 0.93
SNRNP48-203ENST00000634363 UBR2Q8IWV8 1755 aa20.82■□□□□ 0.92
SNRNP48-203ENST00000634363 WDR90Q96KV7 1748 aa20.82■□□□□ 0.92
SNRNP48-203ENST00000634363 NRXN2Q9P2S2 1712 aa20.82■□□□□ 0.92
SNRNP48-203ENST00000634363 LMNB1P20700 586 aa20.82■□□□□ 0.92
SNRNP48-203ENST00000634363 EIF5P55010 431 aaKnown RBP20.82■□□□□ 0.92
SNRNP48-203ENST00000634363 ZNF790Q6PG37 636 aa20.82■□□□□ 0.92
SNRNP48-203ENST00000634363 ZNF622Q969S3 477 aaKnown RBP eCLIP20.82■□□□□ 0.921e-7■■□□□ 12.6
SNRNP48-203ENST00000634363 TBC1D2BQ9UPU7 963 aa20.82■□□□□ 0.92
SNRNP48-203ENST00000634363 DDX10Q13206 875 aaKnown RBP20.81■□□□□ 0.92
SNRNP48-203ENST00000634363 TBC1D9BQ66K14 1250 aa20.81■□□□□ 0.92
SNRNP48-203ENST00000634363 NPM2Q86SE8 214 aaKnown RBP20.81■□□□□ 0.92
SNRNP48-203ENST00000634363 CCDC24Q8N4L8 307 aa20.81■□□□□ 0.92
SNRNP48-203ENST00000634363 GAS2L2Q8NHY3 880 aa20.81■□□□□ 0.92
SNRNP48-203ENST00000634363 TEX13AQ9BXU3 409 aaPredicted RBP20.81■□□□□ 0.92
SNRNP48-203ENST00000634363 ZNF219Q9P2Y4 722 aaPredicted RBP20.81■□□□□ 0.92
SNRNP48-203ENST00000634363 CARMIL3Q8ND23 1372 aa20.8■□□□□ 0.92
SNRNP48-203ENST00000634363 TNRC6CQ9HCJ0 1690 aaKnown RBP20.8■□□□□ 0.92
SNRNP48-203ENST00000634363 DLEC1Q9Y238 1755 aa20.8■□□□□ 0.92
SNRNP48-203ENST00000634363 A1BGP04217 495 aa20.79■□□□□ 0.92
SNRNP48-203ENST00000634363 PRELPP51888 382 aa20.79■□□□□ 0.92
SNRNP48-203ENST00000634363 HEG1Q9ULI3 1381 aa20.79■□□□□ 0.92
SNRNP48-203ENST00000634363 GLTPD2A6NH11 291 aa20.78■□□□□ 0.92
SNRNP48-203ENST00000634363 NPHP1O15259 732 aa20.78■□□□□ 0.92
SNRNP48-203ENST00000634363 SMC1BQ8NDV3 1235 aa20.78■□□□□ 0.92
SNRNP48-203ENST00000634363 KLRG1Q96E93 195 aa20.78■□□□□ 0.92
SNRNP48-203ENST00000634363 VEGFAP15692 232 aaPredicted RBP20.77■□□□□ 0.92
SNRNP48-203ENST00000634363 PDE6BP35913 854 aa20.77■□□□□ 0.92
SNRNP48-203ENST00000634363 FMNL2Q96PY5 1086 aa20.77■□□□□ 0.92
SNRNP48-203ENST00000634363 BTBD11A6QL63 1104 aa20.76■□□□□ 0.91
SNRNP48-203ENST00000634363 KCNQ3O43525 872 aa20.76■□□□□ 0.91
SNRNP48-203ENST00000634363 C21orf2O43822 256 aa20.76■□□□□ 0.91
SNRNP48-203ENST00000634363 PHACTR3Q96KR7 559 aa20.76■□□□□ 0.91
SNRNP48-203ENST00000634363 ZC3H4Q9UPT8 1303 aaKnown RBP20.76■□□□□ 0.91
SNRNP48-203ENST00000634363 COL3A1P02461 1466 aaPredicted RBP20.75■□□□□ 0.91
SNRNP48-203ENST00000634363 ZNF316A6NFI3 1004 aaPredicted RBP20.75■□□□□ 0.91
SNRNP48-203ENST00000634363 NFKBIEO00221 500 aa20.75■□□□□ 0.91
SNRNP48-203ENST00000634363 IL6STP40189 918 aaPredicted RBP20.75■□□□□ 0.91
SNRNP48-203ENST00000634363 PRR5LQ6MZQ0 368 aa20.75■□□□□ 0.91
SNRNP48-203ENST00000634363 SETDB2Q96T68 719 aa20.75■□□□□ 0.91
SNRNP48-203ENST00000634363 BRIP1Q9BX63 1249 aa20.75■□□□□ 0.91
SNRNP48-203ENST00000634363 ANKRD31Q8N7Z5 1873 aa20.75■□□□□ 0.91
SNRNP48-203ENST00000634363 SIPA1L3O60292 1781 aaPredicted RBP20.74■□□□□ 0.91
SNRNP48-203ENST00000634363 PRKAR2BP31323 418 aa20.74■□□□□ 0.91
SNRNP48-203ENST00000634363 DPY19L2Q6NUT2 758 aa20.74■□□□□ 0.91
SNRNP48-203ENST00000634363 CFAP53Q96M91 514 aa20.74■□□□□ 0.91
SNRNP48-203ENST00000634363 PIP4K2AP48426 406 aaPredicted RBP20.73■□□□□ 0.91
SNRNP48-203ENST00000634363 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
SNRNP48-203ENST00000634363 ERFEQ4G0M1 354 aa20.72■□□□□ 0.91
SNRNP48-203ENST00000634363 DZIP3Q86Y13 1208 aaKnown RBP20.72■□□□□ 0.91
SNRNP48-203ENST00000634363 PDZRN3Q9UPQ7 1066 aa20.72■□□□□ 0.91
SNRNP48-203ENST00000634363 USP16Q9Y5T5 823 aa20.72■□□□□ 0.91
SNRNP48-203ENST00000634363 CNBD1Q8NA66 436 aa20.71■□□□□ 0.91
SNRNP48-203ENST00000634363 CACNA1SQ13698 1873 aa20.71■□□□□ 0.91
SNRNP48-203ENST00000634363 CAMTA2O94983 1202 aa20.7■□□□□ 0.9
SNRNP48-203ENST00000634363 ST5P78524 1137 aa20.7■□□□□ 0.9
SNRNP48-203ENST00000634363 JMYQ8N9B5 988 aa20.7■□□□□ 0.9
SNRNP48-203ENST00000634363 RTF1Q92541 710 aaKnown RBP20.7■□□□□ 0.9
SNRNP48-203ENST00000634363 RSPH6AQ9H0K4 717 aa20.7■□□□□ 0.9
SNRNP48-203ENST00000634363 NUDCQ9Y266 331 aa20.7■□□□□ 0.9
SNRNP48-203ENST00000634363 SCN7AQ01118 1682 aa20.7■□□□□ 0.9
SNRNP48-203ENST00000634363 U2AF1L5P0DN76 240 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms