RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 FCHSD2O94868 740 aa34.22■■■■□ 3.07
TCF4-259ENST00000627568 GIGYF1O75420 1035 aaPredicted RBP34.21■■■■□ 3.07
TCF4-259ENST00000627568 ZNF496Q96IT1 587 aaPredicted RBP34.21■■■■□ 3.07
TCF4-259ENST00000627568 HEG1Q9ULI3 1381 aa34.21■■■■□ 3.07
TCF4-259ENST00000627568 DDR1Q08345 913 aa34.2■■■■□ 3.07
TCF4-259ENST00000627568 RTF1Q92541 710 aaKnown RBP34.2■■■■□ 3.07
TCF4-259ENST00000627568 NARFQ9UHQ1 456 aa34.2■■■■□ 3.07
TCF4-259ENST00000627568 BCS1LQ9Y276 419 aa34.2■■■■□ 3.07
TCF4-259ENST00000627568 ATP10DQ9P241 1426 aa34.2■■■■□ 3.06
TCF4-259ENST00000627568 DPEP1P16444 411 aa34.19■■■■□ 3.06
TCF4-259ENST00000627568 CANXP27824 592 aaKnown RBP34.19■■■■□ 3.06
TCF4-259ENST00000627568 TEX13AQ9BXU3 409 aaPredicted RBP34.19■■■■□ 3.06
TCF4-259ENST00000627568 FMNL2Q96PY5 1086 aa34.18■■■■□ 3.06
TCF4-259ENST00000627568 BTBD11A6QL63 1104 aa34.17■■■■□ 3.06
TCF4-259ENST00000627568 POLRMTO00411 1230 aaKnown RBP34.17■■■■□ 3.06
TCF4-259ENST00000627568 BRCA1P38398 1863 aaKnown RBP34.17■■■■□ 3.06
TCF4-259ENST00000627568 ADCY9O60503 1353 aa34.15■■■■□ 3.06
TCF4-259ENST00000627568 TM4SF1P30408 202 aa34.15■■■■□ 3.06
TCF4-259ENST00000627568 C1QTNF8P60827 252 aa34.15■■■■□ 3.06
TCF4-259ENST00000627568 NEFMP07197 916 aa34.14■■■■□ 3.06
TCF4-259ENST00000627568 A0A087WZG4 1122 aa34.13■■■■□ 3.05
TCF4-259ENST00000627568 EIF5P55010 431 aaKnown RBP34.11■■■■□ 3.05
TCF4-259ENST00000627568 NFIXQ14938 502 aa34.11■■■■□ 3.05
TCF4-259ENST00000627568 GPBP1L1Q9HC44 474 aaPredicted RBP34.11■■■■□ 3.05
TCF4-259ENST00000627568 PIM2Q9P1W9 311 aa34.11■■■■□ 3.05
TCF4-259ENST00000627568 AFDNP55196 1824 aaKnown RBP34.1■■■■□ 3.05
TCF4-259ENST00000627568 MCM10Q7L590 875 aa34.1■■■■□ 3.05
TCF4-259ENST00000627568 NPM2Q86SE8 214 aaKnown RBP34.1■■■■□ 3.05
TCF4-259ENST00000627568 ZNF330Q9Y3S2 320 aaPredicted RBP34.1■■■■□ 3.05
TCF4-259ENST00000627568 ARFGEF1Q9Y6D6 1849 aa34.09■■■■□ 3.05
TCF4-259ENST00000627568 HTATSF1O43719 755 aaKnown RBP34.09■■■■□ 3.05
TCF4-259ENST00000627568 BCL2L12Q9HB09 334 aa34.08■■■■□ 3.05
TCF4-259ENST00000627568 KCNA3P22001 575 aa34.07■■■■□ 3.04
TCF4-259ENST00000627568 KCNQ3O43525 872 aa34.06■■■■□ 3.04
TCF4-259ENST00000627568 IL6STP40189 918 aaPredicted RBP34.06■■■■□ 3.04
TCF4-259ENST00000627568 ARHGAP27Q6ZUM4 889 aa34.06■■■■□ 3.04
TCF4-259ENST00000627568 NRXN2Q9P2S2 1712 aa34.06■■■■□ 3.04
TCF4-259ENST00000627568 SCN7AQ01118 1682 aa34.06■■■■□ 3.04
TCF4-259ENST00000627568 DALRD3Q5D0E6 543 aaKnown RBP34.05■■■■□ 3.04
TCF4-259ENST00000627568 ZNF526Q8TF50 670 aaPredicted RBP34.05■■■■□ 3.04
TCF4-259ENST00000627568 SERPINB2P05120 415 aa34.03■■■■□ 3.04
TCF4-259ENST00000627568 CHRNA5P30532 468 aa34.03■■■■□ 3.04
TCF4-259ENST00000627568 DCTN1Q14203 1278 aa34.03■■■■□ 3.04
TCF4-259ENST00000627568 SENP3-EIF4A1A0A087X0R7 540 aa34.02■■■■□ 3.04
TCF4-259ENST00000627568 A1BGP04217 495 aa34.02■■■■□ 3.04
TCF4-259ENST00000627568 BICDL1Q6ZP65 573 aa34.02■■■■□ 3.04
TCF4-259ENST00000627568 DLG5Q8TDM6 1919 aa34.01■■■■□ 3.04
TCF4-259ENST00000627568 SNRPA1P09661 255 aaKnown RBP34■■■■□ 3.03
TCF4-259ENST00000627568 PNNQ9H307 717 aaKnown RBP34■■■■□ 3.03
TCF4-259ENST00000627568 TBC1D2BQ9UPU7 963 aa34■■■■□ 3.03
TCF4-259ENST00000627568 RALBP1Q15311 655 aa33.97■■■■□ 3.03
TCF4-259ENST00000627568 TAF7Q15545 349 aaPredicted RBP33.97■■■■□ 3.03
TCF4-259ENST00000627568 USP16Q9Y5T5 823 aa33.97■■■■□ 3.03
TCF4-259ENST00000627568 MAPK8IP3Q9UPT6 1336 aa33.97■■■■□ 3.03
TCF4-259ENST00000627568 TBC1D9BQ66K14 1250 aa33.96■■■■□ 3.03
TCF4-259ENST00000627568 DLEC1Q9Y238 1755 aa33.95■■■■□ 3.03
TCF4-259ENST00000627568 CARMIL3Q8ND23 1372 aa33.95■■■■□ 3.02
TCF4-259ENST00000627568 BCORQ6W2J9 1755 aa33.94■■■■□ 3.02
TCF4-259ENST00000627568 DZIP3Q86Y13 1208 aaKnown RBP33.94■■■■□ 3.02
TCF4-259ENST00000627568 PLEKHF1Q96S99 279 aa33.94■■■■□ 3.02
TCF4-259ENST00000627568 PRAMEF22A3QJZ6 481 aa33.93■■■■□ 3.02
TCF4-259ENST00000627568 NFE2L2Q16236 605 aa33.92■■■■□ 3.02
TCF4-259ENST00000627568 PNISRQ8TF01 805 aaKnown RBP33.92■■■■□ 3.02
TCF4-259ENST00000627568 CAMTA2O94983 1202 aa33.91■■■■□ 3.02
TCF4-259ENST00000627568 PIP4K2AP48426 406 aaPredicted RBP33.91■■■■□ 3.02
TCF4-259ENST00000627568 DDX10Q13206 875 aaKnown RBP33.9■■■■□ 3.02
TCF4-259ENST00000627568 C2CD5Q86YS7 1000 aa33.9■■■■□ 3.02
TCF4-259ENST00000627568 SETDB2Q96T68 719 aa33.9■■■■□ 3.02
TCF4-259ENST00000627568 H0YIN7 160 aa33.89■■■■□ 3.02
TCF4-259ENST00000627568 NPHP1O15259 732 aa33.89■■■■□ 3.02
TCF4-259ENST00000627568 C9orf131Q5VYM1 1079 aa33.89■■■■□ 3.02
TCF4-259ENST00000627568 LAMB4A4D0S4 1761 aa33.89■■■■□ 3.02
TCF4-259ENST00000627568 KDM3BQ7LBC6 1761 aa33.88■■■■□ 3.01
TCF4-259ENST00000627568 MIS18AQ9NYP9 233 aa33.88■■■■□ 3.01
TCF4-259ENST00000627568 TTLL6Q8N841 843 aa33.87■■■■□ 3.01
TCF4-259ENST00000627568 ZNF652Q9Y2D9 606 aa33.87■■■■□ 3.01
TCF4-259ENST00000627568 ANKRD31Q8N7Z5 1873 aa33.86■■■■□ 3.01
TCF4-259ENST00000627568 PDZRN3Q9UPQ7 1066 aa33.86■■■■□ 3.01
TCF4-259ENST00000627568 PDE6BP35913 854 aa33.85■■■■□ 3.01
TCF4-259ENST00000627568 PRR5LQ6MZQ0 368 aa33.85■■■■□ 3.01
TCF4-259ENST00000627568 CNBD1Q8NA66 436 aa33.85■■■■□ 3.01
TCF4-259ENST00000627568 BRIP1Q9BX63 1249 aa33.85■■■■□ 3.01
TCF4-259ENST00000627568 RNF181Q9P0P0 153 aa33.84■■■■□ 3.01
TCF4-259ENST00000627568 MYBBP1AQ9BQG0 1328 aaKnown RBP33.83■■■■□ 3.01
TCF4-259ENST00000627568 SBF1O95248 1867 aa33.83■■■■□ 3.01
TCF4-259ENST00000627568 CLEC4GQ6UXB4 293 aa33.83■■■■□ 3.01
TCF4-259ENST00000627568 ST5P78524 1137 aa33.82■■■■□ 3
TCF4-259ENST00000627568 THUMPD2Q9BTF0 503 aaKnown RBP33.82■■■■□ 3
TCF4-259ENST00000627568 KIF3CO14782 793 aa33.81■■■■□ 3
TCF4-259ENST00000627568 NBPF26B4DH59 902 aa33.8■■■■□ 3
TCF4-259ENST00000627568 NBPF10Q6P3W6 841 aaKnown RBP33.8■■■■□ 3
TCF4-259ENST00000627568 CCDC24Q8N4L8 307 aa33.8■■■■□ 3
TCF4-259ENST00000627568 NBPF15Q8N660 670 aa33.8■■■■□ 3
TCF4-259ENST00000627568 ZNF622Q969S3 477 aaKnown RBP eCLIP33.8■■■■□ 33e-6■■■■□ 24.2
TCF4-259ENST00000627568 COL11A2P13942 1736 aaPredicted RBP33.79■■■■□ 3
TCF4-259ENST00000627568 RGL2O15211 777 aa33.78■■■■□ 3
TCF4-259ENST00000627568 EIF4A1P60842 406 aaKnown RBP33.77■■■■□ 3
TCF4-259ENST00000627568 RASSF7Q02833 373 aa33.77■■■■□ 3
TCF4-259ENST00000627568 NBPF5PQ86XG9 351 aaPredicted RBP33.77■■■■□ 3
TCF4-259ENST00000627568 RIPK4P57078 832 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms