RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 CANXP27824 592 aaKnown RBP18.43■□□□□ 0.54
USH1C-211ENST00000624811 PRKAR2BP31323 418 aa18.43■□□□□ 0.54
USH1C-211ENST00000624811 TEFQ10587 303 aa18.43■□□□□ 0.54
USH1C-211ENST00000624811 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
USH1C-211ENST00000624811 ARFGEF1Q9Y6D6 1849 aa18.42■□□□□ 0.54
USH1C-211ENST00000624811 ARHGAP27Q6ZUM4 889 aa18.42■□□□□ 0.54
USH1C-211ENST00000624811 PHACTR3Q96KR7 559 aa18.42■□□□□ 0.54
USH1C-211ENST00000624811 POLRMTO00411 1230 aaKnown RBP18.41■□□□□ 0.54
USH1C-211ENST00000624811 PPP2R1AP30153 589 aa18.41■□□□□ 0.54
USH1C-211ENST00000624811 KCNA3P22001 575 aa18.4■□□□□ 0.54
USH1C-211ENST00000624811 TM4SF1P30408 202 aa18.4■□□□□ 0.54
USH1C-211ENST00000624811 CHRNA5P30532 468 aa18.4■□□□□ 0.54
USH1C-211ENST00000624811 VSIG10Q8N0Z9 540 aa18.4■□□□□ 0.54
USH1C-211ENST00000624811 ZNF496Q96IT1 587 aaPredicted RBP18.4■□□□□ 0.54
USH1C-211ENST00000624811 RSPH6AQ9H0K4 717 aa18.4■□□□□ 0.54
USH1C-211ENST00000624811 NARFQ9UHQ1 456 aa18.4■□□□□ 0.54
USH1C-211ENST00000624811 U2AF1L5P0DN76 240 aaPredicted RBP18.39■□□□□ 0.53
USH1C-211ENST00000624811 U2AF1Q01081 240 aaKnown RBP eCLIP18.39■□□□□ 0.53
USH1C-211ENST00000624811 ZNF330Q9Y3S2 320 aaPredicted RBP18.39■□□□□ 0.53
USH1C-211ENST00000624811 NFIXQ14938 502 aa18.38■□□□□ 0.53
USH1C-211ENST00000624811 ZNF790Q6PG37 636 aa18.38■□□□□ 0.53
USH1C-211ENST00000624811 PIM2Q9P1W9 311 aa18.38■□□□□ 0.53
USH1C-211ENST00000624811 NUDCQ9Y266 331 aa18.38■□□□□ 0.53
USH1C-211ENST00000624811 KCNQ3O43525 872 aa18.37■□□□□ 0.53
USH1C-211ENST00000624811 STARD3NLO95772 234 aa18.37■□□□□ 0.53
USH1C-211ENST00000624811 BICDL1Q6ZP65 573 aa18.37■□□□□ 0.53
USH1C-211ENST00000624811 BCL2L12Q9HB09 334 aa18.37■□□□□ 0.53
USH1C-211ENST00000624811 HEG1Q9ULI3 1381 aa18.37■□□□□ 0.53
USH1C-211ENST00000624811 NRXN2Q9P2S2 1712 aa18.37■□□□□ 0.53
USH1C-211ENST00000624811 DALRD3Q5D0E6 543 aaKnown RBP18.36■□□□□ 0.53
USH1C-211ENST00000624811 SCN7AQ01118 1682 aa18.35■□□□□ 0.53
USH1C-211ENST00000624811 CEMIPQ8WUJ3 1361 aa18.35■□□□□ 0.53
USH1C-211ENST00000624811 BTBD11A6QL63 1104 aa18.35■□□□□ 0.53
USH1C-211ENST00000624811 SERPINB2P05120 415 aa18.34■□□□□ 0.53
USH1C-211ENST00000624811 EIF5P55010 431 aaKnown RBP18.34■□□□□ 0.53
USH1C-211ENST00000624811 MCM10Q7L590 875 aa18.34■□□□□ 0.53
USH1C-211ENST00000624811 FMNL2Q96PY5 1086 aa18.34■□□□□ 0.53
USH1C-211ENST00000624811 DLEC1Q9Y238 1755 aa18.34■□□□□ 0.53
USH1C-211ENST00000624811 A1BGP04217 495 aa18.33■□□□□ 0.52
USH1C-211ENST00000624811 TBC1D2BQ9UPU7 963 aa18.33■□□□□ 0.52
USH1C-211ENST00000624811 DLG5Q8TDM6 1919 aa18.33■□□□□ 0.52
USH1C-211ENST00000624811 SBF1O95248 1867 aa18.33■□□□□ 0.52
USH1C-211ENST00000624811 CARMIL3Q8ND23 1372 aa18.32■□□□□ 0.52
USH1C-211ENST00000624811 A0A087WZG4 1122 aa18.32■□□□□ 0.52
USH1C-211ENST00000624811 DCTN1Q14203 1278 aa18.32■□□□□ 0.52
USH1C-211ENST00000624811 C9orf131Q5VYM1 1079 aa18.32■□□□□ 0.52
USH1C-211ENST00000624811 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
USH1C-211ENST00000624811 ANKRD31Q8N7Z5 1873 aa18.31■□□□□ 0.52
USH1C-211ENST00000624811 KIF3CO14782 793 aa18.31■□□□□ 0.52
USH1C-211ENST00000624811 PIP4K2AP48426 406 aaPredicted RBP18.31■□□□□ 0.52
USH1C-211ENST00000624811 TEX13AQ9BXU3 409 aaPredicted RBP18.31■□□□□ 0.52
USH1C-211ENST00000624811 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
USH1C-211ENST00000624811 TBC1D9BQ66K14 1250 aa18.3■□□□□ 0.52
USH1C-211ENST00000624811 CCDC24Q8N4L8 307 aa18.3■□□□□ 0.52
USH1C-211ENST00000624811 BCORQ6W2J9 1755 aa18.3■□□□□ 0.52
USH1C-211ENST00000624811 CCDC88AQ3V6T2 1871 aa18.29■□□□□ 0.52
USH1C-211ENST00000624811 C2CD5Q86YS7 1000 aa18.29■□□□□ 0.52
USH1C-211ENST00000624811 USP16Q9Y5T5 823 aa18.29■□□□□ 0.52
USH1C-211ENST00000624811 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
USH1C-211ENST00000624811 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
USH1C-211ENST00000624811 NPM2Q86SE8 214 aaKnown RBP18.28■□□□□ 0.52
USH1C-211ENST00000624811 NMRK2Q9NPI5 230 aa18.28■□□□□ 0.52
USH1C-211ENST00000624811 RNF181Q9P0P0 153 aa18.28■□□□□ 0.52
USH1C-211ENST00000624811 COL11A2P13942 1736 aaPredicted RBP18.28■□□□□ 0.52
USH1C-211ENST00000624811 RASSF7Q02833 373 aa18.27■□□□□ 0.52
USH1C-211ENST00000624811 H0YIN7 160 aa18.25■□□□□ 0.51
USH1C-211ENST00000624811 CAMTA2O94983 1202 aa18.25■□□□□ 0.51
USH1C-211ENST00000624811 HSPA6P17066 643 aa18.25■□□□□ 0.51
USH1C-211ENST00000624811 DZIP3Q86Y13 1208 aaKnown RBP18.25■□□□□ 0.51
USH1C-211ENST00000624811 MIS18AQ9NYP9 233 aa18.25■□□□□ 0.51
USH1C-211ENST00000624811 NPHP1O15259 732 aa18.24■□□□□ 0.51
USH1C-211ENST00000624811 SNRPA1P09661 255 aaKnown RBP18.24■□□□□ 0.51
USH1C-211ENST00000624811 PRR5LQ6MZQ0 368 aa18.24■□□□□ 0.51
USH1C-211ENST00000624811 TTLL6Q8N841 843 aa18.24■□□□□ 0.51
USH1C-211ENST00000624811 ZNF219Q9P2Y4 722 aaPredicted RBP18.24■□□□□ 0.51
USH1C-211ENST00000624811 LAMB4A4D0S4 1761 aa18.23■□□□□ 0.51
USH1C-211ENST00000624811 KDM3BQ7LBC6 1761 aa18.23■□□□□ 0.51
USH1C-211ENST00000624811 NEFMP07197 916 aa18.23■□□□□ 0.51
USH1C-211ENST00000624811 ZNF622Q969S3 477 aaKnown RBP eCLIP18.23■□□□□ 0.51
USH1C-211ENST00000624811 SETDB2Q96T68 719 aa18.23■□□□□ 0.51
USH1C-211ENST00000624811 TIAM2Q8IVF5 1701 aa18.23■□□□□ 0.51
USH1C-211ENST00000624811 HTATSF1O43719 755 aaKnown RBP18.22■□□□□ 0.51
USH1C-211ENST00000624811 TAF7Q15545 349 aaPredicted RBP18.21■□□□□ 0.51
USH1C-211ENST00000624811 CNBD1Q8NA66 436 aa18.21■□□□□ 0.51
USH1C-211ENST00000624811 THUMPD2Q9BTF0 503 aaKnown RBP18.21■□□□□ 0.51
USH1C-211ENST00000624811 CEP350Q5VT06 3117 aa18.21■□□□□ 0.51
USH1C-211ENST00000624811 TNRC6CQ9HCJ0 1690 aaKnown RBP18.21■□□□□ 0.51
USH1C-211ENST00000624811 NBPF26B4DH59 902 aa18.2■□□□□ 0.5
USH1C-211ENST00000624811 PDE6BP35913 854 aa18.2■□□□□ 0.5
USH1C-211ENST00000624811 PRELPP51888 382 aa18.2■□□□□ 0.5
USH1C-211ENST00000624811 NBPF10Q6P3W6 841 aaKnown RBP18.2■□□□□ 0.5
USH1C-211ENST00000624811 NBPF15Q8N660 670 aa18.2■□□□□ 0.5
USH1C-211ENST00000624811 BRIP1Q9BX63 1249 aa18.2■□□□□ 0.5
USH1C-211ENST00000624811 KDM2BQ8NHM5 1336 aa18.2■□□□□ 0.5
USH1C-211ENST00000624811 TOMM70O94826 608 aa18.19■□□□□ 0.5
USH1C-211ENST00000624811 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
USH1C-211ENST00000624811 C16orf71Q8IYS4 520 aaPredicted RBP18.19■□□□□ 0.5
USH1C-211ENST00000624811 PLEKHF1Q96S99 279 aa18.19■□□□□ 0.5
USH1C-211ENST00000624811 RRAGCQ9HB90 399 aa18.19■□□□□ 0.5
USH1C-211ENST00000624811 SLX4Q8IY92 1834 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms