RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
SPTAN1-219ENST00000629378 UBR2Q8IWV8 1755 aa12.08□□□□□ -0.48
SPTAN1-219ENST00000629378 SENP3-EIF4A1A0A087X0R7 540 aa12.08□□□□□ -0.48
SPTAN1-219ENST00000629378 KCNQ3O43525 872 aa12.08□□□□□ -0.48
SPTAN1-219ENST00000629378 ZPR1O75312 459 aa12.08□□□□□ -0.48
SPTAN1-219ENST00000629378 CANXP27824 592 aaKnown RBP12.08□□□□□ -0.48
SPTAN1-219ENST00000629378 PRKAR2BP31323 418 aa12.08□□□□□ -0.48
SPTAN1-219ENST00000629378 RSPH6AQ9H0K4 717 aa12.08□□□□□ -0.48
SPTAN1-219ENST00000629378 BRCA1P38398 1863 aaKnown RBP12.08□□□□□ -0.48
SPTAN1-219ENST00000629378 SIPA1L3O60292 1781 aaPredicted RBP12.07□□□□□ -0.48
SPTAN1-219ENST00000629378 POLRMTO00411 1230 aaKnown RBP12.07□□□□□ -0.48
SPTAN1-219ENST00000629378 FCHSD2O94868 740 aa12.07□□□□□ -0.48
SPTAN1-219ENST00000629378 CHRNA5P30532 468 aa12.07□□□□□ -0.48
SPTAN1-219ENST00000629378 ARHGAP27Q6ZUM4 889 aa12.07□□□□□ -0.48
SPTAN1-219ENST00000629378 GAS2L2Q8NHY3 880 aa12.07□□□□□ -0.48
SPTAN1-219ENST00000629378 ZNF496Q96IT1 587 aaPredicted RBP12.07□□□□□ -0.48
SPTAN1-219ENST00000629378 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
SPTAN1-219ENST00000629378 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
SPTAN1-219ENST00000629378 ADCY9O60503 1353 aa12.06□□□□□ -0.48
SPTAN1-219ENST00000629378 U2AF1L5P0DN76 240 aaPredicted RBP12.06□□□□□ -0.48
SPTAN1-219ENST00000629378 U2AF1Q01081 240 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPTAN1-219ENST00000629378 TEFQ10587 303 aa12.06□□□□□ -0.48
SPTAN1-219ENST00000629378 NFIXQ14938 502 aa12.06□□□□□ -0.48
SPTAN1-219ENST00000629378 TTC5Q8N0Z6 440 aa12.06□□□□□ -0.48
SPTAN1-219ENST00000629378 VSIG10Q8N0Z9 540 aa12.06□□□□□ -0.48
SPTAN1-219ENST00000629378 CFAP53Q96M91 514 aa12.06□□□□□ -0.48
SPTAN1-219ENST00000629378 NARFQ9UHQ1 456 aa12.06□□□□□ -0.48
SPTAN1-219ENST00000629378 RALBP1Q15311 655 aa12.05□□□□□ -0.48
SPTAN1-219ENST00000629378 ZNF790Q6PG37 636 aa12.05□□□□□ -0.48
SPTAN1-219ENST00000629378 GPBP1L1Q9HC44 474 aaPredicted RBP12.05□□□□□ -0.48
SPTAN1-219ENST00000629378 COL15A1P39059 1388 aa12.05□□□□□ -0.48
SPTAN1-219ENST00000629378 PRAMEF22A3QJZ6 481 aa12.04□□□□□ -0.48
SPTAN1-219ENST00000629378 A1BGP04217 495 aa12.04□□□□□ -0.48
SPTAN1-219ENST00000629378 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
SPTAN1-219ENST00000629378 DCTN1Q14203 1278 aa12.04□□□□□ -0.48
SPTAN1-219ENST00000629378 BICDL1Q6ZP65 573 aa12.04□□□□□ -0.48
SPTAN1-219ENST00000629378 MCM10Q7L590 875 aa12.04□□□□□ -0.48
SPTAN1-219ENST00000629378 PIM2Q9P1W9 311 aa12.04□□□□□ -0.48
SPTAN1-219ENST00000629378 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
SPTAN1-219ENST00000629378 HEG1Q9ULI3 1381 aa12.04□□□□□ -0.48
SPTAN1-219ENST00000629378 ARFGEF1Q9Y6D6 1849 aa12.03□□□□□ -0.48
SPTAN1-219ENST00000629378 BTBD11A6QL63 1104 aa12.03□□□□□ -0.48
SPTAN1-219ENST00000629378 STARD3NLO95772 234 aa12.03□□□□□ -0.48
SPTAN1-219ENST00000629378 SERPINB2P05120 415 aa12.03□□□□□ -0.48
SPTAN1-219ENST00000629378 PIP4K2AP48426 406 aaPredicted RBP12.03□□□□□ -0.48
SPTAN1-219ENST00000629378 CCDC184Q52MB2 194 aa12.03□□□□□ -0.48
SPTAN1-219ENST00000629378 TBC1D2BQ9UPU7 963 aa12.03□□□□□ -0.48
SPTAN1-219ENST00000629378 NUDCQ9Y266 331 aa12.03□□□□□ -0.48
SPTAN1-219ENST00000629378 CEMIPQ8WUJ3 1361 aa12.03□□□□□ -0.48
SPTAN1-219ENST00000629378 DALRD3Q5D0E6 543 aaKnown RBP12.02□□□□□ -0.49
SPTAN1-219ENST00000629378 CCDC24Q8N4L8 307 aa12.02□□□□□ -0.49
SPTAN1-219ENST00000629378 MRS2Q9HD23 443 aa12.02□□□□□ -0.49
SPTAN1-219ENST00000629378 USP16Q9Y5T5 823 aa12.02□□□□□ -0.49
SPTAN1-219ENST00000629378 CENPBP07199 599 aaPredicted RBP12.01□□□□□ -0.49
SPTAN1-219ENST00000629378 TBC1D9BQ66K14 1250 aa12.01□□□□□ -0.49
SPTAN1-219ENST00000629378 FMNL2Q96PY5 1086 aa12.01□□□□□ -0.49
SPTAN1-219ENST00000629378 MIS18AQ9NYP9 233 aa12.01□□□□□ -0.49
SPTAN1-219ENST00000629378 MYBBP1AQ9BQG0 1328 aaKnown RBP12.01□□□□□ -0.49
SPTAN1-219ENST00000629378 NRXN2Q9P2S2 1712 aa12□□□□□ -0.49
SPTAN1-219ENST00000629378 SBF1O95248 1867 aa12□□□□□ -0.49
SPTAN1-219ENST00000629378 DLG5Q8TDM6 1919 aa12□□□□□ -0.49
SPTAN1-219ENST00000629378 KIF3CO14782 793 aa12□□□□□ -0.49
SPTAN1-219ENST00000629378 C9orf131Q5VYM1 1079 aa12□□□□□ -0.49
SPTAN1-219ENST00000629378 TEX13AQ9BXU3 409 aaPredicted RBP12□□□□□ -0.49
SPTAN1-219ENST00000629378 CARMIL3Q8ND23 1372 aa12□□□□□ -0.49
SPTAN1-219ENST00000629378 RTF1Q92541 710 aaKnown RBP11.99□□□□□ -0.49
SPTAN1-219ENST00000629378 ANKRD31Q8N7Z5 1873 aa11.98□□□□□ -0.49
SPTAN1-219ENST00000629378 A0A087WZG4 1122 aa11.98□□□□□ -0.49
SPTAN1-219ENST00000629378 IL6STP40189 918 aaPredicted RBP11.98□□□□□ -0.49
SPTAN1-219ENST00000629378 C2CD5Q86YS7 1000 aa11.98□□□□□ -0.49
SPTAN1-219ENST00000629378 NMRK2Q9NPI5 230 aa11.98□□□□□ -0.49
SPTAN1-219ENST00000629378 CCDC88AQ3V6T2 1871 aa11.97□□□□□ -0.49
SPTAN1-219ENST00000629378 CAMTA2O94983 1202 aa11.97□□□□□ -0.49
SPTAN1-219ENST00000629378 PRELPP51888 382 aa11.97□□□□□ -0.49
SPTAN1-219ENST00000629378 RASSF7Q02833 373 aa11.97□□□□□ -0.49
SPTAN1-219ENST00000629378 DLEC1Q9Y238 1755 aa11.97□□□□□ -0.49
SPTAN1-219ENST00000629378 CEP350Q5VT06 3117 aa11.96□□□□□ -0.49
SPTAN1-219ENST00000629378 NBPF26B4DH59 902 aa11.96□□□□□ -0.49
SPTAN1-219ENST00000629378 TAF7Q15545 349 aaPredicted RBP11.96□□□□□ -0.49
SPTAN1-219ENST00000629378 NBPF10Q6P3W6 841 aaKnown RBP11.96□□□□□ -0.49
SPTAN1-219ENST00000629378 DZIP3Q86Y13 1208 aaKnown RBP11.96□□□□□ -0.49
SPTAN1-219ENST00000629378 NBPF15Q8N660 670 aa11.96□□□□□ -0.49
SPTAN1-219ENST00000629378 PLEKHF1Q96S99 279 aa11.96□□□□□ -0.49
SPTAN1-219ENST00000629378 THUMPD2Q9BTF0 503 aaKnown RBP11.96□□□□□ -0.49
SPTAN1-219ENST00000629378 RNF181Q9P0P0 153 aa11.96□□□□□ -0.49
SPTAN1-219ENST00000629378 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
SPTAN1-219ENST00000629378 SCN7AQ01118 1682 aa11.96□□□□□ -0.5
SPTAN1-219ENST00000629378 H0YIN7 160 aa11.95□□□□□ -0.5
SPTAN1-219ENST00000629378 HTATSF1O43719 755 aaKnown RBP11.95□□□□□ -0.5
SPTAN1-219ENST00000629378 SNRPA1P09661 255 aaKnown RBP11.95□□□□□ -0.5
SPTAN1-219ENST00000629378 PRR5LQ6MZQ0 368 aa11.95□□□□□ -0.5
SPTAN1-219ENST00000629378 FAM9BQ8IZU0 186 aa11.95□□□□□ -0.5
SPTAN1-219ENST00000629378 ZNF622Q969S3 477 aaKnown RBP eCLIP11.95□□□□□ -0.5
SPTAN1-219ENST00000629378 CACNA1SQ13698 1873 aa11.94□□□□□ -0.5
SPTAN1-219ENST00000629378 TTLL6Q8N841 843 aa11.94□□□□□ -0.5
SPTAN1-219ENST00000629378 SETDB2Q96T68 719 aa11.94□□□□□ -0.5
SPTAN1-219ENST00000629378 BCORQ6W2J9 1755 aa11.94□□□□□ -0.5
SPTAN1-219ENST00000629378 COL11A2P13942 1736 aaPredicted RBP11.94□□□□□ -0.5
SPTAN1-219ENST00000629378 HSPA6P17066 643 aa11.93□□□□□ -0.5
SPTAN1-219ENST00000629378 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms