RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 POLRMTO00411 1230 aaKnown RBP12.64□□□□□ -0.39
CHD2-210ENST00000627200 KCNA3P22001 575 aa12.64□□□□□ -0.39
CHD2-210ENST00000627200 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
CHD2-210ENST00000627200 ZNF496Q96IT1 587 aaPredicted RBP12.64□□□□□ -0.39
CHD2-210ENST00000627200 KCNQ3O43525 872 aa12.63□□□□□ -0.39
CHD2-210ENST00000627200 ZPR1O75312 459 aa12.63□□□□□ -0.39
CHD2-210ENST00000627200 CHRNA5P30532 468 aa12.63□□□□□ -0.39
CHD2-210ENST00000627200 TEFQ10587 303 aa12.63□□□□□ -0.39
CHD2-210ENST00000627200 NFIXQ14938 502 aa12.63□□□□□ -0.39
CHD2-210ENST00000627200 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
CHD2-210ENST00000627200 CFAP53Q96M91 514 aa12.63□□□□□ -0.39
CHD2-210ENST00000627200 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
CHD2-210ENST00000627200 GPBP1L1Q9HC44 474 aaPredicted RBP12.63□□□□□ -0.39
CHD2-210ENST00000627200 CEMIPQ8WUJ3 1361 aa12.63□□□□□ -0.39
CHD2-210ENST00000627200 SCN7AQ01118 1682 aa12.63□□□□□ -0.39
CHD2-210ENST00000627200 NRXN2Q9P2S2 1712 aa12.62□□□□□ -0.39
CHD2-210ENST00000627200 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
CHD2-210ENST00000627200 CARMIL3Q8ND23 1372 aa12.62□□□□□ -0.39
CHD2-210ENST00000627200 HEG1Q9ULI3 1381 aa12.62□□□□□ -0.39
CHD2-210ENST00000627200 FCHSD2O94868 740 aa12.62□□□□□ -0.39
CHD2-210ENST00000627200 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
CHD2-210ENST00000627200 TM4SF1P30408 202 aa12.62□□□□□ -0.39
CHD2-210ENST00000627200 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHD2-210ENST00000627200 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
CHD2-210ENST00000627200 VSIG10Q8N0Z9 540 aa12.62□□□□□ -0.39
CHD2-210ENST00000627200 NARFQ9UHQ1 456 aa12.62□□□□□ -0.39
CHD2-210ENST00000627200 ARHGAP27Q6ZUM4 889 aa12.61□□□□□ -0.39
CHD2-210ENST00000627200 MCM10Q7L590 875 aa12.6□□□□□ -0.39
CHD2-210ENST00000627200 ZNF330Q9Y3S2 320 aaPredicted RBP12.6□□□□□ -0.39
CHD2-210ENST00000627200 DLEC1Q9Y238 1755 aa12.59□□□□□ -0.39
CHD2-210ENST00000627200 PRAMEF22A3QJZ6 481 aa12.59□□□□□ -0.39
CHD2-210ENST00000627200 STARD3NLO95772 234 aa12.59□□□□□ -0.39
CHD2-210ENST00000627200 PIP4K2AP48426 406 aaPredicted RBP12.59□□□□□ -0.39
CHD2-210ENST00000627200 EIF5P55010 431 aaKnown RBP12.59□□□□□ -0.39
CHD2-210ENST00000627200 DCTN1Q14203 1278 aa12.59□□□□□ -0.39
CHD2-210ENST00000627200 BICDL1Q6ZP65 573 aa12.59□□□□□ -0.39
CHD2-210ENST00000627200 PIM2Q9P1W9 311 aa12.59□□□□□ -0.39
CHD2-210ENST00000627200 NUDCQ9Y266 331 aa12.59□□□□□ -0.39
CHD2-210ENST00000627200 BTBD11A6QL63 1104 aa12.58□□□□□ -0.4
CHD2-210ENST00000627200 A1BGP04217 495 aa12.58□□□□□ -0.4
CHD2-210ENST00000627200 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
CHD2-210ENST00000627200 ANKRD31Q8N7Z5 1873 aa12.58□□□□□ -0.4
CHD2-210ENST00000627200 FMNL2Q96PY5 1086 aa12.58□□□□□ -0.4
CHD2-210ENST00000627200 TBC1D2BQ9UPU7 963 aa12.58□□□□□ -0.4
CHD2-210ENST00000627200 BCORQ6W2J9 1755 aa12.58□□□□□ -0.4
CHD2-210ENST00000627200 COL11A2P13942 1736 aaPredicted RBP12.57□□□□□ -0.4
CHD2-210ENST00000627200 KIF3CO14782 793 aa12.57□□□□□ -0.4
CHD2-210ENST00000627200 SERPINB2P05120 415 aa12.57□□□□□ -0.4
CHD2-210ENST00000627200 TBC1D9BQ66K14 1250 aa12.57□□□□□ -0.4
CHD2-210ENST00000627200 C9orf131Q5VYM1 1079 aa12.56□□□□□ -0.4
CHD2-210ENST00000627200 CCDC24Q8N4L8 307 aa12.56□□□□□ -0.4
CHD2-210ENST00000627200 CEP350Q5VT06 3117 aa12.56□□□□□ -0.4
CHD2-210ENST00000627200 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
CHD2-210ENST00000627200 RASSF7Q02833 373 aa12.55□□□□□ -0.4
CHD2-210ENST00000627200 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
CHD2-210ENST00000627200 NMRK2Q9NPI5 230 aa12.55□□□□□ -0.4
CHD2-210ENST00000627200 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
CHD2-210ENST00000627200 A0A087WZG4 1122 aa12.54□□□□□ -0.4
CHD2-210ENST00000627200 CAMTA2O94983 1202 aa12.54□□□□□ -0.4
CHD2-210ENST00000627200 IL6STP40189 918 aaPredicted RBP12.54□□□□□ -0.4
CHD2-210ENST00000627200 C2CD5Q86YS7 1000 aa12.54□□□□□ -0.4
CHD2-210ENST00000627200 TEX13AQ9BXU3 409 aaPredicted RBP12.54□□□□□ -0.4
CHD2-210ENST00000627200 SBF1O95248 1867 aa12.54□□□□□ -0.4
CHD2-210ENST00000627200 LAMB4A4D0S4 1761 aa12.53□□□□□ -0.4
CHD2-210ENST00000627200 PRELPP51888 382 aa12.53□□□□□ -0.4
CHD2-210ENST00000627200 THUMPD2Q9BTF0 503 aaKnown RBP12.53□□□□□ -0.4
CHD2-210ENST00000627200 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
CHD2-210ENST00000627200 RNF181Q9P0P0 153 aa12.53□□□□□ -0.4
CHD2-210ENST00000627200 KDM3BQ7LBC6 1761 aa12.53□□□□□ -0.4
CHD2-210ENST00000627200 TIAM2Q8IVF5 1701 aa12.52□□□□□ -0.41
CHD2-210ENST00000627200 PRR5LQ6MZQ0 368 aa12.52□□□□□ -0.41
CHD2-210ENST00000627200 DZIP3Q86Y13 1208 aaKnown RBP12.52□□□□□ -0.41
CHD2-210ENST00000627200 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
CHD2-210ENST00000627200 NBPF26B4DH59 902 aa12.51□□□□□ -0.41
CHD2-210ENST00000627200 SNRPA1P09661 255 aaKnown RBP12.51□□□□□ -0.41
CHD2-210ENST00000627200 HSPA6P17066 643 aa12.51□□□□□ -0.41
CHD2-210ENST00000627200 NBPF10Q6P3W6 841 aaKnown RBP12.51□□□□□ -0.41
CHD2-210ENST00000627200 NBPF15Q8N660 670 aa12.51□□□□□ -0.41
CHD2-210ENST00000627200 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
CHD2-210ENST00000627200 TTLL6Q8N841 843 aa12.5□□□□□ -0.41
CHD2-210ENST00000627200 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
CHD2-210ENST00000627200 H0YIN7 160 aa12.49□□□□□ -0.41
CHD2-210ENST00000627200 NFKBIEO00221 500 aa12.49□□□□□ -0.41
CHD2-210ENST00000627200 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
CHD2-210ENST00000627200 NPM2Q86SE8 214 aaKnown RBP12.49□□□□□ -0.41
CHD2-210ENST00000627200 CNBD1Q8NA66 436 aa12.49□□□□□ -0.41
CHD2-210ENST00000627200 ZNF622Q969S3 477 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHD2-210ENST00000627200 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
CHD2-210ENST00000627200 TAF7Q15545 349 aaPredicted RBP12.48□□□□□ -0.41
CHD2-210ENST00000627200 NFE2L2Q16236 605 aa12.48□□□□□ -0.41
CHD2-210ENST00000627200 SETDB2Q96T68 719 aa12.48□□□□□ -0.41
CHD2-210ENST00000627200 BRIP1Q9BX63 1249 aa12.48□□□□□ -0.41
CHD2-210ENST00000627200 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
CHD2-210ENST00000627200 SLX4Q8IY92 1834 aa12.47□□□□□ -0.41
CHD2-210ENST00000627200 NPHP1O15259 732 aa12.47□□□□□ -0.41
CHD2-210ENST00000627200 C21orf2O43822 256 aa12.47□□□□□ -0.41
CHD2-210ENST00000627200 ARFGEF2Q9Y6D5 1785 aa12.46□□□□□ -0.41
CHD2-210ENST00000627200 MAPK8IP3Q9UPT6 1336 aa12.46□□□□□ -0.41
CHD2-210ENST00000627200 FAM177BA6PVY3 158 aa12.46□□□□□ -0.41
CHD2-210ENST00000627200 TOMM70O94826 608 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms