RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 BCAR3O75815 825 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 UBE4AQ14139 1066 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 RNF41Q9H4P4 317 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 RAD54L2Q9Y4B4 1467 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 CCDC174Q6PII3 467 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 ZSCAN31Q96LW9 406 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 VAT1LQ9HCJ6 419 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 SLC12A7Q9Y666 1083 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 SLU7O95391 586 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 GCOM1H8Y6P7 765 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 MYZAPP0CAP1 466 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 SSRP1Q08945 709 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 CALML4Q96GE6 196 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 WDR33Q9C0J8 1336 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 CCDC7Q96M83 1385 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 PRC1O43663 620 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 SMC1AQ14683 1233 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 RAB3IL1Q8TBN0 382 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 LPXNO60711 386 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 SLC4A8Q2Y0W8 1093 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 NBPF6Q5VWK0 638 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 NBPF5PQ86XG9 351 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 NBPF4Q96M43 638 aa7.45□□□□□ -1.22
SRGAP1-207ENST00000631006 BIRC2Q13490 618 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 SLC52A1Q9NWF4 448 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 UPF3BQ9BZI7 483 aaKnown RBP7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 KAT14Q9H8E8 782 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 PARP3Q9Y6F1 533 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 UQCRHP07919 91 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 GPTP24298 496 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 RBM26Q5T8P6 1007 aaKnown RBP7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 PDE4BQ07343 736 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 JDP2Q8WYK2 163 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 PPP6R1Q9UPN7 881 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 PRG4Q92954 1404 aaPredicted RBP7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 AMOTQ4VCS5 1084 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 ARHGAP29Q52LW3 1261 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 TSR2Q969E8 191 aaKnown RBP7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 KIF4AO95239 1232 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 ACTN2P35609 894 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 C8orf37Q96NL8 207 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 VEZTQ9HBM0 779 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 ANKRD50Q9ULJ7 1429 aa7.44□□□□□ -1.22
SRGAP1-207ENST00000631006 IFFO1Q0D2I5 559 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 SREK1Q8WXA9 508 aaKnown RBP7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 DDX11Q96FC9 970 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 WWC3Q9ULE0 1092 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 SH3BP5O60239 455 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 PHACTR2O75167 634 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 KIF5BP33176 963 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 TCERG1LQ5VWI1 586 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 UQCRHLA0A096LP55 91 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 LUZP1Q86V48 1076 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 TEX13AQ9BXU3 409 aaPredicted RBP7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 TAOK3Q9H2K8 898 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 AMPD3Q01432 767 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 IL1RAPL2Q9NP60 686 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 NOD1Q9Y239 953 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 STX6O43752 255 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 KLHL10Q6JEL2 608 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 NUTM1Q86Y26 1132 aa7.43□□□□□ -1.22
SRGAP1-207ENST00000631006 F8W031 263 aaPredicted RBP7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 ZNF213O14771 459 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 NDC80O14777 642 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 ZBTB24O43167 697 aaPredicted RBP7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 TBCAO75347 108 aaKnown RBP7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 CASTP20810 708 aaKnown RBP7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 CCDC40Q4G0X9 1142 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 TDRD12Q587J7 1177 aaKnown RBP7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 USHBP1Q8N6Y0 703 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 MMRN2Q9H8L6 949 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 TSPY2A6NKD2 308 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 PPP4R3BQ5MIZ7 849 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 ZNF644Q9H582 1327 aaPredicted RBP7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 CCDC102AQ96A19 550 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 GOLGA8AA7E2F4 631 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 GOLGA8BA8MQT2 603 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 IFIT3O14879 490 aaKnown RBP7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 ZWINTO95229 277 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 TTF1Q15361 905 aaPredicted RBP7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 CFAP100Q494V2 611 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 CCDC82Q8N4S0 544 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 NUDT16Q96DE0 195 aaKnown RBP7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 ADAMTS8Q9UP79 889 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 ERBINQ96RT1 1412 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 PLEKHH2Q8IVE3 1493 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 DNA2P51530 1060 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 SETDB2Q96T68 719 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 AQRO60306 1485 aaKnown RBP eCLIP7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 TRAF1Q13077 416 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 PPP1R14CQ8TAE6 165 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 ZNF408Q9H9D4 720 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 PDZRN3Q9UPQ7 1066 aa7.42□□□□□ -1.22
SRGAP1-207ENST00000631006 CCDC66A2RUB6 948 aa7.41□□□□□ -1.22
SRGAP1-207ENST00000631006 RAPGEF3O95398 923 aa7.41□□□□□ -1.22
SRGAP1-207ENST00000631006 USP37Q86T82 979 aa7.41□□□□□ -1.22
SRGAP1-207ENST00000631006 NUP62CLQ9H1M0 184 aa7.41□□□□□ -1.22
SRGAP1-207ENST00000631006 TCP11L1Q9NUJ3 509 aa7.41□□□□□ -1.22
SRGAP1-207ENST00000631006 ERMNQ8TAM6 284 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms