RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 MYL6BP14649 208 aa17.13■□□□□ 0.33
PDXDC1-218ENST00000627450 ATG3Q9NT62 314 aa17.13■□□□□ 0.33
PDXDC1-218ENST00000627450 SKAP1Q86WV1 359 aa17.13■□□□□ 0.33
PDXDC1-218ENST00000627450 DBF4Q9UBU7 674 aaPredicted RBP17.13■□□□□ 0.33
PDXDC1-218ENST00000627450 KCNQ2O43526 872 aa17.12■□□□□ 0.33
PDXDC1-218ENST00000627450 PDIA6Q15084 440 aa17.12■□□□□ 0.33
PDXDC1-218ENST00000627450 C1orf115Q9H7X2 142 aa17.12■□□□□ 0.33
PDXDC1-218ENST00000627450 QTRT2Q9H974 415 aaKnown RBP17.12■□□□□ 0.33
PDXDC1-218ENST00000627450 CACNA1FO60840 1977 aa17.12■□□□□ 0.33
PDXDC1-218ENST00000627450 GLI3P10071 1580 aa17.12■□□□□ 0.33
PDXDC1-218ENST00000627450 IGHDP01880 384 aa17.12■□□□□ 0.33
PDXDC1-218ENST00000627450 DOT1LQ8TEK3 1739 aa17.11■□□□□ 0.33
PDXDC1-218ENST00000627450 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.11■□□□□ 0.33
PDXDC1-218ENST00000627450 BCL9O00512 1426 aa17.11■□□□□ 0.33
PDXDC1-218ENST00000627450 ZBTB7BO15156 539 aaPredicted RBP17.11■□□□□ 0.33
PDXDC1-218ENST00000627450 AIMP1Q12904 312 aaKnown RBP17.11■□□□□ 0.33
PDXDC1-218ENST00000627450 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
PDXDC1-218ENST00000627450 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
PDXDC1-218ENST00000627450 ZBTB40Q9NUA8 1239 aa17.11■□□□□ 0.33
PDXDC1-218ENST00000627450 TRPC5Q9UL62 973 aaPredicted RBP17.11■□□□□ 0.33
PDXDC1-218ENST00000627450 PI4KAP2A4QPH2 592 aa17.09■□□□□ 0.33
PDXDC1-218ENST00000627450 INTS3Q68E01 1043 aaKnown RBP17.09■□□□□ 0.33
PDXDC1-218ENST00000627450 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
PDXDC1-218ENST00000627450 PI4KAP1Q8N8J0 262 aa17.09■□□□□ 0.33
PDXDC1-218ENST00000627450 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
PDXDC1-218ENST00000627450 DDX21Q9NR30 783 aaKnown RBP eCLIP17.09■□□□□ 0.33
PDXDC1-218ENST00000627450 PAPPAQ13219 1627 aa17.09■□□□□ 0.33
PDXDC1-218ENST00000627450 A1BGP04217 495 aa17.08■□□□□ 0.33
PDXDC1-218ENST00000627450 SLC4A9Q96Q91 983 aa17.08■□□□□ 0.33
PDXDC1-218ENST00000627450 ATRNO75882 1429 aa17.08■□□□□ 0.32
PDXDC1-218ENST00000627450 KDM2BQ8NHM5 1336 aa17.07■□□□□ 0.32
PDXDC1-218ENST00000627450 MEIS3Q99687 375 aa17.07■□□□□ 0.32
PDXDC1-218ENST00000627450 DNAJC10Q8IXB1 793 aa17.06■□□□□ 0.32
PDXDC1-218ENST00000627450 SEPT12Q8IYM1 358 aa17.06■□□□□ 0.32
PDXDC1-218ENST00000627450 NBPF26B4DH59 902 aa17.06■□□□□ 0.32
PDXDC1-218ENST00000627450 NBPF14Q5TI25 921 aa17.06■□□□□ 0.32
PDXDC1-218ENST00000627450 NBPF10Q6P3W6 841 aaKnown RBP17.06■□□□□ 0.32
PDXDC1-218ENST00000627450 NBPF15Q8N660 670 aa17.06■□□□□ 0.32
PDXDC1-218ENST00000627450 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
PDXDC1-218ENST00000627450 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
PDXDC1-218ENST00000627450 COPS6Q7L5N1 327 aa17.05■□□□□ 0.32
PDXDC1-218ENST00000627450 LRP10Q7Z4F1 713 aa17.05■□□□□ 0.32
PDXDC1-218ENST00000627450 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
PDXDC1-218ENST00000627450 ADCY9O60503 1353 aa17.05■□□□□ 0.32
PDXDC1-218ENST00000627450 THSD7AQ9UPZ6 1657 aa17.05■□□□□ 0.32
PDXDC1-218ENST00000627450 MAP3K2Q9Y2U5 619 aa17.04■□□□□ 0.32
PDXDC1-218ENST00000627450 DNAAF4Q8WXU2 420 aa17.04■□□□□ 0.32
PDXDC1-218ENST00000627450 ZNF330Q9Y3S2 320 aaPredicted RBP17.04■□□□□ 0.32
PDXDC1-218ENST00000627450 CCT4P50991 539 aaKnown RBP17.03■□□□□ 0.32
PDXDC1-218ENST00000627450 ONECUT3O60422 494 aaPredicted RBP17.03■□□□□ 0.32
PDXDC1-218ENST00000627450 CENPQQ7L2Z9 268 aaPredicted RBP17.03■□□□□ 0.32
PDXDC1-218ENST00000627450 AAMPQ13685 434 aa17.02■□□□□ 0.32
PDXDC1-218ENST00000627450 LAMB4A4D0S4 1761 aa17.02■□□□□ 0.31
PDXDC1-218ENST00000627450 KCNQ4P56696 695 aa17.02■□□□□ 0.31
PDXDC1-218ENST00000627450 KSR2Q6VAB6 950 aa17.02■□□□□ 0.31
PDXDC1-218ENST00000627450 CWF19L2Q2TBE0 894 aaKnown RBP17.01■□□□□ 0.31
PDXDC1-218ENST00000627450 BEND3Q5T5X7 828 aa17.01■□□□□ 0.31
PDXDC1-218ENST00000627450 SIRT2Q8IXJ6 389 aa17.01■□□□□ 0.31
PDXDC1-218ENST00000627450 TTLL7Q6ZT98 887 aa17■□□□□ 0.31
PDXDC1-218ENST00000627450 RIC3Q7Z5B4 369 aa17■□□□□ 0.31
PDXDC1-218ENST00000627450 VSIG10Q8N0Z9 540 aa17■□□□□ 0.31
PDXDC1-218ENST00000627450 SRCIN1Q9C0H9 1055 aa17■□□□□ 0.31
PDXDC1-218ENST00000627450 FBXO41Q8TF61 875 aa16.99■□□□□ 0.31
PDXDC1-218ENST00000627450 USP44Q9H0E7 712 aa16.99■□□□□ 0.31
PDXDC1-218ENST00000627450 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
PDXDC1-218ENST00000627450 PALLDQ8WX93 1383 aa16.98■□□□□ 0.31
PDXDC1-218ENST00000627450 LOC102724428A0A0B4J2F2 783 aa16.98■□□□□ 0.31
PDXDC1-218ENST00000627450 ATP6V1AP38606 617 aa16.98■□□□□ 0.31
PDXDC1-218ENST00000627450 SIK1P57059 783 aa16.98■□□□□ 0.31
PDXDC1-218ENST00000627450 RWDD1Q9H446 243 aaPredicted RBP16.98■□□□□ 0.31
PDXDC1-218ENST00000627450 STARD3NLO95772 234 aa16.98■□□□□ 0.31
PDXDC1-218ENST00000627450 DDX58O95786 925 aaKnown RBP16.98■□□□□ 0.31
PDXDC1-218ENST00000627450 CYP19A1P11511 503 aaPredicted RBP16.98■□□□□ 0.31
PDXDC1-218ENST00000627450 ARXQ96QS3 562 aa16.98■□□□□ 0.31
PDXDC1-218ENST00000627450 NBPF7P0C2Y1 421 aaPredicted RBP16.97■□□□□ 0.31
PDXDC1-218ENST00000627450 ZBTB1Q9Y2K1 713 aa16.97■□□□□ 0.31
PDXDC1-218ENST00000627450 ITPK1Q13572 414 aa16.97■□□□□ 0.31
PDXDC1-218ENST00000627450 CHMP4BQ9H444 224 aaKnown RBP16.97■□□□□ 0.31
PDXDC1-218ENST00000627450 ZNF772Q68DY9 489 aaPredicted RBP16.96■□□□□ 0.31
PDXDC1-218ENST00000627450 MYD88Q99836 296 aa16.96■□□□□ 0.31
PDXDC1-218ENST00000627450 ZBTB3Q9H5J0 574 aa16.96■□□□□ 0.31
PDXDC1-218ENST00000627450 IGKV5-2P06315 115 aa16.96■□□□□ 0.31
PDXDC1-218ENST00000627450 TEX13AQ9BXU3 409 aaPredicted RBP16.96■□□□□ 0.31
PDXDC1-218ENST00000627450 PXDNLA1KZ92 1463 aa16.96■□□□□ 0.31
PDXDC1-218ENST00000627450 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
PDXDC1-218ENST00000627450 HDAC1Q13547 482 aaPredicted RBP16.95■□□□□ 0.3
PDXDC1-218ENST00000627450 BRWD3Q6RI45 1802 aa16.95■□□□□ 0.3
PDXDC1-218ENST00000627450 ATP10DQ9P241 1426 aa16.95■□□□□ 0.3
PDXDC1-218ENST00000627450 CEP85Q6P2H3 762 aa16.95■□□□□ 0.3
PDXDC1-218ENST00000627450 LRRFIP2Q9Y608 721 aaKnown RBP16.95■□□□□ 0.3
PDXDC1-218ENST00000627450 ERBB4Q15303 1308 aa16.95■□□□□ 0.3
PDXDC1-218ENST00000627450 RGS3P49796 1198 aa16.94■□□□□ 0.3
PDXDC1-218ENST00000627450 RGS17Q9UGC6 210 aaPredicted RBP16.94■□□□□ 0.3
PDXDC1-218ENST00000627450 RBM6P78332 1123 aaKnown RBP16.94■□□□□ 0.3
PDXDC1-218ENST00000627450 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
PDXDC1-218ENST00000627450 JARID2Q92833 1246 aaPredicted RBP16.94■□□□□ 0.3
PDXDC1-218ENST00000627450 TJP1Q07157 1748 aa16.94■□□□□ 0.3
PDXDC1-218ENST00000627450 GNAI2P04899 355 aa16.93■□□□□ 0.3
PDXDC1-218ENST00000627450 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
PDXDC1-218ENST00000627450 KRT27Q7Z3Y8 459 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms