RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 TM4SF1P30408 202 aa19.54■□□□□ 0.72
TUBB3-215ENST00000625617 VSIG10Q8N0Z9 540 aa19.54■□□□□ 0.72
TUBB3-215ENST00000625617 NARFQ9UHQ1 456 aa19.54■□□□□ 0.72
TUBB3-215ENST00000625617 TTC5Q8N0Z6 440 aa19.53■□□□□ 0.72
TUBB3-215ENST00000625617 NMRK2Q9NPI5 230 aa19.53■□□□□ 0.72
TUBB3-215ENST00000625617 U2SURPO15042 1029 aaKnown RBP19.52■□□□□ 0.72
TUBB3-215ENST00000625617 TOMM70O94826 608 aa19.52■□□□□ 0.72
TUBB3-215ENST00000625617 NFIXQ14938 502 aa19.52■□□□□ 0.72
TUBB3-215ENST00000625617 CNGB1Q14028 1251 aaPredicted RBP19.51■□□□□ 0.71
TUBB3-215ENST00000625617 RNF181Q9P0P0 153 aa19.51■□□□□ 0.71
TUBB3-215ENST00000625617 ARFGEF1Q9Y6D6 1849 aa19.51■□□□□ 0.71
TUBB3-215ENST00000625617 GAS2L2Q8NHY3 880 aa19.5■□□□□ 0.71
TUBB3-215ENST00000625617 STARD3NLO95772 234 aa19.49■□□□□ 0.71
TUBB3-215ENST00000625617 CANXP27824 592 aaKnown RBP19.49■□□□□ 0.71
TUBB3-215ENST00000625617 APLP1P51693 650 aa19.49■□□□□ 0.71
TUBB3-215ENST00000625617 TEFQ10587 303 aa19.49■□□□□ 0.71
TUBB3-215ENST00000625617 BCL2L12Q9HB09 334 aa19.49■□□□□ 0.71
TUBB3-215ENST00000625617 UBR2Q8IWV8 1755 aa19.48■□□□□ 0.71
TUBB3-215ENST00000625617 KDM2BQ8NHM5 1336 aa19.48■□□□□ 0.71
TUBB3-215ENST00000625617 GNAT3A8MTJ3 354 aa19.47■□□□□ 0.71
TUBB3-215ENST00000625617 SERPINB2P05120 415 aa19.47■□□□□ 0.71
TUBB3-215ENST00000625617 C16orf71Q8IYS4 520 aaPredicted RBP19.47■□□□□ 0.71
TUBB3-215ENST00000625617 HEG1Q9ULI3 1381 aa19.46■□□□□ 0.71
TUBB3-215ENST00000625617 A0A087WZG4 1122 aa19.46■□□□□ 0.71
TUBB3-215ENST00000625617 ZNF790Q6PG37 636 aa19.46■□□□□ 0.71
TUBB3-215ENST00000625617 ZNF496Q96IT1 587 aaPredicted RBP19.46■□□□□ 0.71
TUBB3-215ENST00000625617 NRXN2Q9P2S2 1712 aa19.45■□□□□ 0.7
TUBB3-215ENST00000625617 EIF5P55010 431 aaKnown RBP19.45■□□□□ 0.7
TUBB3-215ENST00000625617 RASSF7Q02833 373 aa19.45■□□□□ 0.7
TUBB3-215ENST00000625617 IFFO2Q5TF58 517 aa19.45■□□□□ 0.7
TUBB3-215ENST00000625617 IL17REQ8NFR9 667 aa19.45■□□□□ 0.7
TUBB3-215ENST00000625617 RBM46Q8TBY0 533 aaKnown RBP19.45■□□□□ 0.7
TUBB3-215ENST00000625617 CARMIL3Q8ND23 1372 aa19.44■□□□□ 0.7
TUBB3-215ENST00000625617 BICDL1Q6ZP65 573 aa19.44■□□□□ 0.7
TUBB3-215ENST00000625617 TEX13AQ9BXU3 409 aaPredicted RBP19.44■□□□□ 0.7
TUBB3-215ENST00000625617 ZNF330Q9Y3S2 320 aaPredicted RBP19.44■□□□□ 0.7
TUBB3-215ENST00000625617 C2CD5Q86YS7 1000 aa19.43■□□□□ 0.7
TUBB3-215ENST00000625617 TTLL6Q8N841 843 aa19.43■□□□□ 0.7
TUBB3-215ENST00000625617 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
TUBB3-215ENST00000625617 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
TUBB3-215ENST00000625617 ZC3H4Q9UPT8 1303 aaKnown RBP19.43■□□□□ 0.7
TUBB3-215ENST00000625617 CEMIPQ8WUJ3 1361 aa19.43■□□□□ 0.7
TUBB3-215ENST00000625617 PRKAR2BP31323 418 aa19.42■□□□□ 0.7
TUBB3-215ENST00000625617 FMNL2Q96PY5 1086 aa19.42■□□□□ 0.7
TUBB3-215ENST00000625617 SCN7AQ01118 1682 aa19.42■□□□□ 0.7
TUBB3-215ENST00000625617 H0YIN7 160 aa19.41■□□□□ 0.7
TUBB3-215ENST00000625617 LMNB1P20700 586 aa19.41■□□□□ 0.7
TUBB3-215ENST00000625617 TBC1D9BQ66K14 1250 aa19.41■□□□□ 0.7
TUBB3-215ENST00000625617 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
TUBB3-215ENST00000625617 IL6STP40189 918 aaPredicted RBP19.4■□□□□ 0.7
TUBB3-215ENST00000625617 FSTL1Q12841 308 aa19.4■□□□□ 0.7
TUBB3-215ENST00000625617 NPM2Q86SE8 214 aaKnown RBP19.4■□□□□ 0.7
TUBB3-215ENST00000625617 RSPH6AQ9H0K4 717 aa19.4■□□□□ 0.7
TUBB3-215ENST00000625617 RRAGCQ9HB90 399 aa19.39■□□□□ 0.69
TUBB3-215ENST00000625617 TBC1D2BQ9UPU7 963 aa19.39■□□□□ 0.69
TUBB3-215ENST00000625617 TNRC6CQ9HCJ0 1690 aaKnown RBP19.39■□□□□ 0.69
TUBB3-215ENST00000625617 DLEC1Q9Y238 1755 aa19.39■□□□□ 0.69
TUBB3-215ENST00000625617 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
TUBB3-215ENST00000625617 PHACTR3Q96KR7 559 aa19.38■□□□□ 0.69
TUBB3-215ENST00000625617 PDZRN3Q9UPQ7 1066 aa19.38■□□□□ 0.69
TUBB3-215ENST00000625617 NUDCQ9Y266 331 aa19.38■□□□□ 0.69
TUBB3-215ENST00000625617 SIPA1L3O60292 1781 aaPredicted RBP19.37■□□□□ 0.69
TUBB3-215ENST00000625617 A1BGP04217 495 aa19.37■□□□□ 0.69
TUBB3-215ENST00000625617 PRR5LQ6MZQ0 368 aa19.37■□□□□ 0.69
TUBB3-215ENST00000625617 NFKBIEO00221 500 aa19.36■□□□□ 0.69
TUBB3-215ENST00000625617 NPHP1O15259 732 aa19.36■□□□□ 0.69
TUBB3-215ENST00000625617 PDE6BP35913 854 aa19.36■□□□□ 0.69
TUBB3-215ENST00000625617 DNAJC5GQ8N7S2 189 aa19.36■□□□□ 0.69
TUBB3-215ENST00000625617 ZNF622Q969S3 477 aaKnown RBP eCLIP19.36■□□□□ 0.69
TUBB3-215ENST00000625617 BRIP1Q9BX63 1249 aa19.36■□□□□ 0.69
TUBB3-215ENST00000625617 KCNQ3O43525 872 aa19.35■□□□□ 0.69
TUBB3-215ENST00000625617 CAMTA2O94983 1202 aa19.35■□□□□ 0.69
TUBB3-215ENST00000625617 U2AF1L5P0DN76 240 aaPredicted RBP19.35■□□□□ 0.69
TUBB3-215ENST00000625617 PRELPP51888 382 aa19.35■□□□□ 0.69
TUBB3-215ENST00000625617 U2AF1Q01081 240 aaKnown RBP eCLIP19.35■□□□□ 0.69
TUBB3-215ENST00000625617 CNBD1Q8NA66 436 aa19.35■□□□□ 0.69
TUBB3-215ENST00000625617 SMC1BQ8NDV3 1235 aa19.35■□□□□ 0.69
TUBB3-215ENST00000625617 WDR90Q96KV7 1748 aa19.34■□□□□ 0.69
TUBB3-215ENST00000625617 DZIP3Q86Y13 1208 aaKnown RBP19.34■□□□□ 0.69
TUBB3-215ENST00000625617 CCDC24Q8N4L8 307 aa19.34■□□□□ 0.69
TUBB3-215ENST00000625617 RTF1Q92541 710 aaKnown RBP19.34■□□□□ 0.69
TUBB3-215ENST00000625617 SETDB2Q96T68 719 aa19.34■□□□□ 0.69
TUBB3-215ENST00000625617 GLTPD2A6NH11 291 aa19.33■□□□□ 0.68
TUBB3-215ENST00000625617 ST5P78524 1137 aa19.33■□□□□ 0.68
TUBB3-215ENST00000625617 PPP2R1AP30153 589 aa19.32■□□□□ 0.68
TUBB3-215ENST00000625617 HTRA3P83110 453 aa19.32■□□□□ 0.68
TUBB3-215ENST00000625617 SBF1O95248 1867 aa19.32■□□□□ 0.68
TUBB3-215ENST00000625617 COL11A2P13942 1736 aaPredicted RBP19.31■□□□□ 0.68
TUBB3-215ENST00000625617 TIAM2Q8IVF5 1701 aa19.31■□□□□ 0.68
TUBB3-215ENST00000625617 C21orf2O43822 256 aa19.31■□□□□ 0.68
TUBB3-215ENST00000625617 VEGFAP15692 232 aaPredicted RBP19.31■□□□□ 0.68
TUBB3-215ENST00000625617 PIP4K2AP48426 406 aaPredicted RBP19.31■□□□□ 0.68
TUBB3-215ENST00000625617 MCM10Q7L590 875 aa19.31■□□□□ 0.68
TUBB3-215ENST00000625617 KLRG1Q96E93 195 aa19.31■□□□□ 0.68
TUBB3-215ENST00000625617 ZNF219Q9P2Y4 722 aaPredicted RBP19.31■□□□□ 0.68
TUBB3-215ENST00000625617 ANKRD31Q8N7Z5 1873 aa19.31■□□□□ 0.68
TUBB3-215ENST00000625617 SNRPA1P09661 255 aaKnown RBP19.3■□□□□ 0.68
TUBB3-215ENST00000625617 ZNF652Q9Y2D9 606 aa19.3■□□□□ 0.68
TUBB3-215ENST00000625617 USP16Q9Y5T5 823 aa19.3■□□□□ 0.68
TUBB3-215ENST00000625617 BCORQ6W2J9 1755 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms