RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 ZNF526Q8TF50 670 aaPredicted RBP20.9■□□□□ 0.94
ATRX-217ENST00000624668 RSPH6AQ9H0K4 717 aa20.9■□□□□ 0.94
ATRX-217ENST00000624668 BCL2L12Q9HB09 334 aa20.9■□□□□ 0.94
ATRX-217ENST00000624668 PPP2R1AP30153 589 aa20.89■□□□□ 0.93
ATRX-217ENST00000624668 PRKAR2BP31323 418 aa20.89■□□□□ 0.93
ATRX-217ENST00000624668 ZNF496Q96IT1 587 aaPredicted RBP20.89■□□□□ 0.93
ATRX-217ENST00000624668 CEMIPQ8WUJ3 1361 aa20.88■□□□□ 0.93
ATRX-217ENST00000624668 GPBP1L1Q9HC44 474 aaPredicted RBP20.88■□□□□ 0.93
ATRX-217ENST00000624668 NARFQ9UHQ1 456 aa20.88■□□□□ 0.93
ATRX-217ENST00000624668 ZPR1O75312 459 aa20.87■□□□□ 0.93
ATRX-217ENST00000624668 CHRNA5P30532 468 aa20.87■□□□□ 0.93
ATRX-217ENST00000624668 TEFQ10587 303 aa20.87■□□□□ 0.93
ATRX-217ENST00000624668 ZNF790Q6PG37 636 aa20.87■□□□□ 0.93
ATRX-217ENST00000624668 FCHSD2O94868 740 aa20.86■□□□□ 0.93
ATRX-217ENST00000624668 CANXP27824 592 aaKnown RBP20.86■□□□□ 0.93
ATRX-217ENST00000624668 NFIXQ14938 502 aa20.86■□□□□ 0.93
ATRX-217ENST00000624668 TTC5Q8N0Z6 440 aa20.86■□□□□ 0.93
ATRX-217ENST00000624668 CFAP53Q96M91 514 aa20.86■□□□□ 0.93
ATRX-217ENST00000624668 HEG1Q9ULI3 1381 aa20.85■□□□□ 0.93
ATRX-217ENST00000624668 NRXN2Q9P2S2 1712 aa20.85■□□□□ 0.93
ATRX-217ENST00000624668 KCNQ3O43525 872 aa20.85■□□□□ 0.93
ATRX-217ENST00000624668 AFDNP55196 1824 aaKnown RBP20.85■□□□□ 0.93
ATRX-217ENST00000624668 ARFGEF1Q9Y6D6 1849 aa20.84■□□□□ 0.93
ATRX-217ENST00000624668 EIF5P55010 431 aaKnown RBP20.84■□□□□ 0.93
ATRX-217ENST00000624668 ARHGAP27Q6ZUM4 889 aa20.84■□□□□ 0.93
ATRX-217ENST00000624668 PIM2Q9P1W9 311 aa20.83■□□□□ 0.93
ATRX-217ENST00000624668 STARD3NLO95772 234 aa20.82■□□□□ 0.92
ATRX-217ENST00000624668 U2AF1L5P0DN76 240 aaPredicted RBP20.82■□□□□ 0.92
ATRX-217ENST00000624668 U2AF1Q01081 240 aaKnown RBP eCLIP20.82■□□□□ 0.92
ATRX-217ENST00000624668 KIF3CO14782 793 aa20.81■□□□□ 0.92
ATRX-217ENST00000624668 NUDCQ9Y266 331 aa20.81■□□□□ 0.92
ATRX-217ENST00000624668 CARMIL3Q8ND23 1372 aa20.81■□□□□ 0.92
ATRX-217ENST00000624668 DALRD3Q5D0E6 543 aaKnown RBP20.8■□□□□ 0.92
ATRX-217ENST00000624668 SCN7AQ01118 1682 aa20.8■□□□□ 0.92
ATRX-217ENST00000624668 A1BGP04217 495 aa20.79■□□□□ 0.92
ATRX-217ENST00000624668 SERPINB2P05120 415 aa20.79■□□□□ 0.92
ATRX-217ENST00000624668 MCM10Q7L590 875 aa20.79■□□□□ 0.92
ATRX-217ENST00000624668 FMNL2Q96PY5 1086 aa20.79■□□□□ 0.92
ATRX-217ENST00000624668 BTBD11A6QL63 1104 aa20.78■□□□□ 0.92
ATRX-217ENST00000624668 DCTN1Q14203 1278 aa20.78■□□□□ 0.92
ATRX-217ENST00000624668 PRAMEF22A3QJZ6 481 aa20.77■□□□□ 0.92
ATRX-217ENST00000624668 TBC1D9BQ66K14 1250 aa20.77■□□□□ 0.92
ATRX-217ENST00000624668 TEX13AQ9BXU3 409 aaPredicted RBP20.77■□□□□ 0.92
ATRX-217ENST00000624668 TBC1D2BQ9UPU7 963 aa20.77■□□□□ 0.92
ATRX-217ENST00000624668 DLEC1Q9Y238 1755 aa20.77■□□□□ 0.91
ATRX-217ENST00000624668 A0A087WZG4 1122 aa20.76■□□□□ 0.91
ATRX-217ENST00000624668 IL6STP40189 918 aaPredicted RBP20.76■□□□□ 0.91
ATRX-217ENST00000624668 C9orf131Q5VYM1 1079 aa20.76■□□□□ 0.91
ATRX-217ENST00000624668 BICDL1Q6ZP65 573 aa20.76■□□□□ 0.91
ATRX-217ENST00000624668 ZNF330Q9Y3S2 320 aaPredicted RBP20.76■□□□□ 0.91
ATRX-217ENST00000624668 USP16Q9Y5T5 823 aa20.76■□□□□ 0.91
ATRX-217ENST00000624668 PIP4K2AP48426 406 aaPredicted RBP20.75■□□□□ 0.91
ATRX-217ENST00000624668 ANKRD31Q8N7Z5 1873 aa20.74■□□□□ 0.91
ATRX-217ENST00000624668 NMRK2Q9NPI5 230 aa20.74■□□□□ 0.91
ATRX-217ENST00000624668 CAMTA2O94983 1202 aa20.73■□□□□ 0.91
ATRX-217ENST00000624668 CCDC24Q8N4L8 307 aa20.72■□□□□ 0.91
ATRX-217ENST00000624668 RTF1Q92541 710 aaKnown RBP20.72■□□□□ 0.91
ATRX-217ENST00000624668 BCORQ6W2J9 1755 aa20.72■□□□□ 0.91
ATRX-217ENST00000624668 SBF1O95248 1867 aa20.71■□□□□ 0.91
ATRX-217ENST00000624668 PRELPP51888 382 aa20.71■□□□□ 0.91
ATRX-217ENST00000624668 RASSF7Q02833 373 aa20.71■□□□□ 0.91
ATRX-217ENST00000624668 C2CD5Q86YS7 1000 aa20.71■□□□□ 0.91
ATRX-217ENST00000624668 RNF181Q9P0P0 153 aa20.71■□□□□ 0.91
ATRX-217ENST00000624668 COL11A2P13942 1736 aaPredicted RBP20.7■□□□□ 0.9
ATRX-217ENST00000624668 HTATSF1O43719 755 aaKnown RBP20.7■□□□□ 0.9
ATRX-217ENST00000624668 HSPA6P17066 643 aa20.7■□□□□ 0.9
ATRX-217ENST00000624668 PRR5LQ6MZQ0 368 aa20.7■□□□□ 0.9
ATRX-217ENST00000624668 NBPF26B4DH59 902 aa20.69■□□□□ 0.9
ATRX-217ENST00000624668 SNRPA1P09661 255 aaKnown RBP20.69■□□□□ 0.9
ATRX-217ENST00000624668 NBPF10Q6P3W6 841 aaKnown RBP20.69■□□□□ 0.9
ATRX-217ENST00000624668 NBPF15Q8N660 670 aa20.69■□□□□ 0.9
ATRX-217ENST00000624668 PLEKHF1Q96S99 279 aa20.69■□□□□ 0.9
ATRX-217ENST00000624668 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
ATRX-217ENST00000624668 DLG5Q8TDM6 1919 aa20.68■□□□□ 0.9
ATRX-217ENST00000624668 DZIP3Q86Y13 1208 aaKnown RBP20.68■□□□□ 0.9
ATRX-217ENST00000624668 TTLL6Q8N841 843 aa20.68■□□□□ 0.9
ATRX-217ENST00000624668 H0YIN7 160 aa20.67■□□□□ 0.9
ATRX-217ENST00000624668 TAF7Q15545 349 aaPredicted RBP20.66■□□□□ 0.9
ATRX-217ENST00000624668 BRIP1Q9BX63 1249 aa20.66■□□□□ 0.9
ATRX-217ENST00000624668 NFKBIEO00221 500 aa20.65■□□□□ 0.9
ATRX-217ENST00000624668 TOMM70O94826 608 aa20.65■□□□□ 0.9
ATRX-217ENST00000624668 THUMPD2Q9BTF0 503 aaKnown RBP20.65■□□□□ 0.9
ATRX-217ENST00000624668 KDM3BQ7LBC6 1761 aa20.64■□□□□ 0.9
ATRX-217ENST00000624668 SETDB2Q96T68 719 aa20.64■□□□□ 0.89
ATRX-217ENST00000624668 CNBD1Q8NA66 436 aa20.63■□□□□ 0.89
ATRX-217ENST00000624668 LAMB4A4D0S4 1761 aa20.63■□□□□ 0.89
ATRX-217ENST00000624668 PDE6BP35913 854 aa20.62■□□□□ 0.89
ATRX-217ENST00000624668 NFE2L2Q16236 605 aa20.62■□□□□ 0.89
ATRX-217ENST00000624668 NPM2Q86SE8 214 aaKnown RBP20.62■□□□□ 0.89
ATRX-217ENST00000624668 ZNF622Q969S3 477 aaKnown RBP eCLIP20.62■□□□□ 0.891e-11■■■■□ 24.3
ATRX-217ENST00000624668 LMNB1P20700 586 aa20.61■□□□□ 0.89
ATRX-217ENST00000624668 KDM2BQ8NHM5 1336 aa20.6■□□□□ 0.89
ATRX-217ENST00000624668 C21orf2O43822 256 aa20.6■□□□□ 0.89
ATRX-217ENST00000624668 CLEC4GQ6UXB4 293 aa20.6■□□□□ 0.89
ATRX-217ENST00000624668 RRAGCQ9HB90 399 aa20.6■□□□□ 0.89
ATRX-217ENST00000624668 ZNF219Q9P2Y4 722 aaPredicted RBP20.6■□□□□ 0.89
ATRX-217ENST00000624668 TIAM2Q8IVF5 1701 aa20.6■□□□□ 0.89
ATRX-217ENST00000624668 TNRC6CQ9HCJ0 1690 aaKnown RBP20.6■□□□□ 0.89
ATRX-217ENST00000624668 SRGNP10124 158 aa20.59■□□□□ 0.89
ATRX-217ENST00000624668 HLFQ16534 295 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms