RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 PRIM1P49642 420 aaKnown RBP31.59■■■□□ 2.65
CAPNS1-215ENST00000628018 INTS3Q68E01 1043 aaKnown RBP31.59■■■□□ 2.65
CAPNS1-215ENST00000628018 PHAXQ9H814 394 aaKnown RBP31.59■■■□□ 2.65
CAPNS1-215ENST00000628018 ASAP1Q9ULH1 1129 aa31.59■■■□□ 2.65
CAPNS1-215ENST00000628018 QTRT2Q9H974 415 aaKnown RBP31.59■■■□□ 2.65
CAPNS1-215ENST00000628018 USP16Q9Y5T5 823 aa31.59■■■□□ 2.65
CAPNS1-215ENST00000628018 FKBP5Q13451 457 aaPredicted RBP31.58■■■□□ 2.65
CAPNS1-215ENST00000628018 DDX21Q9NR30 783 aaKnown RBP eCLIP31.58■■■□□ 2.65
CAPNS1-215ENST00000628018 A0A0G2JS52 829 aa31.57■■■□□ 2.64
CAPNS1-215ENST00000628018 MYT1Q01538 1121 aa31.57■■■□□ 2.64
CAPNS1-215ENST00000628018 PDIA6Q15084 440 aa31.57■■■□□ 2.64
CAPNS1-215ENST00000628018 SYTL4Q96C24 671 aaPredicted RBP31.57■■■□□ 2.64
CAPNS1-215ENST00000628018 PTCD1O75127 700 aaKnown RBP31.56■■■□□ 2.64
CAPNS1-215ENST00000628018 ANXA1P04083 346 aa31.55■■■□□ 2.64
CAPNS1-215ENST00000628018 PROSER3Q2NL68 480 aa31.55■■■□□ 2.64
CAPNS1-215ENST00000628018 HYPKQ9NX55 129 aa31.55■■■□□ 2.64
CAPNS1-215ENST00000628018 ZBTB7BO15156 539 aaPredicted RBP31.54■■■□□ 2.64
CAPNS1-215ENST00000628018 ZBTB40Q9NUA8 1239 aa31.54■■■□□ 2.64
CAPNS1-215ENST00000628018 F6X3S4 739 aa31.54■■■□□ 2.64
CAPNS1-215ENST00000628018 CHMP4BQ9H444 224 aaKnown RBP31.54■■■□□ 2.64
CAPNS1-215ENST00000628018 KAT6BQ8WYB5 2073 aa31.53■■■□□ 2.64
CAPNS1-215ENST00000628018 VSIG10Q8N0Z9 540 aa31.53■■■□□ 2.64
CAPNS1-215ENST00000628018 ACSBG1Q96GR2 724 aa31.53■■■□□ 2.64
CAPNS1-215ENST00000628018 PXDNLA1KZ92 1463 aa31.52■■■□□ 2.64
CAPNS1-215ENST00000628018 N4BP2Q86UW6 1770 aaPredicted RBP31.51■■■□□ 2.63
CAPNS1-215ENST00000628018 ERBB4Q15303 1308 aa31.5■■■□□ 2.63
CAPNS1-215ENST00000628018 CCT4P50991 539 aaKnown RBP31.49■■■□□ 2.63
CAPNS1-215ENST00000628018 PCDHB15Q9Y5E8 787 aa31.49■■■□□ 2.63
CAPNS1-215ENST00000628018 LRP10Q7Z4F1 713 aa31.49■■■□□ 2.63
CAPNS1-215ENST00000628018 KDM2BQ8NHM5 1336 aa31.48■■■□□ 2.63
CAPNS1-215ENST00000628018 SLC4A10Q6U841 1118 aa31.48■■■□□ 2.63
CAPNS1-215ENST00000628018 SEPT12Q8IYM1 358 aa31.48■■■□□ 2.63
CAPNS1-215ENST00000628018 TEX13AQ9BXU3 409 aaPredicted RBP31.48■■■□□ 2.63
CAPNS1-215ENST00000628018 ZNF772Q68DY9 489 aaPredicted RBP31.46■■■□□ 2.63
CAPNS1-215ENST00000628018 RBM42Q9BTD8 480 aaKnown RBP31.46■■■□□ 2.63
CAPNS1-215ENST00000628018 MYL6BP14649 208 aa31.45■■■□□ 2.63
CAPNS1-215ENST00000628018 ADCY9O60503 1353 aa31.45■■■□□ 2.63
CAPNS1-215ENST00000628018 PI4KAP2A4QPH2 592 aa31.44■■■□□ 2.62
CAPNS1-215ENST00000628018 KCNQ2O43526 872 aa31.44■■■□□ 2.62
CAPNS1-215ENST00000628018 PI4KAP1Q8N8J0 262 aa31.44■■■□□ 2.62
CAPNS1-215ENST00000628018 SLC4A9Q96Q91 983 aa31.44■■■□□ 2.62
CAPNS1-215ENST00000628018 KSR2Q6VAB6 950 aa31.43■■■□□ 2.62
CAPNS1-215ENST00000628018 CENPQQ7L2Z9 268 aaPredicted RBP31.43■■■□□ 2.62
CAPNS1-215ENST00000628018 DNAJC10Q8IXB1 793 aa31.43■■■□□ 2.62
CAPNS1-215ENST00000628018 DNAAF4Q8WXU2 420 aa31.43■■■□□ 2.62
CAPNS1-215ENST00000628018 NBPF26B4DH59 902 aa31.42■■■□□ 2.62
CAPNS1-215ENST00000628018 IGHDP01880 384 aa31.42■■■□□ 2.62
CAPNS1-215ENST00000628018 NBPF14Q5TI25 921 aa31.42■■■□□ 2.62
CAPNS1-215ENST00000628018 NBPF10Q6P3W6 841 aaKnown RBP31.42■■■□□ 2.62
CAPNS1-215ENST00000628018 NBPF15Q8N660 670 aa31.42■■■□□ 2.62
CAPNS1-215ENST00000628018 NHSQ6T4R5 1651 aa31.41■■■□□ 2.62
CAPNS1-215ENST00000628018 DDX58O95786 925 aaKnown RBP31.41■■■□□ 2.62
CAPNS1-215ENST00000628018 PIP4K2AP48426 406 aaPredicted RBP31.41■■■□□ 2.62
CAPNS1-215ENST00000628018 TJP1Q07157 1748 aa31.41■■■□□ 2.62
CAPNS1-215ENST00000628018 ATP10DQ9P241 1426 aa31.4■■■□□ 2.62
CAPNS1-215ENST00000628018 A1BGP04217 495 aa31.4■■■□□ 2.62
CAPNS1-215ENST00000628018 COPS6Q7L5N1 327 aa31.4■■■□□ 2.62
CAPNS1-215ENST00000628018 XAGE3Q8WTP9 111 aa31.4■■■□□ 2.62
CAPNS1-215ENST00000628018 AIMP1Q12904 312 aaKnown RBP31.39■■■□□ 2.62
CAPNS1-215ENST00000628018 SMARCC1Q92922 1105 aaPredicted RBP31.39■■■□□ 2.61
CAPNS1-215ENST00000628018 MAP3K2Q9Y2U5 619 aa31.39■■■□□ 2.61
CAPNS1-215ENST00000628018 CICQ96RK0 1608 aaPredicted RBP31.38■■■□□ 2.61
CAPNS1-215ENST00000628018 STARD3NLO95772 234 aa31.38■■■□□ 2.61
CAPNS1-215ENST00000628018 BEND3Q5T5X7 828 aa31.38■■■□□ 2.61
CAPNS1-215ENST00000628018 RBM6P78332 1123 aaKnown RBP31.37■■■□□ 2.61
CAPNS1-215ENST00000628018 FAM182BQ5T319 152 aa31.37■■■□□ 2.61
CAPNS1-215ENST00000628018 MEIS3Q99687 375 aa31.37■■■□□ 2.61
CAPNS1-215ENST00000628018 PALLDQ8WX93 1383 aa31.37■■■□□ 2.61
CAPNS1-215ENST00000628018 SRCIN1Q9C0H9 1055 aa31.36■■■□□ 2.61
CAPNS1-215ENST00000628018 RWDD1Q9H446 243 aaPredicted RBP31.36■■■□□ 2.61
CAPNS1-215ENST00000628018 SBF2Q86WG5 1849 aa31.35■■■□□ 2.61
CAPNS1-215ENST00000628018 BRWD3Q6RI45 1802 aa31.35■■■□□ 2.61
CAPNS1-215ENST00000628018 CYP19A1P11511 503 aaPredicted RBP31.34■■■□□ 2.61
CAPNS1-215ENST00000628018 HDAC1Q13547 482 aaPredicted RBP31.34■■■□□ 2.61
CAPNS1-215ENST00000628018 C1orf115Q9H7X2 142 aa31.34■■■□□ 2.61
CAPNS1-215ENST00000628018 ZNF831Q5JPB2 1677 aa31.34■■■□□ 2.61
CAPNS1-215ENST00000628018 LOC102724428A0A0B4J2F2 783 aa31.34■■■□□ 2.61
CAPNS1-215ENST00000628018 SIK1P57059 783 aa31.34■■■□□ 2.61
CAPNS1-215ENST00000628018 ANKRD13DQ6ZTN6 518 aa31.34■■■□□ 2.61
CAPNS1-215ENST00000628018 RIC3Q7Z5B4 369 aa31.33■■■□□ 2.61
CAPNS1-215ENST00000628018 BTAF1O14981 1849 aa31.33■■■□□ 2.61
CAPNS1-215ENST00000628018 PTF1AQ7RTS3 328 aa31.32■■■□□ 2.6
CAPNS1-215ENST00000628018 PELP1Q8IZL8 1130 aaKnown RBP31.32■■■□□ 2.6
CAPNS1-215ENST00000628018 GNAI3P08754 354 aa31.3■■■□□ 2.6
CAPNS1-215ENST00000628018 USP44Q9H0E7 712 aa31.3■■■□□ 2.6
CAPNS1-215ENST00000628018 ARFGEF2Q9Y6D5 1785 aa31.3■■■□□ 2.6
CAPNS1-215ENST00000628018 ALDH1L1O75891 902 aa31.29■■■□□ 2.6
CAPNS1-215ENST00000628018 ATP6V1AP38606 617 aa31.29■■■□□ 2.6
CAPNS1-215ENST00000628018 KRT27Q7Z3Y8 459 aa31.29■■■□□ 2.6
CAPNS1-215ENST00000628018 PLBD2Q8NHP8 589 aa31.29■■■□□ 2.6
CAPNS1-215ENST00000628018 LINS1Q8NG48 757 aa31.29■■■□□ 2.6
CAPNS1-215ENST00000628018 METTL22Q9BUU2 404 aaPredicted RBP31.29■■■□□ 2.6
CAPNS1-215ENST00000628018 IBTKQ9P2D0 1353 aaPredicted RBP31.27■■■□□ 2.6
CAPNS1-215ENST00000628018 NUP188Q5SRE5 1749 aa31.27■■■□□ 2.6
CAPNS1-215ENST00000628018 TTLL7Q6ZT98 887 aa31.27■■■□□ 2.6
CAPNS1-215ENST00000628018 ITPK1Q13572 414 aa31.26■■■□□ 2.59
CAPNS1-215ENST00000628018 SIRT2Q8IXJ6 389 aa31.26■■■□□ 2.59
CAPNS1-215ENST00000628018 RREB1Q92766 1687 aa31.25■■■□□ 2.59
CAPNS1-215ENST00000628018 GNAI2P04899 355 aa31.25■■■□□ 2.59
CAPNS1-215ENST00000628018 RPAP2Q8IXW5 612 aaPredicted RBP31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms