RNA–Protein interactions for RNA: ENST00000623604.2

AP005242.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP005242.3, Length 607 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP005242.3-201ENST00000623604 PLSCR1O15162 318 aa10.07□□□□□ -0.8
AP005242.3-201ENST00000623604 DCTN1Q14203 1278 aa10.07□□□□□ -0.8
AP005242.3-201ENST00000623604 MCM10Q7L590 875 aa10.07□□□□□ -0.8
AP005242.3-201ENST00000623604 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
AP005242.3-201ENST00000623604 SMARCC1Q92922 1105 aaPredicted RBP10.07□□□□□ -0.8
AP005242.3-201ENST00000623604 MRC1P22897 1456 aa10.06□□□□□ -0.8
AP005242.3-201ENST00000623604 LCE2DQ5TA82 110 aaPredicted RBP10.06□□□□□ -0.8
AP005242.3-201ENST00000623604 NGEFQ8N5V2 710 aa10.06□□□□□ -0.8
AP005242.3-201ENST00000623604 TRIM35Q9UPQ4 493 aa10.06□□□□□ -0.8
AP005242.3-201ENST00000623604 EN1Q05925 392 aaPredicted RBP10.05□□□□□ -0.8
AP005242.3-201ENST00000623604 GSE1Q14687 1217 aa10.05□□□□□ -0.8
AP005242.3-201ENST00000623604 TAF7Q15545 349 aaPredicted RBP10.05□□□□□ -0.8
AP005242.3-201ENST00000623604 CCDC27Q2M243 656 aa10.05□□□□□ -0.8
AP005242.3-201ENST00000623604 SIPA1L3O60292 1781 aaPredicted RBP10.05□□□□□ -0.8
AP005242.3-201ENST00000623604 RGPD3A6NKT7 1758 aaPredicted RBP10.04□□□□□ -0.8
AP005242.3-201ENST00000623604 RGPD4Q7Z3J3 1758 aa10.04□□□□□ -0.8
AP005242.3-201ENST00000623604 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
AP005242.3-201ENST00000623604 CALD1Q05682 793 aaKnown RBP10.04□□□□□ -0.8
AP005242.3-201ENST00000623604 DEFB132Q7Z7B7 95 aa10.04□□□□□ -0.8
AP005242.3-201ENST00000623604 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
AP005242.3-201ENST00000623604 THUMPD2Q9BTF0 503 aaKnown RBP10.04□□□□□ -0.8
AP005242.3-201ENST00000623604 ATG3Q9NT62 314 aa10.04□□□□□ -0.8
AP005242.3-201ENST00000623604 ASAP1Q9ULH1 1129 aa10.04□□□□□ -0.8
AP005242.3-201ENST00000623604 PALLDQ8WX93 1383 aa10.03□□□□□ -0.8
AP005242.3-201ENST00000623604 BTBD11A6QL63 1104 aa10.03□□□□□ -0.8
AP005242.3-201ENST00000623604 LY75O60449 1722 aa10.03□□□□□ -0.8
AP005242.3-201ENST00000623604 HMGB2P26583 209 aaKnown RBP10.03□□□□□ -0.8
AP005242.3-201ENST00000623604 EZH2Q15910 746 aaKnown RBP10.03□□□□□ -0.8
AP005242.3-201ENST00000623604 TXNRD1Q16881 649 aa10.03□□□□□ -0.8
AP005242.3-201ENST00000623604 SENP3-EIF4A1A0A087X0R7 540 aa10.02□□□□□ -0.81
AP005242.3-201ENST00000623604 SLC39A6Q13433 755 aa10.02□□□□□ -0.81
AP005242.3-201ENST00000623604 SLC27A3Q5K4L6 730 aa10.02□□□□□ -0.81
AP005242.3-201ENST00000623604 ZNF790Q6PG37 636 aa10.02□□□□□ -0.81
AP005242.3-201ENST00000623604 WWC1Q8IX03 1113 aa10.02□□□□□ -0.81
AP005242.3-201ENST00000623604 TTC5Q8N0Z6 440 aa10.02□□□□□ -0.81
AP005242.3-201ENST00000623604 FAM163AQ96GL9 167 aaPredicted RBP10.02□□□□□ -0.81
AP005242.3-201ENST00000623604 BABAM1Q9NWV8 329 aa10.02□□□□□ -0.81
AP005242.3-201ENST00000623604 SALL2Q9Y467 1007 aaPredicted RBP10.02□□□□□ -0.81
AP005242.3-201ENST00000623604 PAPPAQ13219 1627 aa10.01□□□□□ -0.81
AP005242.3-201ENST00000623604 LOC102724428A0A0B4J2F2 783 aa10.01□□□□□ -0.81
AP005242.3-201ENST00000623604 SIK1P57059 783 aa10.01□□□□□ -0.81
AP005242.3-201ENST00000623604 WDR63Q8IWG1 891 aa10.01□□□□□ -0.81
AP005242.3-201ENST00000623604 CCNL1Q9UK58 526 aaPredicted RBP10.01□□□□□ -0.81
AP005242.3-201ENST00000623604 CHL1O00533 1208 aa10□□□□□ -0.81
AP005242.3-201ENST00000623604 PTCD1O75127 700 aaKnown RBP10□□□□□ -0.81
AP005242.3-201ENST00000623604 GNAI1P63096 354 aa10□□□□□ -0.81
AP005242.3-201ENST00000623604 PELP1Q8IZL8 1130 aaKnown RBP10□□□□□ -0.81
AP005242.3-201ENST00000623604 FMNL2Q96PY5 1086 aa10□□□□□ -0.81
AP005242.3-201ENST00000623604 IFT57Q9NWB7 429 aa10□□□□□ -0.81
AP005242.3-201ENST00000623604 MIS18AQ9NYP9 233 aa10□□□□□ -0.81
AP005242.3-201ENST00000623604 TSPYL4Q9UJ04 414 aa10□□□□□ -0.81
AP005242.3-201ENST00000623604 UBR2Q8IWV8 1755 aa10□□□□□ -0.81
AP005242.3-201ENST00000623604 IL16Q14005 1332 aa10□□□□□ -0.81
AP005242.3-201ENST00000623604 ZNF831Q5JPB2 1677 aa9.99□□□□□ -0.81
AP005242.3-201ENST00000623604 RREB1Q92766 1687 aa9.99□□□□□ -0.81
AP005242.3-201ENST00000623604 KDM3BQ7LBC6 1761 aa9.99□□□□□ -0.81
AP005242.3-201ENST00000623604 KCNQ3O43525 872 aa9.99□□□□□ -0.81
AP005242.3-201ENST00000623604 ZNF853P0CG23 659 aa9.99□□□□□ -0.81
AP005242.3-201ENST00000623604 ATP6V1AP38606 617 aa9.99□□□□□ -0.81
AP005242.3-201ENST00000623604 ZNF496Q96IT1 587 aaPredicted RBP9.99□□□□□ -0.81
AP005242.3-201ENST00000623604 LRRC4BQ9NT99 713 aa9.99□□□□□ -0.81
AP005242.3-201ENST00000623604 LAS1LQ9Y4W2 734 aaKnown RBP9.99□□□□□ -0.81
AP005242.3-201ENST00000623604 EP400Q96L91 3159 aa9.99□□□□□ -0.81
AP005242.3-201ENST00000623604 TAF1LQ8IZX4 1826 aa9.98□□□□□ -0.81
AP005242.3-201ENST00000623604 KCPQ6ZWJ8 1503 aa9.98□□□□□ -0.81
AP005242.3-201ENST00000623604 POTEJP0CG39 1038 aa9.98□□□□□ -0.81
AP005242.3-201ENST00000623604 NUBP1P53384 320 aa9.98□□□□□ -0.81
AP005242.3-201ENST00000623604 KCNQ4P56696 695 aa9.98□□□□□ -0.81
AP005242.3-201ENST00000623604 EIF4A1P60842 406 aaKnown RBP9.98□□□□□ -0.81
AP005242.3-201ENST00000623604 SLC4A9Q96Q91 983 aa9.98□□□□□ -0.81
AP005242.3-201ENST00000623604 NUP188Q5SRE5 1749 aa9.98□□□□□ -0.81
AP005242.3-201ENST00000623604 HEG1Q9ULI3 1381 aa9.98□□□□□ -0.81
AP005242.3-201ENST00000623604 SNRPA1P09661 255 aaKnown RBP9.97□□□□□ -0.81
AP005242.3-201ENST00000623604 HNRNPUQ00839 825 aaKnown RBP eCLIP9.97□□□□□ -0.81
AP005242.3-201ENST00000623604 NBPF14Q5TI25 921 aa9.97□□□□□ -0.81
AP005242.3-201ENST00000623604 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.97□□□□□ -0.81
AP005242.3-201ENST00000623604 SGIP1Q9BQI5 828 aa9.97□□□□□ -0.81
AP005242.3-201ENST00000623604 TEX13AQ9BXU3 409 aaPredicted RBP9.97□□□□□ -0.81
AP005242.3-201ENST00000623604 MBIPQ9NS73 344 aa9.97□□□□□ -0.81
AP005242.3-201ENST00000623604 ZNF521Q96K83 1311 aa9.97□□□□□ -0.81
AP005242.3-201ENST00000623604 CICQ96RK0 1608 aaPredicted RBP9.96□□□□□ -0.81
AP005242.3-201ENST00000623604 C5P01031 1676 aa9.96□□□□□ -0.81
AP005242.3-201ENST00000623604 GOLGA2Q08379 1002 aa9.96□□□□□ -0.82
AP005242.3-201ENST00000623604 ITPK1Q13572 414 aa9.96□□□□□ -0.82
AP005242.3-201ENST00000623604 DNAJC10Q8IXB1 793 aa9.96□□□□□ -0.82
AP005242.3-201ENST00000623604 RYDENQ9NUL5 291 aaKnown RBP9.96□□□□□ -0.82
AP005242.3-201ENST00000623604 STK32BQ9NY57 414 aa9.96□□□□□ -0.82
AP005242.3-201ENST00000623604 TJP1Q07157 1748 aa9.96□□□□□ -0.82
AP005242.3-201ENST00000623604 STK25O00506 426 aa9.95□□□□□ -0.82
AP005242.3-201ENST00000623604 GIGYF1O75420 1035 aaPredicted RBP9.95□□□□□ -0.82
AP005242.3-201ENST00000623604 STARD3NLO95772 234 aa9.95□□□□□ -0.82
AP005242.3-201ENST00000623604 BRPF1P55201 1214 aaPredicted RBP9.95□□□□□ -0.82
AP005242.3-201ENST00000623604 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
AP005242.3-201ENST00000623604 LINC00116Q8NCU8 138 aa9.95□□□□□ -0.82
AP005242.3-201ENST00000623604 MYH16Q9H6N6 1097 aa9.95□□□□□ -0.82
AP005242.3-201ENST00000623604 COL5A3P25940 1745 aaPredicted RBP9.95□□□□□ -0.82
AP005242.3-201ENST00000623604 C4BP0C0L5 1744 aa9.94□□□□□ -0.82
AP005242.3-201ENST00000623604 CNTNAP4Q9C0A0 1308 aa9.94□□□□□ -0.82
AP005242.3-201ENST00000623604 CYP19A1P11511 503 aaPredicted RBP9.94□□□□□ -0.82
AP005242.3-201ENST00000623604 SLC15A2Q16348 729 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms