RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 GPR153Q6NV75 609 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 LNPKQ9C0E8 428 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 TERF2IPQ9NYB0 399 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 AATKQ6ZMQ8 1374 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 SSH2Q76I76 1423 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 MINK1Q8N4C8 1332 aaPredicted RBP5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 MBD3O95983 291 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 NCLP19338 710 aaKnown RBP5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 GTF2F1P35269 517 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 RBM10P98175 930 aaKnown RBP5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 MLECQ14165 292 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 ILDR1Q86SU0 546 aaPredicted RBP5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 MYRIPQ8NFW9 859 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 PRIMPOLQ96LW4 560 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 CCDC94Q9BW85 323 aaPredicted RBP5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 ESF1Q9H501 851 aaKnown RBP5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 CABP2Q9NPB3 220 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 FAM13BQ9NYF5 915 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 PCDHB8Q9UN66 801 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 XIRP1Q702N8 1843 aaKnown RBP5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 STRCP1A6NGW2 1772 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 U2AF1L5P0DN76 240 aaPredicted RBP5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 PRIM1P49642 420 aaKnown RBP5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 U2AF1Q01081 240 aaKnown RBP eCLIP5.11□□□□□ -1.592e-20■■■■■ 72.7
PTP4A1-205ENST00000626021 ANKRD45Q5TZF3 282 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 MCTP1Q6DN14 999 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 USP26Q9BXU7 913 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 GTPBP4Q9BZE4 634 aaKnown RBP5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.11□□□□□ -1.591e-7■■■■■ 29.6
PTP4A1-205ENST00000626021 PODXL2Q9NZ53 605 aa5.11□□□□□ -1.59
PTP4A1-205ENST00000626021 FAM208AQ9UK61 1670 aaKnown RBP5.1□□□□□ -1.59
PTP4A1-205ENST00000626021 SRPK2P78362 688 aaKnown RBP5.1□□□□□ -1.59
PTP4A1-205ENST00000626021 HMGN5P82970 282 aaKnown RBP5.1□□□□□ -1.59
PTP4A1-205ENST00000626021 DMTNQ08495 405 aa5.1□□□□□ -1.59
PTP4A1-205ENST00000626021 CAVIN1Q6NZI2 390 aaKnown RBP5.1□□□□□ -1.59
PTP4A1-205ENST00000626021 TRAF7Q6Q0C0 670 aa5.1□□□□□ -1.59
PTP4A1-205ENST00000626021 TSR2Q969E8 191 aaKnown RBP5.1□□□□□ -1.59
PTP4A1-205ENST00000626021 CDK19Q9BWU1 502 aa5.1□□□□□ -1.59
PTP4A1-205ENST00000626021 STK26Q9P289 416 aa5.1□□□□□ -1.59
PTP4A1-205ENST00000626021 USP6P35125 1406 aa5.1□□□□□ -1.59
PTP4A1-205ENST00000626021 RGPD2P0DJD1 1756 aa5.1□□□□□ -1.59
PTP4A1-205ENST00000626021 ALS2Q96Q42 1657 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 WASLO00401 505 aaPredicted RBP5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 XPCQ01831 940 aaPredicted RBP5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 HDGFL2Q7Z4V5 671 aaPredicted RBP5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 HS6ST3Q8IZP7 471 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 MRPL50Q8N5N7 158 aaKnown RBP5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 GPT2Q8TD30 523 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 TCHHQ07283 1943 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 ABCC4O15439 1325 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 PRR36Q9H6K5 1346 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 SOX12O15370 315 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 KIF20AO95235 890 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 MCM2P49736 904 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 INTS3Q68E01 1043 aaKnown RBP5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 FAM184AQ8NB25 1140 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 DCTPP1Q9H773 170 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 TUBGCP6Q96RT7 1819 aa5.09□□□□□ -1.59
PTP4A1-205ENST00000626021 LMO7Q8WWI1 1683 aa5.09□□□□□ -1.6
PTP4A1-205ENST00000626021 SIPA1L3O60292 1781 aaPredicted RBP5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 FYB1O15117 783 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 VAMP4O75379 141 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 PRPF40AO75400 957 aaKnown RBP5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 FCHSD2O94868 740 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 KIAA2012Q0VF49 1180 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 TTC22Q5TAA0 569 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 PLEKHM2Q8IWE5 1019 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 PIBF1Q8WXW3 757 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 SYAP1Q96A49 352 aaPredicted RBP5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 IL17RAQ96F46 866 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 DNAJC5Q9H3Z4 198 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 TMEM63CQ9P1W3 806 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 ZDHHC9Q9Y397 364 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 BOLA1Q9Y3E2 137 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 TBX22Q9Y458 520 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 USP31Q70CQ4 1352 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 GSPT1P15170 499 aaKnown RBP5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 ZSCAN20P17040 1043 aaPredicted RBP5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 LTKP29376 864 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 SAFB2Q14151 953 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 SIRT2Q8IXJ6 389 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 INTS4Q96HW7 963 aaKnown RBP5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 ZFP91Q96JP5 570 aaPredicted RBP5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 API5Q9BZZ5 524 aaKnown RBP5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 KDM3BQ7LBC6 1761 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 RGPD5Q99666 1765 aa5.08□□□□□ -1.6
PTP4A1-205ENST00000626021 NFAT5O94916 1531 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 EPB41L2O43491 1005 aaKnown RBP5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 PHF14O94880 888 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 LETM1O95202 739 aaPredicted RBP5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 BRD1O95696 1058 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 TNNT2P45379 298 aaPredicted RBP5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 CUL4AQ13619 759 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 CASC1Q6TDU7 716 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 WAPLQ7Z5K2 1190 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 RPAP2Q8IXW5 612 aaPredicted RBP5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 TSPY26PQ9H489 355 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 SPTLC3Q9NUV7 552 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 ADGRL3Q9HAR2 1447 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms