RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 ERFEQ4G0M1 354 aa10.28□□□□□ -0.76
TCF4-266ENST00000628689 TAF1DQ9H5J8 278 aaPredicted RBP10.28□□□□□ -0.76
TCF4-266ENST00000628689 CYP27B1O15528 508 aa10.27□□□□□ -0.77
TCF4-266ENST00000628689 ASAP1Q9ULH1 1129 aa10.27□□□□□ -0.77
TCF4-266ENST00000628689 CGNL1Q0VF96 1302 aa10.27□□□□□ -0.77
TCF4-266ENST00000628689 THSD7BQ9C0I4 1608 aa10.26□□□□□ -0.77
TCF4-266ENST00000628689 ECE1P42892 770 aa10.26□□□□□ -0.77
TCF4-266ENST00000628689 GRM1Q13255 1194 aa10.26□□□□□ -0.77
TCF4-266ENST00000628689 NBPF6Q5VWK0 638 aa10.26□□□□□ -0.77
TCF4-266ENST00000628689 CYP4F22Q6NT55 531 aa10.26□□□□□ -0.77
TCF4-266ENST00000628689 MIER1Q8N108 512 aa10.26□□□□□ -0.77
TCF4-266ENST00000628689 CNTROBQ8N137 903 aa10.26□□□□□ -0.77
TCF4-266ENST00000628689 NBPF4Q96M43 638 aa10.26□□□□□ -0.77
TCF4-266ENST00000628689 LTBP1Q14766 1721 aa10.26□□□□□ -0.77
TCF4-266ENST00000628689 IQCA1LA6NCM1 817 aa10.25□□□□□ -0.77
TCF4-266ENST00000628689 EAPPQ56P03 285 aaPredicted RBP10.25□□□□□ -0.77
TCF4-266ENST00000628689 PAXIP1Q6ZW49 1069 aaPredicted RBP10.25□□□□□ -0.77
TCF4-266ENST00000628689 PIP4P2Q8N4L2 257 aa10.25□□□□□ -0.77
TCF4-266ENST00000628689 USHBP1Q8N6Y0 703 aa10.25□□□□□ -0.77
TCF4-266ENST00000628689 TTLL6Q8N841 843 aa10.25□□□□□ -0.77
TCF4-266ENST00000628689 RAPGEF4Q8WZA2 1011 aa10.25□□□□□ -0.77
TCF4-266ENST00000628689 PCDH11XQ9BZA7 1347 aa10.25□□□□□ -0.77
TCF4-266ENST00000628689 PCDH11YQ9BZA8 1340 aa10.25□□□□□ -0.77
TCF4-266ENST00000628689 A0A0C4DFX4 3053 aa10.25□□□□□ -0.77
TCF4-266ENST00000628689 CD163L1Q9NR16 1453 aa10.24□□□□□ -0.77
TCF4-266ENST00000628689 SCN4AP35499 1836 aa10.24□□□□□ -0.77
TCF4-266ENST00000628689 CA12O43570 354 aa10.24□□□□□ -0.77
TCF4-266ENST00000628689 AOC2O75106 756 aa10.24□□□□□ -0.77
TCF4-266ENST00000628689 RPS6KA4O75676 772 aa10.24□□□□□ -0.77
TCF4-266ENST00000628689 HOXC9P31274 260 aa10.24□□□□□ -0.77
TCF4-266ENST00000628689 MAP2K2P36507 400 aa10.24□□□□□ -0.77
TCF4-266ENST00000628689 FXR1P51114 621 aaKnown RBP eCLIP10.24□□□□□ -0.77
TCF4-266ENST00000628689 RC3H1Q5TC82 1133 aaKnown RBP10.24□□□□□ -0.77
TCF4-266ENST00000628689 MAP1SQ66K74 1059 aaPredicted RBP10.24□□□□□ -0.77
TCF4-266ENST00000628689 SRP68Q9UHB9 627 aaKnown RBP10.24□□□□□ -0.77
TCF4-266ENST00000628689 MYH14Q7Z406 1995 aaKnown RBP10.24□□□□□ -0.77
TCF4-266ENST00000628689 EVC2Q86UK5 1308 aa10.24□□□□□ -0.77
TCF4-266ENST00000628689 POLRMTO00411 1230 aaKnown RBP10.23□□□□□ -0.77
TCF4-266ENST00000628689 TATP17735 454 aaPredicted RBP10.23□□□□□ -0.77
TCF4-266ENST00000628689 PLCD3Q8N3E9 789 aa10.23□□□□□ -0.77
TCF4-266ENST00000628689 L3MBTL3Q96JM7 780 aaPredicted RBP10.23□□□□□ -0.77
TCF4-266ENST00000628689 SLC4A9Q96Q91 983 aa10.23□□□□□ -0.77
TCF4-266ENST00000628689 ATG3Q9NT62 314 aa10.23□□□□□ -0.77
TCF4-266ENST00000628689 TRIOBPQ9H2D6 2365 aa10.23□□□□□ -0.77
TCF4-266ENST00000628689 FBLN1P23142 703 aa10.22□□□□□ -0.77
TCF4-266ENST00000628689 TM4SF1P30408 202 aa10.22□□□□□ -0.77
TCF4-266ENST00000628689 NBPF15Q8N660 670 aa10.22□□□□□ -0.77
TCF4-266ENST00000628689 DDX21Q9NR30 783 aaKnown RBP eCLIP10.22□□□□□ -0.77
TCF4-266ENST00000628689 MAP3K19Q56UN5 1328 aa10.22□□□□□ -0.77
TCF4-266ENST00000628689 SBNO2Q9Y2G9 1366 aa10.22□□□□□ -0.77
TCF4-266ENST00000628689 MON2Q7Z3U7 1717 aa10.21□□□□□ -0.77
TCF4-266ENST00000628689 FMR1Q06787 632 aaKnown RBP eCLIP10.21□□□□□ -0.77
TCF4-266ENST00000628689 NKX1-1Q15270 411 aaPredicted RBP10.21□□□□□ -0.77
TCF4-266ENST00000628689 ADAMTSL1Q8N6G6 1762 aa10.21□□□□□ -0.78
TCF4-266ENST00000628689 AMPHP49418 695 aa10.2□□□□□ -0.78
TCF4-266ENST00000628689 FER1L6Q2WGJ9 1857 aa10.2□□□□□ -0.78
TCF4-266ENST00000628689 TMOD3Q9NYL9 352 aa10.2□□□□□ -0.78
TCF4-266ENST00000628689 CNTNAP4Q9C0A0 1308 aa10.19□□□□□ -0.78
TCF4-266ENST00000628689 USP42Q9H9J4 1324 aaKnown RBP10.19□□□□□ -0.78
TCF4-266ENST00000628689 C21orf2O43822 256 aa10.19□□□□□ -0.78
TCF4-266ENST00000628689 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
TCF4-266ENST00000628689 EPHX2P34913 555 aa10.19□□□□□ -0.78
TCF4-266ENST00000628689 CST9Q5W186 159 aa10.19□□□□□ -0.78
TCF4-266ENST00000628689 C2CD5Q86YS7 1000 aa10.19□□□□□ -0.78
TCF4-266ENST00000628689 IFNLR1Q8IU57 520 aaPredicted RBP10.19□□□□□ -0.78
TCF4-266ENST00000628689 HACL1Q9UJ83 578 aa10.19□□□□□ -0.78
TCF4-266ENST00000628689 DLEC1Q9Y238 1755 aa10.19□□□□□ -0.78
TCF4-266ENST00000628689 CEP290O15078 2479 aa10.18□□□□□ -0.78
TCF4-266ENST00000628689 KDRP35968 1356 aa10.18□□□□□ -0.78
TCF4-266ENST00000628689 TLL2Q9Y6L7 1015 aa10.18□□□□□ -0.78
TCF4-266ENST00000628689 AFDNP55196 1824 aaKnown RBP10.18□□□□□ -0.78
TCF4-266ENST00000628689 SZT2Q5T011 3432 aa10.17□□□□□ -0.78
TCF4-266ENST00000628689 LTBP3Q9NS15 1303 aa10.17□□□□□ -0.78
TCF4-266ENST00000628689 H0YIN7 160 aa10.17□□□□□ -0.78
TCF4-266ENST00000628689 BRPF1P55201 1214 aaPredicted RBP10.17□□□□□ -0.78
TCF4-266ENST00000628689 CIAPIN1Q6FI81 312 aa10.17□□□□□ -0.78
TCF4-266ENST00000628689 PNMA8AQ86V59 439 aaPredicted RBP10.17□□□□□ -0.78
TCF4-266ENST00000628689 SLC17A8Q8NDX2 589 aa10.17□□□□□ -0.78
TCF4-266ENST00000628689 TAOK3Q9H2K8 898 aa10.17□□□□□ -0.78
TCF4-266ENST00000628689 TRPM7Q96QT4 1865 aa10.17□□□□□ -0.78
TCF4-266ENST00000628689 SMG6Q86US8 1419 aaKnown RBP10.16□□□□□ -0.78
TCF4-266ENST00000628689 MNX1P50219 401 aaPredicted RBP10.16□□□□□ -0.78
TCF4-266ENST00000628689 COL5A3P25940 1745 aaPredicted RBP10.16□□□□□ -0.78
TCF4-266ENST00000628689 NFIXQ14938 502 aa10.15□□□□□ -0.78
TCF4-266ENST00000628689 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
TCF4-266ENST00000628689 MKI67P46013 3256 aaKnown RBP10.15□□□□□ -0.79
TCF4-266ENST00000628689 ZNF541Q9H0D2 1346 aa10.14□□□□□ -0.79
TCF4-266ENST00000628689 TRAF5O00463 557 aa10.14□□□□□ -0.79
TCF4-266ENST00000628689 ZNF622Q969S3 477 aaKnown RBP eCLIP10.14□□□□□ -0.79
TCF4-266ENST00000628689 ZIC5Q96T25 663 aa10.14□□□□□ -0.79
TCF4-266ENST00000628689 ADAMTS7Q9UKP4 1686 aa10.14□□□□□ -0.79
TCF4-266ENST00000628689 RNF123Q5XPI4 1314 aa10.13□□□□□ -0.79
TCF4-266ENST00000628689 ZNF831Q5JPB2 1677 aa10.13□□□□□ -0.79
TCF4-266ENST00000628689 KIAA0100Q14667 2235 aaKnown RBP10.13□□□□□ -0.79
TCF4-266ENST00000628689 SERPINB2P05120 415 aa10.13□□□□□ -0.79
TCF4-266ENST00000628689 USPL1Q5W0Q7 1092 aa10.13□□□□□ -0.79
TCF4-266ENST00000628689 SAPCD2Q86UD0 394 aa10.13□□□□□ -0.79
TCF4-266ENST00000628689 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
TCF4-266ENST00000628689 NRXN2Q9P2S2 1712 aa10.13□□□□□ -0.79
TCF4-266ENST00000628689 CARMIL3Q8ND23 1372 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms