RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 HNRNPMP52272 730 aaKnown RBP eCLIP7.4□□□□□ -1.22
ERCC6-209ENST00000623073 MAP7Q14244 749 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 CACNA2D3Q8IZS8 1091 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 PPP1R9BQ96SB3 815 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 SLC3A2P08195 630 aaKnown RBP7.4□□□□□ -1.22
ERCC6-209ENST00000623073 URI1O94763 535 aaPredicted RBP7.4□□□□□ -1.22
ERCC6-209ENST00000623073 PPP1R2P41236 205 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 FKBP15Q5T1M5 1219 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 COG3Q96JB2 828 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 KCNH8Q96L42 1107 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 TCHPQ9BT92 498 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 SLFN5Q08AF3 891 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 PPP2R5EQ16537 467 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 IQSEC3Q9UPP2 1182 aaPredicted RBP7.4□□□□□ -1.22
ERCC6-209ENST00000623073 PDE6BP35913 854 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 WHAMMP3Q1A5X7 153 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 ARHGAP24Q8N264 748 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 FAM76AQ8TAV0 307 aa7.4□□□□□ -1.22
ERCC6-209ENST00000623073 C16orf45Q96MC5 204 aaPredicted RBP7.4□□□□□ -1.22
ERCC6-209ENST00000623073 NOL8Q76FK4 1167 aaKnown RBP7.4□□□□□ -1.23
ERCC6-209ENST00000623073 LRRC27Q9C0I9 530 aa7.4□□□□□ -1.23
ERCC6-209ENST00000623073 ATP5DP30049 168 aa7.4□□□□□ -1.23
ERCC6-209ENST00000623073 RIPK4P57078 832 aa7.4□□□□□ -1.23
ERCC6-209ENST00000623073 ZSCAN23Q3MJ62 389 aa7.4□□□□□ -1.23
ERCC6-209ENST00000623073 NLRP5P59047 1200 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 IRX4P78413 519 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 AEBP2Q6ZN18 517 aaPredicted RBP7.39□□□□□ -1.23
ERCC6-209ENST00000623073 APLFQ8IW19 511 aaPredicted RBP7.39□□□□□ -1.23
ERCC6-209ENST00000623073 KRT83P78385 493 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 SLC4A10Q6U841 1118 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 CCDC155Q8N6L0 562 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 DNAJC8O75937 253 aaPredicted RBP7.39□□□□□ -1.23
ERCC6-209ENST00000623073 VAV2P52735 878 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 ZKSCAN8Q15776 578 aaPredicted RBP7.39□□□□□ -1.23
ERCC6-209ENST00000623073 HMGB3O15347 200 aaKnown RBP7.39□□□□□ -1.23
ERCC6-209ENST00000623073 HMGB2P26583 209 aaKnown RBP7.39□□□□□ -1.23
ERCC6-209ENST00000623073 TRIM14Q14142 442 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 EFCAB13Q8IY85 973 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 BANK1Q8NDB2 785 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 GLRX3O76003 335 aaKnown RBP7.39□□□□□ -1.23
ERCC6-209ENST00000623073 KIF4AO95239 1232 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 GAS2L2Q8NHY3 880 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 SREK1Q8WXA9 508 aaKnown RBP7.39□□□□□ -1.23
ERCC6-209ENST00000623073 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.39□□□□□ -1.23
ERCC6-209ENST00000623073 FAM114A2Q9NRY5 505 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 PPP2R1AP30153 589 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 P3H4Q92791 437 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 THEGQ9P2T0 379 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 POTEJP0CG39 1038 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 SLFNL1Q499Z3 407 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 LRCH2Q5VUJ6 765 aa7.39□□□□□ -1.23
ERCC6-209ENST00000623073 SRGAP3O43295 1099 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 SKILP12757 684 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 TCP11L2Q8N4U5 519 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 JAKMIP2Q96AA8 810 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 RASSF2P50749 326 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 CECR2Q9BXF3 1484 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 CTAGE9A4FU28 777 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 INPP5BP32019 993 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 HSP90AA5PQ58FG0 334 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 FOXD4L5Q5VV16 416 aaPredicted RBP7.38□□□□□ -1.23
ERCC6-209ENST00000623073 FOXD4L4Q8WXT5 416 aaPredicted RBP7.38□□□□□ -1.23
ERCC6-209ENST00000623073 DNAI2Q9GZS0 605 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 BCAP29Q9UHQ4 241 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 HDAC9Q9UKV0 1011 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 KCNG4Q8TDN1 519 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 ANKRD24Q8TF21 1146 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 CYLC1P35663 651 aaPredicted RBP7.38□□□□□ -1.23
ERCC6-209ENST00000623073 RUFY4Q6ZNE9 571 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 ZNF365Q70YC5 407 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 PHLDB2Q86SQ0 1253 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 PANK1Q8TE04 598 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 RMND1Q9NWS8 449 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 RASAL2Q9UJF2 1139 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 SUPT6HQ7KZ85 1726 aaKnown RBP7.38□□□□□ -1.23
ERCC6-209ENST00000623073 SMARCA4P51532 1647 aa7.38□□□□□ -1.23
ERCC6-209ENST00000623073 NACAP1Q9BZK3 213 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 U3KPZ7 1027 aaPredicted RBP7.37□□□□□ -1.23
ERCC6-209ENST00000623073 SOS1Q07889 1333 aaPredicted RBP7.37□□□□□ -1.23
ERCC6-209ENST00000623073 DTNBP1Q96EV8 351 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 SEC62Q99442 399 aaKnown RBP7.37□□□□□ -1.23
ERCC6-209ENST00000623073 TRIM7Q9C029 511 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 VCX3BQ9H321 246 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 PDRG1Q9NUG6 133 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 SAMD15Q9P1V8 674 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 TBC1D2BQ9UPU7 963 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 KRT86O43790 486 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 RAB34Q9BZG1 259 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 NCOA2Q15596 1464 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 SETDB1Q15047 1291 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 NBPF9Q3BBW0 867 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 RNF187Q5TA31 235 aaPredicted RBP7.37□□□□□ -1.23
ERCC6-209ENST00000623073 NFXL1Q6ZNB6 911 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 CNGA4Q8IV77 575 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 CWC25Q9NXE8 425 aaPredicted RBP7.37□□□□□ -1.23
ERCC6-209ENST00000623073 RNF123Q5XPI4 1314 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 CCDC27Q2M243 656 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 LRRC45Q96CN5 670 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 LMBR1Q8WVP7 490 aa7.37□□□□□ -1.23
ERCC6-209ENST00000623073 VCX3AQ9NNX9 186 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms