RNA–Protein interactions for RNA: ENST00000629999.2

DDX49-214, Transcript of DEAD-box helicase 49, humanhuman

TSL 5 BASIC

Gene DDX49, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-214ENST00000629999 TSHZ2Q9NRE2 1034 aa18.55■□□□□ 0.56
DDX49-214ENST00000629999 SNRPA1P09661 255 aaKnown RBP18.55■□□□□ 0.56
DDX49-214ENST00000629999 DDB1Q16531 1140 aa18.55■□□□□ 0.56
DDX49-214ENST00000629999 MEX3CQ5U5Q3 659 aaKnown RBP18.55■□□□□ 0.56
DDX49-214ENST00000629999 BCL9LQ86UU0 1499 aa18.54■□□□□ 0.56
DDX49-214ENST00000629999 CCT4P50991 539 aaKnown RBP18.54■□□□□ 0.56
DDX49-214ENST00000629999 ANP32EQ9BTT0 268 aa18.54■□□□□ 0.56
DDX49-214ENST00000629999 PTCD1O75127 700 aaKnown RBP18.53■□□□□ 0.56
DDX49-214ENST00000629999 MEIS3Q99687 375 aa18.53■□□□□ 0.56
DDX49-214ENST00000629999 USP16Q9Y5T5 823 aa18.53■□□□□ 0.56
DDX49-214ENST00000629999 PAPPAQ13219 1627 aa18.52■□□□□ 0.56
DDX49-214ENST00000629999 GLI3P10071 1580 aa18.52■□□□□ 0.56
DDX49-214ENST00000629999 SYTL4Q96C24 671 aaPredicted RBP18.52■□□□□ 0.56
DDX49-214ENST00000629999 A0A0G2JS52 829 aa18.51■□□□□ 0.55
DDX49-214ENST00000629999 MYL6BP14649 208 aa18.51■□□□□ 0.55
DDX49-214ENST00000629999 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
DDX49-214ENST00000629999 HDAC1Q13547 482 aaPredicted RBP18.51■□□□□ 0.55
DDX49-214ENST00000629999 FAM98CQ17RN3 349 aaKnown RBP18.51■□□□□ 0.55
DDX49-214ENST00000629999 BARGINQ6ZT62 677 aa18.51■□□□□ 0.55
DDX49-214ENST00000629999 PIGBQ92521 554 aa18.51■□□□□ 0.55
DDX49-214ENST00000629999 USP21Q9UK80 565 aa18.51■□□□□ 0.55
DDX49-214ENST00000629999 KCPQ6ZWJ8 1503 aa18.51■□□□□ 0.55
DDX49-214ENST00000629999 RGS3P49796 1198 aa18.51■□□□□ 0.55
DDX49-214ENST00000629999 VPS72Q15906 364 aa18.51■□□□□ 0.55
DDX49-214ENST00000629999 FNBP4Q8N3X1 1017 aaPredicted RBP18.51■□□□□ 0.55
DDX49-214ENST00000629999 DDX21Q9NR30 783 aaKnown RBP eCLIP18.51■□□□□ 0.55
DDX49-214ENST00000629999 HYPKQ9NX55 129 aa18.51■□□□□ 0.55
DDX49-214ENST00000629999 PI4KAP2A4QPH2 592 aa18.5■□□□□ 0.55
DDX49-214ENST00000629999 AIMP1Q12904 312 aaKnown RBP18.5■□□□□ 0.55
DDX49-214ENST00000629999 PDIA6Q15084 440 aa18.5■□□□□ 0.55
DDX49-214ENST00000629999 PI4KAP1Q8N8J0 262 aa18.5■□□□□ 0.55
DDX49-214ENST00000629999 UBR2Q8IWV8 1755 aa18.5■□□□□ 0.55
DDX49-214ENST00000629999 PXDNLA1KZ92 1463 aa18.49■□□□□ 0.55
DDX49-214ENST00000629999 ASAP1Q9ULH1 1129 aa18.49■□□□□ 0.55
DDX49-214ENST00000629999 ADCY9O60503 1353 aa18.49■□□□□ 0.55
DDX49-214ENST00000629999 DNAAF4Q8WXU2 420 aa18.49■□□□□ 0.55
DDX49-214ENST00000629999 ITGB4P16144 1822 aa18.48■□□□□ 0.55
DDX49-214ENST00000629999 MARCH10Q8NA82 808 aaPredicted RBP18.48■□□□□ 0.55
DDX49-214ENST00000629999 FBXO41Q8TF61 875 aa18.48■□□□□ 0.55
DDX49-214ENST00000629999 LAMB4A4D0S4 1761 aa18.48■□□□□ 0.55
DDX49-214ENST00000629999 DOT1LQ8TEK3 1739 aa18.48■□□□□ 0.55
DDX49-214ENST00000629999 KLHL34Q8N239 644 aa18.47■□□□□ 0.55
DDX49-214ENST00000629999 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
DDX49-214ENST00000629999 ACSBG1Q96GR2 724 aa18.47■□□□□ 0.55
DDX49-214ENST00000629999 MAP3K2Q9Y2U5 619 aa18.47■□□□□ 0.55
DDX49-214ENST00000629999 KAT6BQ8WYB5 2073 aa18.46■□□□□ 0.55
DDX49-214ENST00000629999 BCL9O00512 1426 aa18.46■□□□□ 0.55
DDX49-214ENST00000629999 N4BP2Q86UW6 1770 aaPredicted RBP18.46■□□□□ 0.55
DDX49-214ENST00000629999 SIRT2Q8IXJ6 389 aa18.46■□□□□ 0.55
DDX49-214ENST00000629999 SRCIN1Q9C0H9 1055 aa18.46■□□□□ 0.55
DDX49-214ENST00000629999 ATG3Q9NT62 314 aa18.46■□□□□ 0.55
DDX49-214ENST00000629999 PDZRN3Q9UPQ7 1066 aa18.46■□□□□ 0.55
DDX49-214ENST00000629999 XAGE3Q8WTP9 111 aa18.45■□□□□ 0.54
DDX49-214ENST00000629999 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
DDX49-214ENST00000629999 AFF2P51816 1311 aa18.45■□□□□ 0.54
DDX49-214ENST00000629999 ATP10DQ9P241 1426 aa18.45■□□□□ 0.54
DDX49-214ENST00000629999 DDX58O95786 925 aaKnown RBP18.45■□□□□ 0.54
DDX49-214ENST00000629999 KSR2Q6VAB6 950 aa18.45■□□□□ 0.54
DDX49-214ENST00000629999 BEND3Q5T5X7 828 aa18.44■□□□□ 0.54
DDX49-214ENST00000629999 COPS6Q7L5N1 327 aa18.44■□□□□ 0.54
DDX49-214ENST00000629999 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.44■□□□□ 0.54
DDX49-214ENST00000629999 CEP85Q6P2H3 762 aa18.43■□□□□ 0.54
DDX49-214ENST00000629999 GNAI3P08754 354 aa18.43■□□□□ 0.54
DDX49-214ENST00000629999 RIC3Q7Z5B4 369 aa18.43■□□□□ 0.54
DDX49-214ENST00000629999 SMC5Q8IY18 1101 aa18.43■□□□□ 0.54
DDX49-214ENST00000629999 A1BGP04217 495 aa18.42■□□□□ 0.54
DDX49-214ENST00000629999 GNAI2P04899 355 aa18.42■□□□□ 0.54
DDX49-214ENST00000629999 ANKRD44Q8N8A2 993 aa18.42■□□□□ 0.54
DDX49-214ENST00000629999 NBPF26B4DH59 902 aa18.41■□□□□ 0.54
DDX49-214ENST00000629999 NBPF14Q5TI25 921 aa18.41■□□□□ 0.54
DDX49-214ENST00000629999 NBPF10Q6P3W6 841 aaKnown RBP18.41■□□□□ 0.54
DDX49-214ENST00000629999 LRP10Q7Z4F1 713 aa18.41■□□□□ 0.54
DDX49-214ENST00000629999 NBPF15Q8N660 670 aa18.41■□□□□ 0.54
DDX49-214ENST00000629999 USP44Q9H0E7 712 aa18.41■□□□□ 0.54
DDX49-214ENST00000629999 UBTFL1P0CB47 393 aaPredicted RBP18.41■□□□□ 0.54
DDX49-214ENST00000629999 DNAJC10Q8IXB1 793 aa18.41■□□□□ 0.54
DDX49-214ENST00000629999 RPAP2Q8IXW5 612 aaPredicted RBP18.41■□□□□ 0.54
DDX49-214ENST00000629999 CWF19L2Q2TBE0 894 aaKnown RBP18.4■□□□□ 0.54
DDX49-214ENST00000629999 LRRFIP2Q9Y608 721 aaKnown RBP18.4■□□□□ 0.54
DDX49-214ENST00000629999 ERBB4Q15303 1308 aa18.39■□□□□ 0.54
DDX49-214ENST00000629999 ANKRD13DQ6ZTN6 518 aa18.39■□□□□ 0.53
DDX49-214ENST00000629999 GCC1Q96CN9 775 aa18.39■□□□□ 0.53
DDX49-214ENST00000629999 VSIG10Q8N0Z9 540 aa18.38■□□□□ 0.53
DDX49-214ENST00000629999 GJD4Q96KN9 370 aaPredicted RBP18.38■□□□□ 0.53
DDX49-214ENST00000629999 ZNF330Q9Y3S2 320 aaPredicted RBP18.38■□□□□ 0.53
DDX49-214ENST00000629999 NBPF7P0C2Y1 421 aaPredicted RBP18.37■□□□□ 0.53
DDX49-214ENST00000629999 SLC4A9Q96Q91 983 aa18.37■□□□□ 0.53
DDX49-214ENST00000629999 MYD88Q99836 296 aa18.37■□□□□ 0.53
DDX49-214ENST00000629999 LNPKQ9C0E8 428 aa18.37■□□□□ 0.53
DDX49-214ENST00000629999 KCNQ2O43526 872 aa18.37■□□□□ 0.53
DDX49-214ENST00000629999 ALDH1L1O75891 902 aa18.37■□□□□ 0.53
DDX49-214ENST00000629999 NUCB1Q02818 461 aa18.37■□□□□ 0.53
DDX49-214ENST00000629999 NEXNQ0ZGT2 675 aa18.37■□□□□ 0.53
DDX49-214ENST00000629999 ANKRD45Q5TZF3 282 aa18.37■□□□□ 0.53
DDX49-214ENST00000629999 THSD7AQ9UPZ6 1657 aa18.36■□□□□ 0.53
DDX49-214ENST00000629999 LINS1Q8NG48 757 aa18.36■□□□□ 0.53
DDX49-214ENST00000629999 TEX13AQ9BXU3 409 aaPredicted RBP18.36■□□□□ 0.53
DDX49-214ENST00000629999 C9orf78Q9NZ63 289 aaPredicted RBP18.36■□□□□ 0.53
DDX49-214ENST00000629999 RBM19Q9Y4C8 960 aaKnown RBP18.36■□□□□ 0.53
DDX49-214ENST00000629999 HMMRO75330 724 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms